Miyakogusa Predicted Gene

Lj4g3v2140310.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2140310.2 Non Characterized Hit- tr|D7TZZ5|D7TZZ5_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,40.88,4e-19,seg,NULL,CUFF.50366.2
         (146 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g126360.1 | transmembrane protein, putative | HC | chr4:52...   173   6e-44
Medtr8g016210.1 | transmembrane protein, putative | HC | chr8:54...    72   2e-13
Medtr8g016210.2 | transmembrane protein, putative | HC | chr8:54...    71   3e-13
Medtr8g016220.1 | transmembrane protein, putative | HC | chr8:54...    70   6e-13
Medtr8g016220.2 | transmembrane protein, putative | HC | chr8:54...    70   9e-13
Medtr8g010670.1 | MIRO-like protein | HC | chr8:2820580-2816047 ...    68   3e-12

>Medtr4g126360.1 | transmembrane protein, putative | HC |
           chr4:52568592-52571729 | 20130731
          Length = 147

 Score =  173 bits (438), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 92/137 (67%), Positives = 105/137 (76%), Gaps = 5/137 (3%)

Query: 11  TGL-LKRCKFIWRLLMLSNLALGAFLFARAKRRDSMETHR-RTAHKLHKGKTIXXXXXXX 68
           TGL +KR KF+WR L+LSNLALGAFLFA AKRRDSME  + RTAH+LHK K         
Sbjct: 13  TGLPMKRFKFVWRFLLLSNLALGAFLFASAKRRDSMEIQKKRTAHRLHKSKA---AVEVP 69

Query: 69  XXXXXRSMDINYDDFLVSAATPAEVRARIPEEQQREVFEWMLEEKRKVKPKDPAEKKQID 128
                 S+D+NY+DFLV A  P EVRA IP+EQQREVF+W+LEEKRKVKPKD  EKKQID
Sbjct: 70  PEPSTSSVDLNYEDFLVPATMPMEVRAPIPDEQQREVFKWILEEKRKVKPKDAMEKKQID 129

Query: 129 EEKDILKDFLRAESLPK 145
           E+KDILK FLRA S+PK
Sbjct: 130 EDKDILKQFLRANSIPK 146


>Medtr8g016210.1 | transmembrane protein, putative | HC |
           chr8:5432634-5428371 | 20130731
          Length = 183

 Score = 72.4 bits (176), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 49/140 (35%), Positives = 77/140 (55%), Gaps = 27/140 (19%)

Query: 13  LLKRCKFIWRLLMLSNLALGAFLFAR--AKRRDSMETHRRTAHKLHKGKTIXXXXXXXXX 70
            +KR KF+W +L+  N  +G +LFAR   K+ D+    +  A  +               
Sbjct: 61  FIKRYKFVWPMLLAVNFGIGVYLFARTSTKKEDTEVEEKDAAPPI--------------- 105

Query: 71  XXXRSMDINYDDFLVSAATPAEV------RARIPEEQQREVFEWMLEEKRKVKPKDPAEK 124
               S+        V++A+P  +      R  IPE QQRE+F+W+LEEKR +KPKD  EK
Sbjct: 106 ----SVKDTTAPVAVTSASPPPIANPVIKREPIPEGQQRELFKWILEEKRNIKPKDSEEK 161

Query: 125 KQIDEEKDILKDFLRAESLP 144
           ++I+EEK +LK+ +R++S+P
Sbjct: 162 RKIEEEKALLKNLIRSKSIP 181


>Medtr8g016210.2 | transmembrane protein, putative | HC |
           chr8:5432407-5428371 | 20130731
          Length = 140

 Score = 71.2 bits (173), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 49/140 (35%), Positives = 76/140 (54%), Gaps = 27/140 (19%)

Query: 13  LLKRCKFIWRLLMLSNLALGAFLFAR--AKRRDSMETHRRTAHKLHKGKTIXXXXXXXXX 70
            +KR KF+W +L+  N  +G +LFAR   K+ D+    +  A  +    T          
Sbjct: 18  FIKRYKFVWPMLLAVNFGIGVYLFARTSTKKEDTEVEEKDAAPPISVKDTTAPVA----- 72

Query: 71  XXXRSMDINYDDFLVSAATPAEV------RARIPEEQQREVFEWMLEEKRKVKPKDPAEK 124
                         V++A+P  +      R  IPE QQRE+F+W+LEEKR +KPKD  EK
Sbjct: 73  --------------VTSASPPPIANPVIKREPIPEGQQRELFKWILEEKRNIKPKDSEEK 118

Query: 125 KQIDEEKDILKDFLRAESLP 144
           ++I+EEK +LK+ +R++S+P
Sbjct: 119 RKIEEEKALLKNLIRSKSIP 138


>Medtr8g016220.1 | transmembrane protein, putative | HC |
           chr8:5439059-5435697 | 20130731
          Length = 175

 Score = 70.5 bits (171), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 32/51 (62%), Positives = 44/51 (86%)

Query: 94  RARIPEEQQREVFEWMLEEKRKVKPKDPAEKKQIDEEKDILKDFLRAESLP 144
           R  IPE QQRE+F+W+LEEKRK+KPKD  EK++IDEEK +LK+ +R++S+P
Sbjct: 123 REPIPEGQQRELFKWILEEKRKIKPKDSEEKQRIDEEKALLKNLIRSKSIP 173


>Medtr8g016220.2 | transmembrane protein, putative | HC |
           chr8:5439056-5435697 | 20130731
          Length = 135

 Score = 69.7 bits (169), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 32/51 (62%), Positives = 44/51 (86%)

Query: 94  RARIPEEQQREVFEWMLEEKRKVKPKDPAEKKQIDEEKDILKDFLRAESLP 144
           R  IPE QQRE+F+W+LEEKRK+KPKD  EK++IDEEK +LK+ +R++S+P
Sbjct: 83  REPIPEGQQRELFKWILEEKRKIKPKDSEEKQRIDEEKALLKNLIRSKSIP 133


>Medtr8g010670.1 | MIRO-like protein | HC | chr8:2820580-2816047 |
           20130731
          Length = 488

 Score = 67.8 bits (164), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 31/58 (53%), Positives = 47/58 (81%), Gaps = 1/58 (1%)

Query: 87  AATPAEVRARIPEEQQREVFEWMLEEKRKVKPKDPAEKKQIDEEKDILKDFLRAESLP 144
            A P  ++  IPE+Q+R +F+W+LEEKRK+KPKD  EK++IDEEK +LK+ +R++S+P
Sbjct: 430 TANPG-IKREIPEDQRRGLFKWILEEKRKIKPKDAKEKQKIDEEKALLKNLIRSKSIP 486