Miyakogusa Predicted Gene

Lj4g3v2179230.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2179230.1 Non Characterized Hit- tr|I3SD19|I3SD19_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,98.79,0,FYVE/PHD
zinc finger,Zinc finger, FYVE/PHD-type; PHD zinc finger,Zinc finger,
PHD-type; ZF_PHD_1,Zin,CUFF.50424.1
         (248 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g040990.1 | PHD finger alfin-like protein | HC | chr2:1796...   319   2e-87
Medtr8g019520.1 | alfin-like transcription factor | HC | chr8:68...   317   8e-87
Medtr8g019520.2 | alfin-like transcription factor | HC | chr8:68...   315   3e-86
Medtr4g134510.1 | PHD finger alfin-like protein | HC | chr4:5632...   308   3e-84
Medtr1g015185.1 | PHD finger alfin-like protein | HC | chr1:3751...   307   7e-84
Medtr2g099500.1 | PHD finger alfin-like protein | HC | chr2:4265...   287   6e-78
Medtr4g015830.1 | PHD finger alfin-like protein | HC | chr4:4791...   261   4e-70
Medtr7g068590.1 | PHD finger alfin-like protein | HC | chr7:2513...   255   2e-68
Medtr1g015185.2 | PHD finger alfin-like protein | HC | chr1:3751...   217   7e-57
Medtr8g066480.1 | PHD6, putative | HC | chr8:27655204-27653875 |...   111   7e-25

>Medtr2g040990.1 | PHD finger alfin-like protein | HC |
           chr2:17960762-17956593 | 20130731
          Length = 253

 Score =  319 bits (817), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 157/241 (65%), Positives = 179/241 (74%), Gaps = 3/241 (1%)

Query: 10  PRTVEEIFKDFMGRRAAMIKALTTDVQEFYQLCNPEKENLCLYGFPNEQWXXXXXXXXXX 69
           PRTVE +F+DF GRRA +IKALTTDV++FYQ C+PEKENL LYG+P E W          
Sbjct: 12  PRTVEAVFRDFKGRRAGLIKALTTDVEDFYQQCDPEKENLSLYGYPGELWEVTLPAEEVP 71

Query: 70  XXXXXXXXGINFARDGMQDKDWLSLVAVHSDAWLLSVAFFYGARFGFDKATRKRLYALIN 129
                   GINFARDGMQ+KDWLSLVAVHSD WLLSVAF++GARFGFDKA RKRL+ LIN
Sbjct: 72  PELPEPALGINFARDGMQEKDWLSLVAVHSDTWLLSVAFYFGARFGFDKADRKRLFTLIN 131

Query: 130 DLPTIFEVVTETAEKQAKEKSSVSNIASNNTKTSSKAGGSESVKYLK-QVKXXXXXXXXX 188
           DLPTIFEVVT +A+KQ KEK SVS+  S  +K+ SKA GSE  KY K   K         
Sbjct: 132 DLPTIFEVVTGSAKKQTKEKPSVSSHNSIKSKSGSKARGSELAKYSKPPAKEDDEGVDDE 191

Query: 189 XHGETLCGACGENY--ASDEFWICCDICENWFHGKCVKITPARAEHIKHYKCPSCSSKRV 246
              +  C ACGE+Y  ASDEFWICCDICE W+HGKCVKITPARAEHIK YKCP+C++KRV
Sbjct: 192 EEDQGECAACGESYVSASDEFWICCDICEKWYHGKCVKITPARAEHIKQYKCPACNNKRV 251

Query: 247 R 247
           R
Sbjct: 252 R 252


>Medtr8g019520.1 | alfin-like transcription factor | HC |
           chr8:6883372-6878935 | 20130731
          Length = 256

 Score =  317 bits (811), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 158/247 (63%), Positives = 187/247 (75%), Gaps = 9/247 (3%)

Query: 10  PRTVEEIFKDFMGRRAAMIKALTTDVQEFYQLCNPEKENLCLYGFPNEQWXXXXXXXXXX 69
           PRTVEE+F+DF GRRA +IKALTTDV+EFY  C+PEKENLCLYGFP+EQW          
Sbjct: 9   PRTVEEVFRDFKGRRAGLIKALTTDVEEFYTQCDPEKENLCLYGFPSEQWEVNLPAEEVP 68

Query: 70  XXXXXXXXGINFARDGMQDKDWLSLVAVHSDAWLLSVAFFYGARFGFDKATRKRLYALIN 129
                   GINFARDGMQ+KDWLSLVAVHSD+WL+++A+++GARFGFDK+ RKRL+ +IN
Sbjct: 69  PELPEPVLGINFARDGMQEKDWLSLVAVHSDSWLIAIAYYFGARFGFDKSDRKRLFNMIN 128

Query: 130 DLPTIFEVVTETAEKQAKEKSSVSNIASNNTKTSSKAGGSE-SVKYLKQVKXXX------ 182
           DLP+I+EVVT  A+KQ KEKSSVSN + + +K+SSKA   E  VK  K ++         
Sbjct: 129 DLPSIYEVVTGAAKKQVKEKSSVSNHSGSKSKSSSKARAPEPQVKQTKPLELPKDDEVEE 188

Query: 183 -XXXXXXXHGETLCGACGENYASDEFWICCDICENWFHGKCVKITPARAEHIKHYKCPSC 241
                   HGETLCGACGE+Y +DEFWICCDICE WFHGKCVKITPARAEHIK YKCPSC
Sbjct: 189 LDEEDEDEHGETLCGACGEHYGTDEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSC 248

Query: 242 S-SKRVR 247
           S +KR R
Sbjct: 249 SNNKRAR 255


>Medtr8g019520.2 | alfin-like transcription factor | HC |
           chr8:6883362-6878948 | 20130731
          Length = 257

 Score =  315 bits (806), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 157/249 (63%), Positives = 187/249 (75%), Gaps = 12/249 (4%)

Query: 10  PRTVEEIFKDFMGRRAAMIKALTTDVQEFYQLCNPEKENLCLYGFPNEQWXXXXXXXXXX 69
           PRTVEE+F+DF GRRA +IKALTTDV+EFY  C+PEKENLCLYGFP+EQW          
Sbjct: 9   PRTVEEVFRDFKGRRAGLIKALTTDVEEFYTQCDPEKENLCLYGFPSEQWEVNLPAEEVP 68

Query: 70  XXXXXXXXGINFARDGMQDKDWLSLVAVHSDAWLLSVAFFYGARFGFDKATRKRLYALIN 129
                   GINFARDGMQ+KDWLSLVAVHSD+WL+++A+++GARFGFDK+ RKRL+ +IN
Sbjct: 69  PELPEPVLGINFARDGMQEKDWLSLVAVHSDSWLIAIAYYFGARFGFDKSDRKRLFNMIN 128

Query: 130 DLPTIFEVVTETAEKQAKEKSSVSNIASNNTKTSSKAGGSESVKYLKQVKXXXXXX---- 185
           DLP+I+EVVT  A+KQ KEKSSVSN + + +K+SSKA  +   + +KQ K          
Sbjct: 129 DLPSIYEVVTGAAKKQVKEKSSVSNHSGSKSKSSSKAQRAPEPQ-VKQTKPLELPKDDEV 187

Query: 186 ------XXXXHGETLCGACGENYASDEFWICCDICENWFHGKCVKITPARAEHIKHYKCP 239
                     HGETLCGACGE+Y +DEFWICCDICE WFHGKCVKITPARAEHIK YKCP
Sbjct: 188 EELDEEDEDEHGETLCGACGEHYGTDEFWICCDICEKWFHGKCVKITPARAEHIKQYKCP 247

Query: 240 SCS-SKRVR 247
           SCS +KR R
Sbjct: 248 SCSNNKRAR 256


>Medtr4g134510.1 | PHD finger alfin-like protein | HC |
           chr4:56329915-56334966 | 20130731
          Length = 256

 Score =  308 bits (789), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 153/257 (59%), Positives = 182/257 (70%), Gaps = 11/257 (4%)

Query: 1   MEAAAARSIPRTVEEIFKDFMGRRAAMIKALTTDVQEFYQLCNPEKENLCLYGFPNEQWX 60
           ME  A   +PRTVEE+F D+ GRRA +IKALTTDV++FYQLC+PEKENLCLYGFPNE W 
Sbjct: 1   MEGMAQHPVPRTVEEVFSDYKGRRAGLIKALTTDVEKFYQLCDPEKENLCLYGFPNETWE 60

Query: 61  XXXXXXXXXXXXXXXXXGINFARDGMQDKDWLSLVAVHSDAWLLSVAFFYGARFGFDKAT 120
                            GINFARDGMQ+KDWLSLVAVHSD+WLL+VAF++GARFGF K  
Sbjct: 61  VNLPVEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKND 120

Query: 121 RKRLYALINDLPTIFEVVTETAEKQAKEKSSVSNIASNNT-KTSSKAGGSES----VKYL 175
           RKRL+ +INDLPT+FE+ T TA KQ+K++ +  N  SN+  K+S K+  SES    VK  
Sbjct: 121 RKRLFQMINDLPTVFELATGTA-KQSKDQLTAHNNGSNSKYKSSGKSRQSESQTKGVKMS 179

Query: 176 KQVK----XXXXXXXXXXHGETLCGACGENYASDEFWICCDICENWFHGKCVKITPARAE 231
             VK               G T CGACG+NY +DEFWICCD+CE WFHGKCVKITPA+AE
Sbjct: 180 APVKEEVDSGEEEEDDDEQGAT-CGACGDNYGTDEFWICCDMCEKWFHGKCVKITPAKAE 238

Query: 232 HIKHYKCPSCSSKRVRV 248
           HIK YKCP CS K+ R+
Sbjct: 239 HIKQYKCPGCSIKKPRI 255


>Medtr1g015185.1 | PHD finger alfin-like protein | HC |
           chr1:3751255-3746618 | 20130731
          Length = 263

 Score =  307 bits (786), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 162/263 (61%), Positives = 185/263 (70%), Gaps = 17/263 (6%)

Query: 1   MEAAAARSIPRTVEEIFKDFMGRRAAMIKALTTDVQEFYQLCNPEKENLCLYGFPNEQWX 60
           M+   A   PRTVEE+F+DF GRRAA+IKALTTDV  FYQ C+PEKENLCLYGFP+EQW 
Sbjct: 1   MDVVGAPYNPRTVEEVFRDFKGRRAALIKALTTDVDVFYQQCDPEKENLCLYGFPSEQWE 60

Query: 61  XXXXXXXXXXXXXXXXXGINFARDGMQDKDWLSLVAVHSDAWLLSVAFFYGARFGFDKAT 120
                            GINFARDGMQ+KDWLSLVAVHSDAWLLSVAF++GARFGFDKA 
Sbjct: 61  VNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLSVAFYFGARFGFDKAD 120

Query: 121 RKRLYALINDLPTIFEVVTETAEKQAKEKSSVSNIASNNTKTSSKAGGSESVKYLKQVKX 180
           RKRL+ +INDLPTIFE VT +  KQ KEK SVSN +S  +K++SK       K+ K +  
Sbjct: 121 RKRLFNMINDLPTIFEAVTGSGRKQGKEK-SVSNNSSTKSKSNSKRSSEPQPKFSKPMAM 179

Query: 181 XXXXXXX----------------XXHGETLCGACGENYASDEFWICCDICENWFHGKCVK 224
                                    HGETLCGACG++YA+DEFWICCDICE WFHGKCVK
Sbjct: 180 AMQMQSKDEVEDEDGVGVDEEDEEEHGETLCGACGDSYAADEFWICCDICEKWFHGKCVK 239

Query: 225 ITPARAEHIKHYKCPSCSSKRVR 247
           ITPARAEHIK YKCP+CS+KR R
Sbjct: 240 ITPARAEHIKQYKCPACSNKRAR 262


>Medtr2g099500.1 | PHD finger alfin-like protein | HC |
           chr2:42658288-42662190 | 20130731
          Length = 250

 Score =  287 bits (735), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 149/245 (60%), Positives = 173/245 (70%), Gaps = 8/245 (3%)

Query: 11  RTVEEIFKDFMGRRAAMIKALTTDVQEFYQLCNPEKENLCLYGFPNEQWXXXXXXXXXXX 70
           RTVE+IF DF  RR  +IKALT DV++FY+ C+PEKENLCLYG  NE W           
Sbjct: 6   RTVEQIFDDFKSRRTGIIKALTVDVEDFYRQCDPEKENLCLYGLLNENWEVNLPVEEVPP 65

Query: 71  XXXXXXXGINFARDGMQDKDWLSLVAVHSDAWLLSVAFFYGARFGFDKATRKRLYALIND 130
                  GINFARDGMQ+KDWL+LVAVHSD WLLS+AF++GARFGFDKA RKRL+ LIN+
Sbjct: 66  EIPEPVLGINFARDGMQEKDWLALVAVHSDTWLLSLAFYFGARFGFDKADRKRLFNLINE 125

Query: 131 LPTIFEVVTETAEKQAKEKSSVSNIASNNTKTSSKAGGSE-------SVKYLKQVKXXXX 183
           LPT+FEVVT  A+KQ KEKSSVSN + + +K+SSKA   E       +    K  +    
Sbjct: 126 LPTVFEVVTGAAKKQVKEKSSVSNNSGSKSKSSSKARAPEAQSRQPKAALLPKDEEEELE 185

Query: 184 XXXXXXHGETLCGACGENYASDEFWICCDICENWFHGKCVKITPARAEHIKHYKCPSCSS 243
                  GE  CGACG++  +DEFWICCDICE WFHGKCVKITPARAEHIK YKCPSCSS
Sbjct: 186 EQDDDEQGEATCGACGDSNGADEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSCSS 245

Query: 244 -KRVR 247
            KR R
Sbjct: 246 NKRAR 250


>Medtr4g015830.1 | PHD finger alfin-like protein | HC |
           chr4:4791805-4787747 | 20130731
          Length = 240

 Score =  261 bits (667), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 137/248 (55%), Positives = 166/248 (66%), Gaps = 10/248 (4%)

Query: 1   MEAAAARSIPRTVEEIFKDFMGRRAAMIKALTTDVQEFYQLCNPEKENLCLYGFPNEQWX 60
           ME A++   PRTVEEIFKDF  RR  +++ALT DV EFY LC+P+K+NLCLYG  NE W 
Sbjct: 1   MEMASS---PRTVEEIFKDFSSRRDGIVRALTQDVDEFYALCDPDKDNLCLYGHTNESWE 57

Query: 61  XXXXXXXXXXXXXXXXXGINFARDGMQDKDWLSLVAVHSDAWLLSVAFFYGARFGFDKAT 120
                            GINFARDGM  +DWLSLVAVHSD+WLLSVAF+ GAR   ++  
Sbjct: 58  VTLPAEEVPPELPEPALGINFARDGMNRRDWLSLVAVHSDSWLLSVAFYLGARL--NRNE 115

Query: 121 RKRLYALINDLPTIFEVVTETAEKQAKEKSSVSNIASNNTKTSSKAGGSESVKY-LKQVK 179
           RKRL++LIN+LPT+FEVVT+   K  K+K +V   + + ++ S+K      VK   K V 
Sbjct: 116 RKRLFSLINELPTVFEVVTD--RKPIKDKPTVD--SGSKSRGSTKRSSDGQVKSNPKLVD 171

Query: 180 XXXXXXXXXXHGETLCGACGENYASDEFWICCDICENWFHGKCVKITPARAEHIKHYKCP 239
                     H ETLCG+CG NY +DEFWI CDICE W+HGKCVKITPA+AE IK YKCP
Sbjct: 172 DQGYEEEEDEHSETLCGSCGGNYNADEFWIGCDICERWYHGKCVKITPAKAESIKQYKCP 231

Query: 240 SCSSKRVR 247
           SCS KR R
Sbjct: 232 SCSIKRGR 239


>Medtr7g068590.1 | PHD finger alfin-like protein | HC |
           chr7:25139885-25143273 | 20130731
          Length = 242

 Score =  255 bits (652), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 132/248 (53%), Positives = 163/248 (65%), Gaps = 8/248 (3%)

Query: 1   MEAAAARSIPRTVEEIFKDFMGRRAAMIKALTTDVQEFYQLCNPEKENLCLYGFPNEQWX 60
           ME A++   PRTVEEIFKD+  RR A+++ALT DV EFY LC+P+K+NLCLYG  NE W 
Sbjct: 1   MEMASS---PRTVEEIFKDYSARRIAVVRALTQDVDEFYGLCDPDKDNLCLYGHNNESWE 57

Query: 61  XXXXXXXXXXXXXXXXXGINFARDGMQDKDWLSLVAVHSDAWLLSVAFFYGARFGFDKAT 120
                            GINFARDGM  +DWLSLVAVHSD+WLLSVAF+ GAR   ++  
Sbjct: 58  VTLPAEEVPPELPEPALGINFARDGMNRRDWLSLVAVHSDSWLLSVAFYLGARL--NRNE 115

Query: 121 RKRLYALINDLPTIFEVVTETAE-KQAKEKSSVSNIASNNTKTSSKAGGSESVKYLKQVK 179
           RKRL++LIN+LPT+FE+VT+    K  K  +   + +  +TK SS      + K+   V 
Sbjct: 116 RKRLFSLINELPTVFEIVTDRKPIKDNKPAADSGSKSRGSTKRSSDGQVKSNPKF--PVD 173

Query: 180 XXXXXXXXXXHGETLCGACGENYASDEFWICCDICENWFHGKCVKITPARAEHIKHYKCP 239
                     H ETLCG+CG NY +DEFWI CDICE W+HGKCVKITPA+AE IK YKCP
Sbjct: 174 DGYEEEEEDEHSETLCGSCGGNYNADEFWIGCDICERWYHGKCVKITPAKAESIKQYKCP 233

Query: 240 SCSSKRVR 247
            CS +R R
Sbjct: 234 QCSIRRNR 241


>Medtr1g015185.2 | PHD finger alfin-like protein | HC |
           chr1:3751249-3746646 | 20130731
          Length = 206

 Score =  217 bits (553), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 103/150 (68%), Positives = 115/150 (76%)

Query: 1   MEAAAARSIPRTVEEIFKDFMGRRAAMIKALTTDVQEFYQLCNPEKENLCLYGFPNEQWX 60
           M+   A   PRTVEE+F+DF GRRAA+IKALTTDV  FYQ C+PEKENLCLYGFP+EQW 
Sbjct: 1   MDVVGAPYNPRTVEEVFRDFKGRRAALIKALTTDVDVFYQQCDPEKENLCLYGFPSEQWE 60

Query: 61  XXXXXXXXXXXXXXXXXGINFARDGMQDKDWLSLVAVHSDAWLLSVAFFYGARFGFDKAT 120
                            GINFARDGMQ+KDWLSLVAVHSDAWLLSVAF++GARFGFDKA 
Sbjct: 61  VNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLSVAFYFGARFGFDKAD 120

Query: 121 RKRLYALINDLPTIFEVVTETAEKQAKEKS 150
           RKRL+ +INDLPTIFE VT +  KQ KEKS
Sbjct: 121 RKRLFNMINDLPTIFEAVTGSGRKQGKEKS 150


>Medtr8g066480.1 | PHD6, putative | HC | chr8:27655204-27653875 |
           20130731
          Length = 152

 Score =  111 bits (277), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 69/129 (53%), Positives = 82/129 (63%), Gaps = 14/129 (10%)

Query: 121 RKRLYALINDLPTIFEVVTETAEKQAKEKSSVSNIASNNTKTSSKAGGSESVKYLK-QVK 179
           RKRL+  INDLPTIFEVVT +A+KQ KEK SVS+  SN +K+ SKA GSE  KY K   K
Sbjct: 29  RKRLFTPINDLPTIFEVVTGSAKKQTKEKPSVSSHNSNKSKSGSKARGSELAKYSKPPAK 88

Query: 180 XXXXXXXXXXHGETLCGACGENYASDEFWICCDICENWFHGKCV-KITPARAEHIKHYKC 238
                       +  C ACGENY S            W+HGKCV KITPA+AE IK Y+C
Sbjct: 89  EDDEEVDDEEEYQGECTACGENYVS------------WYHGKCVKKITPAQAEQIKQYRC 136

Query: 239 PSCSSKRVR 247
           P+C++KRVR
Sbjct: 137 PTCNNKRVR 145