Miyakogusa Predicted Gene

Lj4g3v2172500.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2172500.1 Non Characterized Hit- tr|I1K1E6|I1K1E6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.56592
PE,61.45,8e-19,Q9SBR6_MEDVA_Q9SBR6;,Early nodulin 93 ENOD93 protein;
seg,NULL; ENOD93,Early nodulin 93 ENOD93 prote,CUFF.50382.1
         (120 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g007360.1 | early nodulin 93 | HC | chr1:305370-301574 | 2...   176   4e-45
Medtr3g110390.1 | early nodulin 93 | HC | chr3:51579779-51577895...   151   1e-37
Medtr3g110390.2 | early nodulin 93 | HC | chr3:51579731-51577943...   145   1e-35
Medtr4g113820.1 | early nodulin 93 | HC | chr4:46845878-46846953...    84   4e-17

>Medtr1g007360.1 | early nodulin 93 | HC | chr1:305370-301574 |
           20130731
          Length = 120

 Score =  176 bits (447), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 84/114 (73%), Positives = 94/114 (82%), Gaps = 1/114 (0%)

Query: 1   MGIPSELRDLWVSKTKTPFLIASPAEESKLLRSKQCTNEGVRAGLKAATIACVASAVPTL 60
           MGIPSELRD WVSK +  F+IASP EE K+LR+K+CTNEGVRAG KAA +ACV S VPTL
Sbjct: 1   MGIPSELRDAWVSK-RNSFIIASPDEERKILRTKKCTNEGVRAGFKAAAVACVVSTVPTL 59

Query: 61  AAVRMIPWAKANLNYTAQALXXXXXXXXXYFIVADKTILECARKNARLQDSLRH 114
           AAVRM+PWAKANLNYTAQAL         YFI ADKTILECARKNA+L++SLRH
Sbjct: 60  AAVRMVPWAKANLNYTAQALIISAASIAAYFITADKTILECARKNAQLENSLRH 113


>Medtr3g110390.1 | early nodulin 93 | HC | chr3:51579779-51577895 |
           20130731
          Length = 122

 Score =  151 bits (382), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 73/116 (62%), Positives = 84/116 (72%), Gaps = 1/116 (0%)

Query: 1   MGIPSELRDLWVSKTKTPFLIASPAEESKLLRSKQCTNEGVRAGLKAATIACVASAVPTL 60
           MGIPSELRD+W++   T   IASPAEE K+LRS QCT EGVRAG KAA I CV S  PTL
Sbjct: 1   MGIPSELRDMWIANKNTSLQIASPAEEQKMLRSSQCTAEGVRAGFKAAGIGCVTSTGPTL 60

Query: 61  AAVRMIPWAKANLNYTAQALXXXXXXXXXYFIVADKTILECARKNA-RLQDSLRHD 115
            AVRMIPWAKANLNYTAQAL         +F+ ADK IL CARK +  L++SL+ +
Sbjct: 61  VAVRMIPWAKANLNYTAQALIISAVSVASFFVAADKIILACARKQSLLLEESLKQE 116


>Medtr3g110390.2 | early nodulin 93 | HC | chr3:51579731-51577943 |
           20130731
          Length = 121

 Score =  145 bits (365), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 72/116 (62%), Positives = 83/116 (71%), Gaps = 2/116 (1%)

Query: 1   MGIPSELRDLWVSKTKTPFLIASPAEESKLLRSKQCTNEGVRAGLKAATIACVASAVPTL 60
           MGIPSELRD+W++   T   IASPAEE K+LRS QCT  GVRAG KAA I CV S  PTL
Sbjct: 1   MGIPSELRDMWIANKNTSLQIASPAEEQKMLRSSQCT-AGVRAGFKAAGIGCVTSTGPTL 59

Query: 61  AAVRMIPWAKANLNYTAQALXXXXXXXXXYFIVADKTILECARKNA-RLQDSLRHD 115
            AVRMIPWAKANLNYTAQAL         +F+ ADK IL CARK +  L++SL+ +
Sbjct: 60  VAVRMIPWAKANLNYTAQALIISAVSVASFFVAADKIILACARKQSLLLEESLKQE 115


>Medtr4g113820.1 | early nodulin 93 | HC | chr4:46845878-46846953 |
           20130731
          Length = 107

 Score = 83.6 bits (205), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 45/80 (56%), Positives = 61/80 (76%)

Query: 27  ESKLLRSKQCTNEGVRAGLKAATIACVASAVPTLAAVRMIPWAKANLNYTAQALXXXXXX 86
           + +L  +K+C++EGV AG KAA +A +A+A+PTLA+VRM+PWA+ANLN TAQAL      
Sbjct: 21  DQRLAMAKRCSHEGVMAGAKAAVVATIATAIPTLASVRMLPWARANLNPTAQALIISTVA 80

Query: 87  XXXYFIVADKTILECARKNA 106
              YF+VADKT+L  ARKN+
Sbjct: 81  GAAYFVVADKTVLATARKNS 100