Miyakogusa Predicted Gene

Lj4g3v2140300.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2140300.1 Non Characterized Hit- tr|I1MSH6|I1MSH6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.57309
PE,88.67,0,PCI/PINT associated module,PCI/PINT associated module;
PCI,Proteasome component (PCI) domain; SUBFAM,CUFF.50372.1
         (415 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g091650.1 | proteasome-like protein | HC | chr7:36272020-3...   665   0.0  

>Medtr7g091650.1 | proteasome-like protein | HC |
           chr7:36272020-36266177 | 20130731
          Length = 414

 Score =  665 bits (1716), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 340/416 (81%), Positives = 372/416 (89%), Gaps = 3/416 (0%)

Query: 1   MAYMNMSMGEAHRRITDYLNRFSDAVSSQDGASFKSLFALSSNSPFLLSLADAVALFHDA 60
           MAY+  SMGEAHRRIT+YLNRFSDAVS Q+G S KSLF+LSSNS FLLSL+DA+ L +D 
Sbjct: 1   MAYL--SMGEAHRRITEYLNRFSDAVSYQNGISLKSLFSLSSNSHFLLSLSDALILVNDF 58

Query: 61  NRLINQSDSYSQFSDILLPLLRSVQNYKQGDFVEAYLAFEKTANAFIQEFRNWESAWALE 120
           NRLINQ+D+YS FSDI+ PL RS+Q+YKQ +FVEAY AFEKTANAF+QEFRNWESAWALE
Sbjct: 59  NRLINQNDNYSHFSDIISPLFRSLQHYKQSNFVEAYNAFEKTANAFVQEFRNWESAWALE 118

Query: 121 ALYVIVHDIRVLAEKADKELASTGKSPEKLKGAGSFLMKVFGALAGKGSKRVGALYVTCQ 180
           A+YV+V++IRVLAEKAD++LA+ GKSPEKLKGAGS LMKVFG LA KG+KRVGALYVTCQ
Sbjct: 119 AVYVVVYEIRVLAEKADRQLAAIGKSPEKLKGAGSLLMKVFGILAVKGAKRVGALYVTCQ 178

Query: 181 LFKIYFKLGTVHLCRSVIRSIETAR-IFDFEEFPKRDKVTYMYYTGRLEVFNENFPSADY 239
           LFKIYFKLGTV+LCRS+IRSIETA  IFDFEEFP RDKVTYMYYTGRLEVFNENFPSADY
Sbjct: 179 LFKIYFKLGTVNLCRSIIRSIETATTIFDFEEFPNRDKVTYMYYTGRLEVFNENFPSADY 238

Query: 240 KLSYALKHCNPQREANIRLILKHLIPVKLSIGILPNHRLLEKYSLLEYSNIVXXXXXXXX 299
           KLSYALKHCN Q EANIR+ILK+LIPVKLSIGILPNHRLLEKY+LLEY NIV        
Sbjct: 239 KLSYALKHCNQQHEANIRMILKYLIPVKLSIGILPNHRLLEKYNLLEYGNIVQALKRGDP 298

Query: 300 XXXXXXXQDYEDRFLRSGVYLVLEKLELQVYQRLVKKIYIIQKQKDPSKAHQVKLEVIVK 359
                  Q +ED FLRSGVYLVLEK+ELQVYQRLVKKIYIIQKQ+DPS+AHQVKLEVIVK
Sbjct: 299 RLLRSALQYHEDWFLRSGVYLVLEKVELQVYQRLVKKIYIIQKQRDPSRAHQVKLEVIVK 358

Query: 360 ALKWLEIDMDVDEVECIMAILIYKNLMKGYFAHKSKVVVLSKTDPFPKLIGKPVNS 415
           ALKWLEIDMDVDEVECIMAILIYKNL+KGYFAHKSKV VLSK DPFPKL GKPVNS
Sbjct: 359 ALKWLEIDMDVDEVECIMAILIYKNLVKGYFAHKSKVAVLSKQDPFPKLNGKPVNS 414