Miyakogusa Predicted Gene
- Lj4g3v2151410.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2151410.2 Non Characterized Hit- tr|I1J7K9|I1J7K9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.5918
PE=,37.11,3e-18,seg,NULL,CUFF.50603.2
(608 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr7g071440.1 | SCAR2, putative | HC | chr7:26469401-26462014 ... 379 e-105
Medtr4g013235.2 | SCAR2, putative | HC | chr4:3624743-3632836 | ... 169 8e-42
Medtr4g013235.3 | SCAR2, putative | HC | chr4:3624743-3632913 | ... 169 8e-42
Medtr4g013235.1 | SCAR2, putative | HC | chr4:3624744-3632964 | ... 169 9e-42
>Medtr7g071440.1 | SCAR2, putative | HC | chr7:26469401-26462014 |
20130731
Length = 1495
Score = 379 bits (973), Expect = e-105, Method: Compositional matrix adjust.
Identities = 260/555 (46%), Positives = 334/555 (60%), Gaps = 78/555 (14%)
Query: 79 ASVSSTFTPIKDDACIVVSYDNNSLNNLHVCDPHIHSNALLQDSNDINFSNEDESGDPSD 138
SVSS P+ D C+++S D+ + P Q + +N S+
Sbjct: 553 GSVSSGTCPV-DSGCLLLSLDHGATATSLAALP-----TKTQSDETPHVANH------SN 600
Query: 139 IKVLQSKSLNGYSCEILVXXXXXXXXXVPVCLSMEAPPHSGTKVLLDDRDLKSEDDK-IA 197
I+V+Q++SLN EI V P+CL ME + GTK+LLDDRD KS++D A
Sbjct: 601 IEVMQTESLNEDCSEISVVGDIGSREENPICLPMEVDLNLGTKLLLDDRDFKSDNDNNKA 660
Query: 198 TQLNSDDLFPVADTTLESSFTEEPCSSHTLGNPHNGPNSAEIEVLYRDQQSNFEVMPSIM 257
QL+S+D FPV +T +E+SFTEE CS T GNP + P+SAE+E+LY DQ SNF+ +P M
Sbjct: 661 MQLDSEDSFPVLETNVETSFTEELCSDFTHGNPQDEPDSAEVEILYPDQLSNFKEVPMTM 720
Query: 258 PDDEISGSTCSSDPIEDEDHIKRPPCDD-TSKDNHVMVNDNFSVKVQSEDQPVSALSSVN 316
DEI+G TCS D +ED+D +K P D +D++VMVN+ F V VQS+D VSA+SS +
Sbjct: 721 LGDEINGPTCSLDTVEDDDRMKHPASPDCILQDDYVMVNNMFPVTVQSKDLDVSAVSSFD 780
Query: 317 IAENDASIVDCLASNSVSSPSRDLSDLHEPFLCSSDSHLIEMESHDVDLTKISVDLNADK 376
A+ ASI +CLAS+S+SSPS + S+LHE L S DS+ +E+ES +DLTK+SVDLNA+K
Sbjct: 781 SADTGASIANCLASDSISSPSMNPSNLHESLLGSKDSYRMEIES--IDLTKVSVDLNAEK 838
Query: 377 IESKVEPSPDIIFSPICSLTTLEESLSTFADPHE---------------------VEDQP 415
E ++EP I SP+ SLT LEESLSTF PHE V +QP
Sbjct: 839 KEYQLEPF-SYITSPVGSLTKLEESLSTFEYPHEKKMEVNEEVARDSLTELTSHTVVEQP 897
Query: 416 EIAFTDVQLNLNRPVPCDPV-FRIFNNFQHSSLKEKFQYGSSINDMEMVTLCSEQDSQRS 474
+IA TD QLNLN+ VP D I N+FQHS KEK Q GS +NDM+M T CSE DS S
Sbjct: 898 DIASTDKQLNLNKTVPSDSSDSGICNDFQHSLPKEKIQDGSPLNDMKMATQCSELDSG-S 956
Query: 475 GSILACQNDIQNSKDSLSPPLNDQLEPEQQDAKFLLRNEESYTSEKFQAQQMQLSNQLEQ 534
S+ ACQND+QNSK+ SPP ++ +PE
Sbjct: 957 ESVFACQNDLQNSKNGFSPPSYNRQDPESH------------------------------ 986
Query: 535 ERVSDAASKFTAEVHPDEPSH-DSSPKSSGETNPTKHVMDPLKPLLSDLFPKESKINVEE 593
+FT+EVHP+EPSH S S + NPTKHVMDP+KPLL DLFPKE+KIN+EE
Sbjct: 987 -------IEFTSEVHPEEPSHCYLSMSSDQKINPTKHVMDPMKPLLPDLFPKETKINLEE 1039
Query: 594 TPPMPPFPSMQWRTS 608
TPPMPP P MQW TS
Sbjct: 1040 TPPMPPLPPMQWITS 1054
>Medtr4g013235.2 | SCAR2, putative | HC | chr4:3624743-3632836 |
20130731
Length = 1572
Score = 169 bits (428), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 150/392 (38%), Positives = 214/392 (54%), Gaps = 55/392 (14%)
Query: 256 IMPDDEISGSTCSSDPIEDEDHIKRPPCDDTSKDNHVMVNDNFSVKVQSEDQPVSALSSV 315
++ DEI+GS S D E + H K P +S NH+ +N + S V S+ QPV SV
Sbjct: 707 VVHGDEITGSRSSVDQDEGDGHFKNP----SSPRNHMKINGDVSEIVASKGQPVP---SV 759
Query: 316 NIAENDASIVDCLASNSVSSPSRDLSDLHEPFLCSSDSHLIEMESHDVDLTKISVDLNAD 375
+ AENDA I C AS + SPSR LS+ E SDS+ IE S++V+LT+I +D N +
Sbjct: 760 DSAENDAGINACPASGMICSPSRSLSNQQELVPAPSDSYQIE--SNEVELTQIFMDSNTE 817
Query: 376 KIESKVEP-----SPDIIFSPICSLTTLEESLSTFADPHEVEDQ---------------- 414
+++ P S DII P+ +LT EESLS FA+P+E+E +
Sbjct: 818 MSNNQLAPLSDTTSSDIIHPPVSNLTKSEESLSAFANPNEIETEVYEAVARESSTVLEGK 877
Query: 415 -----PEIAFTDVQLNLNRPVPCDPVFRIFNNFQHSSLKEKFQYGSSINDMEMVTLCSEQ 469
PEI DVQ+NLN+ PCD + + NN + SS + K I+D +MV SE
Sbjct: 878 KVAVHPEIVSADVQMNLNKSEPCD-LPDLENNIEKSSPRVKIHQTGFIDDAKMVPEFSEF 936
Query: 470 DSQRSGSILACQNDI-QNSKDSLSPPLNDQLEPE------------QQDAKFLLRNEESY 516
D+++S S +ND+ QN ++S S P +Q E E ++D +F L+ EE++
Sbjct: 937 DTRQSESTSYGRNDLLQNDRNSFSSPPYNQFESETYLEPHLQSQLGEKDGEFPLKYEENF 996
Query: 517 TSEKFQAQQMQLSNQLEQERVSDAASKFTAEVHPDEPSHDSSPKSSG--ETNPTKHVMDP 574
SEK Q+QQ+ +L+QE + F+ E+ DE S S S E N T++ +DP
Sbjct: 997 ASEKSQSQQIY---ELKQEGTHAPSESFS-EIPADESSSVHSSPQSSGLEINSTQYAVDP 1052
Query: 575 LKPLLSDLFPKESKINVEETPPMPPFPSMQWR 606
LK LL DL P E++ ++E PPMPP P MQWR
Sbjct: 1053 LKSLLPDLSPMETENKLDEMPPMPPLPPMQWR 1084
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 38/57 (66%)
Query: 67 DDEDRKCLAESIASVSSTFTPIKDDACIVVSYDNNSLNNLHVCDPHIHSNALLQDSN 123
+D DR L ES+AS S+ + IKDD C V S D SL+NL DPHIHS+ LLQ SN
Sbjct: 629 NDADRAGLVESVASKPSSPSLIKDDTCPVDSSDKISLDNLVDDDPHIHSHDLLQFSN 685
>Medtr4g013235.3 | SCAR2, putative | HC | chr4:3624743-3632913 |
20130731
Length = 1500
Score = 169 bits (428), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 150/392 (38%), Positives = 214/392 (54%), Gaps = 55/392 (14%)
Query: 256 IMPDDEISGSTCSSDPIEDEDHIKRPPCDDTSKDNHVMVNDNFSVKVQSEDQPVSALSSV 315
++ DEI+GS S D E + H K P +S NH+ +N + S V S+ QPV SV
Sbjct: 707 VVHGDEITGSRSSVDQDEGDGHFKNP----SSPRNHMKINGDVSEIVASKGQPVP---SV 759
Query: 316 NIAENDASIVDCLASNSVSSPSRDLSDLHEPFLCSSDSHLIEMESHDVDLTKISVDLNAD 375
+ AENDA I C AS + SPSR LS+ E SDS+ IE S++V+LT+I +D N +
Sbjct: 760 DSAENDAGINACPASGMICSPSRSLSNQQELVPAPSDSYQIE--SNEVELTQIFMDSNTE 817
Query: 376 KIESKVEP-----SPDIIFSPICSLTTLEESLSTFADPHEVEDQ---------------- 414
+++ P S DII P+ +LT EESLS FA+P+E+E +
Sbjct: 818 MSNNQLAPLSDTTSSDIIHPPVSNLTKSEESLSAFANPNEIETEVYEAVARESSTVLEGK 877
Query: 415 -----PEIAFTDVQLNLNRPVPCDPVFRIFNNFQHSSLKEKFQYGSSINDMEMVTLCSEQ 469
PEI DVQ+NLN+ PCD + + NN + SS + K I+D +MV SE
Sbjct: 878 KVAVHPEIVSADVQMNLNKSEPCD-LPDLENNIEKSSPRVKIHQTGFIDDAKMVPEFSEF 936
Query: 470 DSQRSGSILACQNDI-QNSKDSLSPPLNDQLEPE------------QQDAKFLLRNEESY 516
D+++S S +ND+ QN ++S S P +Q E E ++D +F L+ EE++
Sbjct: 937 DTRQSESTSYGRNDLLQNDRNSFSSPPYNQFESETYLEPHLQSQLGEKDGEFPLKYEENF 996
Query: 517 TSEKFQAQQMQLSNQLEQERVSDAASKFTAEVHPDEPSHDSSPKSSG--ETNPTKHVMDP 574
SEK Q+QQ+ +L+QE + F+ E+ DE S S S E N T++ +DP
Sbjct: 997 ASEKSQSQQIY---ELKQEGTHAPSESFS-EIPADESSSVHSSPQSSGLEINSTQYAVDP 1052
Query: 575 LKPLLSDLFPKESKINVEETPPMPPFPSMQWR 606
LK LL DL P E++ ++E PPMPP P MQWR
Sbjct: 1053 LKSLLPDLSPMETENKLDEMPPMPPLPPMQWR 1084
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 38/57 (66%)
Query: 67 DDEDRKCLAESIASVSSTFTPIKDDACIVVSYDNNSLNNLHVCDPHIHSNALLQDSN 123
+D DR L ES+AS S+ + IKDD C V S D SL+NL DPHIHS+ LLQ SN
Sbjct: 629 NDADRAGLVESVASKPSSPSLIKDDTCPVDSSDKISLDNLVDDDPHIHSHDLLQFSN 685
>Medtr4g013235.1 | SCAR2, putative | HC | chr4:3624744-3632964 |
20130731
Length = 1573
Score = 169 bits (427), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 150/392 (38%), Positives = 214/392 (54%), Gaps = 55/392 (14%)
Query: 256 IMPDDEISGSTCSSDPIEDEDHIKRPPCDDTSKDNHVMVNDNFSVKVQSEDQPVSALSSV 315
++ DEI+GS S D E + H K P +S NH+ +N + S V S+ QPV SV
Sbjct: 708 VVHGDEITGSRSSVDQDEGDGHFKNP----SSPRNHMKINGDVSEIVASKGQPVP---SV 760
Query: 316 NIAENDASIVDCLASNSVSSPSRDLSDLHEPFLCSSDSHLIEMESHDVDLTKISVDLNAD 375
+ AENDA I C AS + SPSR LS+ E SDS+ IE S++V+LT+I +D N +
Sbjct: 761 DSAENDAGINACPASGMICSPSRSLSNQQELVPAPSDSYQIE--SNEVELTQIFMDSNTE 818
Query: 376 KIESKVEP-----SPDIIFSPICSLTTLEESLSTFADPHEVEDQ---------------- 414
+++ P S DII P+ +LT EESLS FA+P+E+E +
Sbjct: 819 MSNNQLAPLSDTTSSDIIHPPVSNLTKSEESLSAFANPNEIETEVYEAVARESSTVLEGK 878
Query: 415 -----PEIAFTDVQLNLNRPVPCDPVFRIFNNFQHSSLKEKFQYGSSINDMEMVTLCSEQ 469
PEI DVQ+NLN+ PCD + + NN + SS + K I+D +MV SE
Sbjct: 879 KVAVHPEIVSADVQMNLNKSEPCD-LPDLENNIEKSSPRVKIHQTGFIDDAKMVPEFSEF 937
Query: 470 DSQRSGSILACQNDI-QNSKDSLSPPLNDQLEPE------------QQDAKFLLRNEESY 516
D+++S S +ND+ QN ++S S P +Q E E ++D +F L+ EE++
Sbjct: 938 DTRQSESTSYGRNDLLQNDRNSFSSPPYNQFESETYLEPHLQSQLGEKDGEFPLKYEENF 997
Query: 517 TSEKFQAQQMQLSNQLEQERVSDAASKFTAEVHPDEPSHDSSPKSSG--ETNPTKHVMDP 574
SEK Q+QQ+ +L+QE + F+ E+ DE S S S E N T++ +DP
Sbjct: 998 ASEKSQSQQIY---ELKQEGTHAPSESFS-EIPADESSSVHSSPQSSGLEINSTQYAVDP 1053
Query: 575 LKPLLSDLFPKESKINVEETPPMPPFPSMQWR 606
LK LL DL P E++ ++E PPMPP P MQWR
Sbjct: 1054 LKSLLPDLSPMETENKLDEMPPMPPLPPMQWR 1085
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 38/57 (66%)
Query: 67 DDEDRKCLAESIASVSSTFTPIKDDACIVVSYDNNSLNNLHVCDPHIHSNALLQDSN 123
+D DR L ES+AS S+ + IKDD C V S D SL+NL DPHIHS+ LLQ SN
Sbjct: 630 NDADRAGLVESVASKPSSPSLIKDDTCPVDSSDKISLDNLVDDDPHIHSHDLLQFSN 686