Miyakogusa Predicted Gene

Lj4g3v2172590.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2172590.2 Non Characterized Hit- tr|I3S286|I3S286_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,98.28,0,seg,NULL;
NUCLEOSOME ASSEMBLY PROTEIN,NULL; TESTIS-SPECIFIC Y-ENCODED
PROTEIN,Nucleosome assembly pr,CUFF.50551.2
         (232 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g039680.1 | nucleosome assembly protein | HC | chr2:173935...   270   7e-73
Medtr2g039680.2 | nucleosome assembly protein | HC | chr2:173935...   256   2e-68
Medtr2g099940.1 | nucleosome assembly protein | HC | chr2:428670...   225   2e-59
Medtr2g039697.1 | nucleosome assembly protein | LC | chr2:174078...   192   2e-49
Medtr2g039700.1 | nucleosome assembly protein | LC | chr2:174129...   173   1e-43

>Medtr2g039680.1 | nucleosome assembly protein | HC |
           chr2:17393561-17389420 | 20130731
          Length = 368

 Score =  270 bits (691), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 140/238 (58%), Positives = 160/238 (67%), Gaps = 6/238 (2%)

Query: 1   MKNNEVLAEEISERDEAALKYLKDIKWFRVEDPKGFKLEFYFDTNPYFTNTVLTKTYHMI 60
           MKNN+VL+EE++ERDEAALK+LKDIKW R++DPKGFKLEF+FDTNPYF+N++LTKTYHM+
Sbjct: 131 MKNNDVLSEEVTERDEAALKFLKDIKWSRIDDPKGFKLEFFFDTNPYFSNSILTKTYHMV 190

Query: 61  DEDEPILEKAIGTDIQWHPGXXXXXXXXXXXXXXXXXXXXPITKTEDCESFFNFFSPPQV 120
           DEDEPILEKAIGT+IQW PG                    PITKTE CESFFNFF+PP+V
Sbjct: 191 DEDEPILEKAIGTEIQWLPGKCLTQKVLKKKPKKGAKNAKPITKTETCESFFNFFNPPEV 250

Query: 121 PXXXXXXXXXXXXXLQNQMEQDYDIGSTIKDKIIPHAVSWFTGEANQGEEFGEL------ 174
           P             LQNQMEQDYDIGSTI+DKIIPHAVSWFTGEA QGEEFG+L      
Sbjct: 251 PEDDEDIDEDMAEELQNQMEQDYDIGSTIRDKIIPHAVSWFTGEAAQGEEFGDLDDEDDD 310

Query: 175 XXXXXXXXXXXXXXXXXXXXXXXXXSKPKMESSAHKKGGRAQLGDGPQGERPPECKQQ 232
                                         + S+ KK G AQLG+G QGERPPECKQQ
Sbjct: 311 EDDDAEDDDEDEDEDEDEDDDEDEEETKTKKKSSAKKSGIAQLGEGQQGERPPECKQQ 368


>Medtr2g039680.2 | nucleosome assembly protein | HC |
           chr2:17393561-17389420 | 20130731
          Length = 343

 Score =  256 bits (653), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 120/174 (68%), Positives = 137/174 (78%)

Query: 1   MKNNEVLAEEISERDEAALKYLKDIKWFRVEDPKGFKLEFYFDTNPYFTNTVLTKTYHMI 60
           MKNN+VL+EE++ERDEAALK+LKDIKW R++DPKGFKLEF+FDTNPYF+N++LTKTYHM+
Sbjct: 131 MKNNDVLSEEVTERDEAALKFLKDIKWSRIDDPKGFKLEFFFDTNPYFSNSILTKTYHMV 190

Query: 61  DEDEPILEKAIGTDIQWHPGXXXXXXXXXXXXXXXXXXXXPITKTEDCESFFNFFSPPQV 120
           DEDEPILEKAIGT+IQW PG                    PITKTE CESFFNFF+PP+V
Sbjct: 191 DEDEPILEKAIGTEIQWLPGKCLTQKVLKKKPKKGAKNAKPITKTETCESFFNFFNPPEV 250

Query: 121 PXXXXXXXXXXXXXLQNQMEQDYDIGSTIKDKIIPHAVSWFTGEANQGEEFGEL 174
           P             LQNQMEQDYDIGSTI+DKIIPHAVSWFTGEA QGEEFG+L
Sbjct: 251 PEDDEDIDEDMAEELQNQMEQDYDIGSTIRDKIIPHAVSWFTGEAAQGEEFGDL 304


>Medtr2g099940.1 | nucleosome assembly protein | HC |
           chr2:42867059-42870999 | 20130731
          Length = 367

 Score =  225 bits (574), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 116/237 (48%), Positives = 141/237 (59%), Gaps = 5/237 (2%)

Query: 1   MKNNEVLAEEISERDEAALKYLKDIKWFRVEDPKGFKLEFYFDTNPYFTNTVLTKTYHMI 60
           MK NE+L EEI+ERDE ALKYLKDIKW ++++PKGFKLEFYFD+NPYF N+VLTKTYHMI
Sbjct: 131 MKTNEILGEEITERDEEALKYLKDIKWSKLDNPKGFKLEFYFDSNPYFQNSVLTKTYHMI 190

Query: 61  DEDEPILEKAIGTDIQWHPGXXXXXXXXXXXXXXXXXXXXPITKTEDCESFFNFFSPPQV 120
           ++D+PILEK+IGT+I+WHPG                    PI KTE C+SFFN F+PP +
Sbjct: 191 EDDDPILEKSIGTEIEWHPGKCLTQKVMKKKPKKGSKNAKPIIKTEKCDSFFNIFNPPHI 250

Query: 121 PXXXXXXXXXXXXXLQNQMEQDYDIGSTIKDKIIPHAVSWFTGEANQGEEFGELXXXXXX 180
           P             LQN ME DYDIGSTI+DKIIPHAVSWFTGEA + +           
Sbjct: 251 PEDDDEIDDDVVEELQNLMEHDYDIGSTIRDKIIPHAVSWFTGEAGESDFDDIEVDEDDE 310

Query: 181 XXXXXXXXXXXXXXXXXXXSKPKME-----SSAHKKGGRAQLGDGPQGERPPECKQQ 232
                                 + E      S  K+G +A+ G     ERP +CKQQ
Sbjct: 311 DGDEEDDDDDDDDDDDEEDEDDEEEDEGKGKSKSKRGSKAKPGKDQSTERPADCKQQ 367


>Medtr2g039697.1 | nucleosome assembly protein | LC |
           chr2:17407843-17405503 | 20130731
          Length = 317

 Score =  192 bits (489), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 94/165 (56%), Positives = 114/165 (69%), Gaps = 1/165 (0%)

Query: 1   MKNNEVLAEEISERDEAALKYLKDIKWFRVEDPKGFKLEFYFDTNPYFTNTVLTKTYHMI 60
           +KNNEV+A+ I++RDE ALKYLKDIK+ ++ +P GFKLEF+FD NPYF+NTVLTKTYHM+
Sbjct: 132 LKNNEVVADVITDRDEEALKYLKDIKYTKMVEPLGFKLEFFFDPNPYFSNTVLTKTYHML 191

Query: 61  DEDEPILEKAIGTDIQWHPGXXXXXXXXXXXXXXXXXXXXPITKTEDCESFFNFFSPPQV 120
           DEDEP+LE+A GT I W P                     P+  T  CESFFNFF PP++
Sbjct: 192 DEDEPLLERAFGTVINWLP-EKSLTKIANEKQKNDLKNVEPVIDTPPCESFFNFFDPPEI 250

Query: 121 PXXXXXXXXXXXXXLQNQMEQDYDIGSTIKDKIIPHAVSWFTGEA 165
           P             LQ+ ME+DYDIGSTI+DKIIPHAV WFTGEA
Sbjct: 251 PENDVDIDEDACYELQDVMERDYDIGSTIRDKIIPHAVVWFTGEA 295


>Medtr2g039700.1 | nucleosome assembly protein | LC |
           chr2:17412959-17410932 | 20130731
          Length = 347

 Score =  173 bits (438), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 93/169 (55%), Positives = 120/169 (71%), Gaps = 7/169 (4%)

Query: 1   MKNNEVLAEEISERDEAALKYLKDIKWFRVEDPKGFKLEFYFDTNPYFTNTVLTKTYHMI 60
           ++NN+ +A+EI+ERDE ALKYLKDIK+ R  +P+GFKLEF+FD+NPYF+NT+LTKTYHM+
Sbjct: 135 LQNNDEIADEITERDEDALKYLKDIKYTRTTEPQGFKLEFFFDSNPYFSNTILTKTYHMV 194

Query: 61  DEDEPILEKAIGTDIQWHPGXXXXXXXXXXXXXXXXXXXXPITKTEDCESFFNFFSPPQV 120
           DEDE I+EKAIGT+I+W PG                       +TE  +SFFNFF+  ++
Sbjct: 195 DEDEFIMEKAIGTEIEWLPGKSLTEKKDPNTAKQT-------IETEKFDSFFNFFNSLEI 247

Query: 121 PXXXXXXXXXXXXXLQNQMEQDYDIGSTIKDKIIPHAVSWFTGEANQGE 169
           P             LQN+ME DYDIGSTI+DKIIP+AVSW+TGEA+ GE
Sbjct: 248 PKDGMGVDEEADEELQNEMEHDYDIGSTIRDKIIPNAVSWYTGEASDGE 296