Miyakogusa Predicted Gene

Lj4g3v2174020.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2174020.1 Non Characterized Hit- tr|Q5ZB13|Q5ZB13_ORYSJ
Putative uncharacterized protein OSJNBb0024F06.3
OS=Or,56.41,0.00000000000001,zf-LYAR,Zinc finger, C2H2, LYAR-type;
zf-met,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
,CUFF.50414.1
         (137 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g125720.1 | zinc ion-binding protein | HC | chr4:52172186-...   253   3e-68
Medtr4g125720.2 | zinc ion-binding protein | HC | chr4:52172186-...   250   2e-67

>Medtr4g125720.1 | zinc ion-binding protein | HC |
           chr4:52172186-52176253 | 20130731
          Length = 294

 Score =  253 bits (647), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 117/137 (85%), Positives = 125/137 (91%)

Query: 1   MVWFQCEDCGDNLKKPKLPSHFRTCSAYKLSCIDCGQIFGRDTVQDHTQCITEAEKYGPK 60
           MVWFQCEDCGDNLKKPKLP+HFR+C A KLSCIDCGQ+FGRDTVQ+HTQCITEAEKYGPK
Sbjct: 1   MVWFQCEDCGDNLKKPKLPNHFRSCPANKLSCIDCGQMFGRDTVQNHTQCITEAEKYGPK 60

Query: 61  GQGKTVNNAAAKPNKDSKQKPEVDINVGLSERPPWFCSLCNTKATSKQALLLHADGKKHR 120
           GQGKT+N AA+KP KD KQ+P VDINVGLSERPPWFCSLCNTKATSKQALLLHA+GKKH 
Sbjct: 61  GQGKTLNAAASKPIKDGKQRPVVDINVGLSERPPWFCSLCNTKATSKQALLLHAEGKKHG 120

Query: 121 VKARAFLASKQQPVQAD 137
            KAR F ASKQ PVQ D
Sbjct: 121 AKARMFHASKQPPVQTD 137


>Medtr4g125720.2 | zinc ion-binding protein | HC |
           chr4:52172186-52176253 | 20130731
          Length = 253

 Score =  250 bits (639), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 117/137 (85%), Positives = 125/137 (91%)

Query: 1   MVWFQCEDCGDNLKKPKLPSHFRTCSAYKLSCIDCGQIFGRDTVQDHTQCITEAEKYGPK 60
           MVWFQCEDCGDNLKKPKLP+HFR+C A KLSCIDCGQ+FGRDTVQ+HTQCITEAEKYGPK
Sbjct: 1   MVWFQCEDCGDNLKKPKLPNHFRSCPANKLSCIDCGQMFGRDTVQNHTQCITEAEKYGPK 60

Query: 61  GQGKTVNNAAAKPNKDSKQKPEVDINVGLSERPPWFCSLCNTKATSKQALLLHADGKKHR 120
           GQGKT+N AA+KP KD KQ+P VDINVGLSERPPWFCSLCNTKATSKQALLLHA+GKKH 
Sbjct: 61  GQGKTLNAAASKPIKDGKQRPVVDINVGLSERPPWFCSLCNTKATSKQALLLHAEGKKHG 120

Query: 121 VKARAFLASKQQPVQAD 137
            KAR F ASKQ PVQ D
Sbjct: 121 AKARMFHASKQPPVQTD 137