Miyakogusa Predicted Gene
- Lj4g3v2151410.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2151410.1 Non Characterized Hit- tr|I1JL19|I1JL19_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,67.39,0.002,seg,NULL,CUFF.50603.1
(650 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr7g071440.1 | SCAR2, putative | HC | chr7:26469401-26462014 ... 403 e-112
Medtr4g013235.2 | SCAR2, putative | HC | chr4:3624743-3632836 | ... 176 7e-44
Medtr4g013235.1 | SCAR2, putative | HC | chr4:3624744-3632964 | ... 176 8e-44
Medtr4g013235.3 | SCAR2, putative | HC | chr4:3624743-3632913 | ... 176 8e-44
>Medtr7g071440.1 | SCAR2, putative | HC | chr7:26469401-26462014 |
20130731
Length = 1495
Score = 403 bits (1035), Expect = e-112, Method: Compositional matrix adjust.
Identities = 273/576 (47%), Positives = 350/576 (60%), Gaps = 78/576 (13%)
Query: 79 ASVSSTFTPIKDDACIVVSYDNNSLNNLHVCDPHIHSNALLQDSNDINFSNEDESGDPSD 138
SVSS P+ D C+++S D+ + P Q + +N S+
Sbjct: 553 GSVSSGTCPV-DSGCLLLSLDHGATATSLAALP-----TKTQSDETPHVANH------SN 600
Query: 139 IKVLQSKSLNGYSCEILVXXXXXXXXXVPVCLSMEAPPHSGTKVLLDDRDLKSEDDK-IA 197
I+V+Q++SLN EI V P+CL ME + GTK+LLDDRD KS++D A
Sbjct: 601 IEVMQTESLNEDCSEISVVGDIGSREENPICLPMEVDLNLGTKLLLDDRDFKSDNDNNKA 660
Query: 198 TQLNSDDLFPVADTTLESSFTEEPCSSHTLGNPHNGPNSAEIEVLYRDQQSNFEVMPSIM 257
QL+S+D FPV +T +E+SFTEE CS T GNP + P+SAE+E+LY DQ SNF+ +P M
Sbjct: 661 MQLDSEDSFPVLETNVETSFTEELCSDFTHGNPQDEPDSAEVEILYPDQLSNFKEVPMTM 720
Query: 258 PDDEISGSTCSSDPIEDEDHIKRPPCDD-TSKDNHVMVNDNFSVKVQSEDQPVSALSSVN 316
DEI+G TCS D +ED+D +K P D +D++VMVN+ F V VQS+D VSA+SS +
Sbjct: 721 LGDEINGPTCSLDTVEDDDRMKHPASPDCILQDDYVMVNNMFPVTVQSKDLDVSAVSSFD 780
Query: 317 IAENDASIVDCLASNSVSSPSRDLSDLHEPFLCSSDSHLIEMESHDVDLTKISVDLNADK 376
A+ ASI +CLAS+S+SSPS + S+LHE L S DS+ +E+ES +DLTK+SVDLNA+K
Sbjct: 781 SADTGASIANCLASDSISSPSMNPSNLHESLLGSKDSYRMEIES--IDLTKVSVDLNAEK 838
Query: 377 IESKVEPSPDIIFSPICSLTTLEESLSTFADPHEKEIEVNEAVPGESLAELTAHEKEMEV 436
E ++EP I SP+ SLT LEESLSTF PHEK+ MEV
Sbjct: 839 KEYQLEPF-SYITSPVGSLTKLEESLSTFEYPHEKK---------------------MEV 876
Query: 437 NEAVPGESLAELTAHEVEDQPEIAFTDVQLNLNRPVPCDPV-FRIFNNFQHSSLKEKFQY 495
NE V +SL ELT+H V +QP+IA TD QLNLN+ VP D I N+FQHS KEK Q
Sbjct: 877 NEEVARDSLTELTSHTVVEQPDIASTDKQLNLNKTVPSDSSDSGICNDFQHSLPKEKIQD 936
Query: 496 GSSINDMEMVTLCSEQDSQRSGSILACQNDIQNSKDSLSPPLNDQLEPEQQDAKFLLRNE 555
GS +NDM+M T CSE DS S S+ ACQND+QNSK+ SPP ++ +PE
Sbjct: 937 GSPLNDMKMATQCSELDSG-SESVFACQNDLQNSKNGFSPPSYNRQDPESH--------- 986
Query: 556 ESYTSEKFQAQQMQLSNQLEQERVSDAASKFTAEVHPDEPSHDS-SPKSSGETNPTKHVM 614
+FT+EVHP+EPSH S S + NPTKHVM
Sbjct: 987 ----------------------------IEFTSEVHPEEPSHCYLSMSSDQKINPTKHVM 1018
Query: 615 DPLKPLLSDLFPKESKINVEETPPMPPFPSMQWRTS 650
DP+KPLL DLFPKE+KIN+EETPPMPP P MQW TS
Sbjct: 1019 DPMKPLLPDLFPKETKINLEETPPMPPLPPMQWITS 1054
>Medtr4g013235.2 | SCAR2, putative | HC | chr4:3624743-3632836 |
20130731
Length = 1572
Score = 176 bits (446), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 158/413 (38%), Positives = 223/413 (53%), Gaps = 55/413 (13%)
Query: 256 IMPDDEISGSTCSSDPIEDEDHIKRPPCDDTSKDNHVMVNDNFSVKVQSEDQPVSALSSV 315
++ DEI+GS S D E + H K P +S NH+ +N + S V S+ QPV SV
Sbjct: 707 VVHGDEITGSRSSVDQDEGDGHFKNP----SSPRNHMKINGDVSEIVASKGQPVP---SV 759
Query: 316 NIAENDASIVDCLASNSVSSPSRDLSDLHEPFLCSSDSHLIEMESHDVDLTKISVDLNAD 375
+ AENDA I C AS + SPSR LS+ E SDS+ ++ES++V+LT+I +D N +
Sbjct: 760 DSAENDAGINACPASGMICSPSRSLSNQQELVPAPSDSY--QIESNEVELTQIFMDSNTE 817
Query: 376 KIESKVEP-----SPDIIFSPICSLTTLEESLSTFADPHEKEIEVNEAVPGESLAELTAH 430
+++ P S DII P+ +LT EESLS FA+P+E E EV EAV ES L
Sbjct: 818 MSNNQLAPLSDTTSSDIIHPPVSNLTKSEESLSAFANPNEIETEVYEAVARESSTVLEGK 877
Query: 431 EKEMEVNEAVPGESLAELTAHEVEDQPEIAFTDVQLNLNRPVPCDPVFRIFNNFQHSSLK 490
+ V PEI DVQ+NLN+ PCD + + NN + SS +
Sbjct: 878 K---------------------VAVHPEIVSADVQMNLNKSEPCD-LPDLENNIEKSSPR 915
Query: 491 EKFQYGSSINDMEMVTLCSEQDSQRSGSILACQNDI-QNSKDSLSPPLNDQLEPE----- 544
K I+D +MV SE D+++S S +ND+ QN ++S S P +Q E E
Sbjct: 916 VKIHQTGFIDDAKMVPEFSEFDTRQSESTSYGRNDLLQNDRNSFSSPPYNQFESETYLEP 975
Query: 545 -------QQDAKFLLRNEESYTSEKFQAQQMQLSNQLEQERVSDAASKFTAEVHPDEPSH 597
++D +F L+ EE++ SEK Q+QQ+ +L+QE + F+ E+ DE S
Sbjct: 976 HLQSQLGEKDGEFPLKYEENFASEKSQSQQIY---ELKQEGTHAPSESFS-EIPADESSS 1031
Query: 598 DSSPKSSG--ETNPTKHVMDPLKPLLSDLFPKESKINVEETPPMPPFPSMQWR 648
S S E N T++ +DPLK LL DL P E++ ++E PPMPP P MQWR
Sbjct: 1032 VHSSPQSSGLEINSTQYAVDPLKSLLPDLSPMETENKLDEMPPMPPLPPMQWR 1084
Score = 53.1 bits (126), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 38/57 (66%)
Query: 67 DDEDRKCLAESIASVSSTFTPIKDDACIVVSYDNNSLNNLHVCDPHIHSNALLQDSN 123
+D DR L ES+AS S+ + IKDD C V S D SL+NL DPHIHS+ LLQ SN
Sbjct: 629 NDADRAGLVESVASKPSSPSLIKDDTCPVDSSDKISLDNLVDDDPHIHSHDLLQFSN 685
>Medtr4g013235.1 | SCAR2, putative | HC | chr4:3624744-3632964 |
20130731
Length = 1573
Score = 176 bits (445), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 158/413 (38%), Positives = 223/413 (53%), Gaps = 55/413 (13%)
Query: 256 IMPDDEISGSTCSSDPIEDEDHIKRPPCDDTSKDNHVMVNDNFSVKVQSEDQPVSALSSV 315
++ DEI+GS S D E + H K P +S NH+ +N + S V S+ QPV SV
Sbjct: 708 VVHGDEITGSRSSVDQDEGDGHFKNP----SSPRNHMKINGDVSEIVASKGQPVP---SV 760
Query: 316 NIAENDASIVDCLASNSVSSPSRDLSDLHEPFLCSSDSHLIEMESHDVDLTKISVDLNAD 375
+ AENDA I C AS + SPSR LS+ E SDS+ ++ES++V+LT+I +D N +
Sbjct: 761 DSAENDAGINACPASGMICSPSRSLSNQQELVPAPSDSY--QIESNEVELTQIFMDSNTE 818
Query: 376 KIESKVEP-----SPDIIFSPICSLTTLEESLSTFADPHEKEIEVNEAVPGESLAELTAH 430
+++ P S DII P+ +LT EESLS FA+P+E E EV EAV ES L
Sbjct: 819 MSNNQLAPLSDTTSSDIIHPPVSNLTKSEESLSAFANPNEIETEVYEAVARESSTVLEGK 878
Query: 431 EKEMEVNEAVPGESLAELTAHEVEDQPEIAFTDVQLNLNRPVPCDPVFRIFNNFQHSSLK 490
+ V PEI DVQ+NLN+ PCD + + NN + SS +
Sbjct: 879 K---------------------VAVHPEIVSADVQMNLNKSEPCD-LPDLENNIEKSSPR 916
Query: 491 EKFQYGSSINDMEMVTLCSEQDSQRSGSILACQNDI-QNSKDSLSPPLNDQLEPE----- 544
K I+D +MV SE D+++S S +ND+ QN ++S S P +Q E E
Sbjct: 917 VKIHQTGFIDDAKMVPEFSEFDTRQSESTSYGRNDLLQNDRNSFSSPPYNQFESETYLEP 976
Query: 545 -------QQDAKFLLRNEESYTSEKFQAQQMQLSNQLEQERVSDAASKFTAEVHPDEPSH 597
++D +F L+ EE++ SEK Q+QQ+ +L+QE + F+ E+ DE S
Sbjct: 977 HLQSQLGEKDGEFPLKYEENFASEKSQSQQIY---ELKQEGTHAPSESFS-EIPADESSS 1032
Query: 598 DSSPKSSG--ETNPTKHVMDPLKPLLSDLFPKESKINVEETPPMPPFPSMQWR 648
S S E N T++ +DPLK LL DL P E++ ++E PPMPP P MQWR
Sbjct: 1033 VHSSPQSSGLEINSTQYAVDPLKSLLPDLSPMETENKLDEMPPMPPLPPMQWR 1085
Score = 53.1 bits (126), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 38/57 (66%)
Query: 67 DDEDRKCLAESIASVSSTFTPIKDDACIVVSYDNNSLNNLHVCDPHIHSNALLQDSN 123
+D DR L ES+AS S+ + IKDD C V S D SL+NL DPHIHS+ LLQ SN
Sbjct: 630 NDADRAGLVESVASKPSSPSLIKDDTCPVDSSDKISLDNLVDDDPHIHSHDLLQFSN 686
>Medtr4g013235.3 | SCAR2, putative | HC | chr4:3624743-3632913 |
20130731
Length = 1500
Score = 176 bits (445), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 158/413 (38%), Positives = 223/413 (53%), Gaps = 55/413 (13%)
Query: 256 IMPDDEISGSTCSSDPIEDEDHIKRPPCDDTSKDNHVMVNDNFSVKVQSEDQPVSALSSV 315
++ DEI+GS S D E + H K P +S NH+ +N + S V S+ QPV SV
Sbjct: 707 VVHGDEITGSRSSVDQDEGDGHFKNP----SSPRNHMKINGDVSEIVASKGQPVP---SV 759
Query: 316 NIAENDASIVDCLASNSVSSPSRDLSDLHEPFLCSSDSHLIEMESHDVDLTKISVDLNAD 375
+ AENDA I C AS + SPSR LS+ E SDS+ ++ES++V+LT+I +D N +
Sbjct: 760 DSAENDAGINACPASGMICSPSRSLSNQQELVPAPSDSY--QIESNEVELTQIFMDSNTE 817
Query: 376 KIESKVEP-----SPDIIFSPICSLTTLEESLSTFADPHEKEIEVNEAVPGESLAELTAH 430
+++ P S DII P+ +LT EESLS FA+P+E E EV EAV ES L
Sbjct: 818 MSNNQLAPLSDTTSSDIIHPPVSNLTKSEESLSAFANPNEIETEVYEAVARESSTVLEGK 877
Query: 431 EKEMEVNEAVPGESLAELTAHEVEDQPEIAFTDVQLNLNRPVPCDPVFRIFNNFQHSSLK 490
+ V PEI DVQ+NLN+ PCD + + NN + SS +
Sbjct: 878 K---------------------VAVHPEIVSADVQMNLNKSEPCD-LPDLENNIEKSSPR 915
Query: 491 EKFQYGSSINDMEMVTLCSEQDSQRSGSILACQNDI-QNSKDSLSPPLNDQLEPE----- 544
K I+D +MV SE D+++S S +ND+ QN ++S S P +Q E E
Sbjct: 916 VKIHQTGFIDDAKMVPEFSEFDTRQSESTSYGRNDLLQNDRNSFSSPPYNQFESETYLEP 975
Query: 545 -------QQDAKFLLRNEESYTSEKFQAQQMQLSNQLEQERVSDAASKFTAEVHPDEPSH 597
++D +F L+ EE++ SEK Q+QQ+ +L+QE + F+ E+ DE S
Sbjct: 976 HLQSQLGEKDGEFPLKYEENFASEKSQSQQIY---ELKQEGTHAPSESFS-EIPADESSS 1031
Query: 598 DSSPKSSG--ETNPTKHVMDPLKPLLSDLFPKESKINVEETPPMPPFPSMQWR 648
S S E N T++ +DPLK LL DL P E++ ++E PPMPP P MQWR
Sbjct: 1032 VHSSPQSSGLEINSTQYAVDPLKSLLPDLSPMETENKLDEMPPMPPLPPMQWR 1084
Score = 53.1 bits (126), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 38/57 (66%)
Query: 67 DDEDRKCLAESIASVSSTFTPIKDDACIVVSYDNNSLNNLHVCDPHIHSNALLQDSN 123
+D DR L ES+AS S+ + IKDD C V S D SL+NL DPHIHS+ LLQ SN
Sbjct: 629 NDADRAGLVESVASKPSSPSLIKDDTCPVDSSDKISLDNLVDDDPHIHSHDLLQFSN 685