Miyakogusa Predicted Gene

Lj4g3v2140140.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2140140.1 tr|Q6YZF6|Q6YZF6_ORYSJ Os08g0535050 protein
OS=Oryza sativa subsp. japonica GN=P0702C09.24 PE=4
SV=1,52.21,4e-18,seg,NULL; coiled-coil,NULL; Use1,Vesicle transport
protein, Use1; SUBFAMILY NOT NAMED,NULL; FAMILY N,CUFF.50355.1
         (238 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g027710.1 | membrane fusion protein Use1 | HC | chr8:10013...   346   8e-96
Medtr8g027710.2 | membrane fusion protein Use1 | HC | chr8:10013...   346   1e-95
Medtr8g027710.3 | membrane fusion protein Use1 | HC | chr8:10013...   346   1e-95
Medtr4g126960.2 | membrane fusion protein Use1 | HC | chr4:52651...   343   1e-94
Medtr4g126960.5 | membrane fusion protein Use1 | HC | chr4:52651...   343   1e-94
Medtr4g126960.1 | membrane fusion protein Use1 | HC | chr4:52651...   343   1e-94
Medtr4g126960.3 | membrane fusion protein Use1 | HC | chr4:52651...   343   1e-94
Medtr4g126960.4 | membrane fusion protein Use1 | HC | chr4:52651...   316   1e-86

>Medtr8g027710.1 | membrane fusion protein Use1 | HC |
           chr8:10013262-10008357 | 20130731
          Length = 245

 Score =  346 bits (888), Expect = 8e-96,   Method: Compositional matrix adjust.
 Identities = 185/239 (77%), Positives = 197/239 (82%), Gaps = 3/239 (1%)

Query: 1   MGISKTEVNLKRLLXXXXXXXXXXKLVHYVATLREQLEQLAEEKTPEGLPRISKAILNDY 60
           MGISKTEVNLKRLL          KLVHYVATLREQLEQLAEEKTPEGLPRISKA+LNDY
Sbjct: 9   MGISKTEVNLKRLLAAAPHQQNQAKLVHYVATLREQLEQLAEEKTPEGLPRISKAMLNDY 68

Query: 61  SEKIEAIACKLVNSEPDIQVPEESERNLVKENPSDIELKRQIS-LSGLRRRPVPASSTED 119
           SEKIE IA KLV+   DI+V E++ERN VKENPS+IE    +S  SGLRRRPV ASSTED
Sbjct: 69  SEKIEGIASKLVHVS-DIEVSEDTERN-VKENPSEIEDIMPMSPSSGLRRRPVAASSTED 126

Query: 120 RAHEPAETDHLSPVKLDTAAHAHIDKHRKLQEDLTDEMVVLAKQLKESSLMMSQSVQNTE 179
           RA+EPAETDHLS VKLD A HAHI+KHRKLQ+DLTDEMVVLAKQLKESSLMMSQSV+NTE
Sbjct: 127 RAYEPAETDHLSSVKLDAAGHAHIEKHRKLQDDLTDEMVVLAKQLKESSLMMSQSVKNTE 186

Query: 180 KILDSTEKAIEHSLASTGRANVRATAIYSESSKTSCLTWLXXXXXXXXXXXXILLIRVT 238
           KILDSTE+AIEHSLASTGR NVRA  IYSESSKTSCLTWL            ILLIRVT
Sbjct: 187 KILDSTEEAIEHSLASTGRVNVRANTIYSESSKTSCLTWLVMFVMMCVFVMVILLIRVT 245


>Medtr8g027710.2 | membrane fusion protein Use1 | HC |
           chr8:10013931-10008042 | 20130731
          Length = 237

 Score =  346 bits (888), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 185/239 (77%), Positives = 197/239 (82%), Gaps = 3/239 (1%)

Query: 1   MGISKTEVNLKRLLXXXXXXXXXXKLVHYVATLREQLEQLAEEKTPEGLPRISKAILNDY 60
           MGISKTEVNLKRLL          KLVHYVATLREQLEQLAEEKTPEGLPRISKA+LNDY
Sbjct: 1   MGISKTEVNLKRLLAAAPHQQNQAKLVHYVATLREQLEQLAEEKTPEGLPRISKAMLNDY 60

Query: 61  SEKIEAIACKLVNSEPDIQVPEESERNLVKENPSDIELKRQIS-LSGLRRRPVPASSTED 119
           SEKIE IA KLV+   DI+V E++ERN VKENPS+IE    +S  SGLRRRPV ASSTED
Sbjct: 61  SEKIEGIASKLVHVS-DIEVSEDTERN-VKENPSEIEDIMPMSPSSGLRRRPVAASSTED 118

Query: 120 RAHEPAETDHLSPVKLDTAAHAHIDKHRKLQEDLTDEMVVLAKQLKESSLMMSQSVQNTE 179
           RA+EPAETDHLS VKLD A HAHI+KHRKLQ+DLTDEMVVLAKQLKESSLMMSQSV+NTE
Sbjct: 119 RAYEPAETDHLSSVKLDAAGHAHIEKHRKLQDDLTDEMVVLAKQLKESSLMMSQSVKNTE 178

Query: 180 KILDSTEKAIEHSLASTGRANVRATAIYSESSKTSCLTWLXXXXXXXXXXXXILLIRVT 238
           KILDSTE+AIEHSLASTGR NVRA  IYSESSKTSCLTWL            ILLIRVT
Sbjct: 179 KILDSTEEAIEHSLASTGRVNVRANTIYSESSKTSCLTWLVMFVMMCVFVMVILLIRVT 237


>Medtr8g027710.3 | membrane fusion protein Use1 | HC |
           chr8:10013954-10008194 | 20130731
          Length = 237

 Score =  346 bits (888), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 185/239 (77%), Positives = 197/239 (82%), Gaps = 3/239 (1%)

Query: 1   MGISKTEVNLKRLLXXXXXXXXXXKLVHYVATLREQLEQLAEEKTPEGLPRISKAILNDY 60
           MGISKTEVNLKRLL          KLVHYVATLREQLEQLAEEKTPEGLPRISKA+LNDY
Sbjct: 1   MGISKTEVNLKRLLAAAPHQQNQAKLVHYVATLREQLEQLAEEKTPEGLPRISKAMLNDY 60

Query: 61  SEKIEAIACKLVNSEPDIQVPEESERNLVKENPSDIELKRQIS-LSGLRRRPVPASSTED 119
           SEKIE IA KLV+   DI+V E++ERN VKENPS+IE    +S  SGLRRRPV ASSTED
Sbjct: 61  SEKIEGIASKLVHVS-DIEVSEDTERN-VKENPSEIEDIMPMSPSSGLRRRPVAASSTED 118

Query: 120 RAHEPAETDHLSPVKLDTAAHAHIDKHRKLQEDLTDEMVVLAKQLKESSLMMSQSVQNTE 179
           RA+EPAETDHLS VKLD A HAHI+KHRKLQ+DLTDEMVVLAKQLKESSLMMSQSV+NTE
Sbjct: 119 RAYEPAETDHLSSVKLDAAGHAHIEKHRKLQDDLTDEMVVLAKQLKESSLMMSQSVKNTE 178

Query: 180 KILDSTEKAIEHSLASTGRANVRATAIYSESSKTSCLTWLXXXXXXXXXXXXILLIRVT 238
           KILDSTE+AIEHSLASTGR NVRA  IYSESSKTSCLTWL            ILLIRVT
Sbjct: 179 KILDSTEEAIEHSLASTGRVNVRANTIYSESSKTSCLTWLVMFVMMCVFVMVILLIRVT 237


>Medtr4g126960.2 | membrane fusion protein Use1 | HC |
           chr4:52651088-52657503 | 20130731
          Length = 237

 Score =  343 bits (879), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 185/239 (77%), Positives = 195/239 (81%), Gaps = 3/239 (1%)

Query: 1   MGISKTEVNLKRLLXXXXXXXXXXKLVHYVATLREQLEQLAEEKTPEGLPRISKAILNDY 60
           M ISKTEVNLKRLL          KLVHYVATLREQLEQLAEEKTPEGLPRISKA LNDY
Sbjct: 1   MVISKTEVNLKRLLAAAPQQQNQAKLVHYVATLREQLEQLAEEKTPEGLPRISKATLNDY 60

Query: 61  SEKIEAIACKLVNSEPDIQVPEESERNLVKENPSDIELKRQIS-LSGLRRRPVPASSTED 119
           SEK EAIA KLV+   DI+V E++ERN VKENPS+IE K  +S  SGLRRRPV ASSTED
Sbjct: 61  SEKTEAIASKLVHV-SDIEVSEDTERN-VKENPSEIEDKMPMSPCSGLRRRPVAASSTED 118

Query: 120 RAHEPAETDHLSPVKLDTAAHAHIDKHRKLQEDLTDEMVVLAKQLKESSLMMSQSVQNTE 179
           RAHEP ETDHLS VKLD A HAHI+KHRKLQ+DLTDEMVVLAKQLKESSLMMSQSV+NTE
Sbjct: 119 RAHEPDETDHLSSVKLDAAGHAHIEKHRKLQDDLTDEMVVLAKQLKESSLMMSQSVKNTE 178

Query: 180 KILDSTEKAIEHSLASTGRANVRATAIYSESSKTSCLTWLXXXXXXXXXXXXILLIRVT 238
           KILDSTE+AIEHSLASTGR NVRA  IYSESSKTSCLTWL            ILLIRVT
Sbjct: 179 KILDSTEEAIEHSLASTGRVNVRANTIYSESSKTSCLTWLVMFVMTCVFVMVILLIRVT 237


>Medtr4g126960.5 | membrane fusion protein Use1 | HC |
           chr4:52651088-52657503 | 20130731
          Length = 237

 Score =  343 bits (879), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 185/239 (77%), Positives = 195/239 (81%), Gaps = 3/239 (1%)

Query: 1   MGISKTEVNLKRLLXXXXXXXXXXKLVHYVATLREQLEQLAEEKTPEGLPRISKAILNDY 60
           M ISKTEVNLKRLL          KLVHYVATLREQLEQLAEEKTPEGLPRISKA LNDY
Sbjct: 1   MVISKTEVNLKRLLAAAPQQQNQAKLVHYVATLREQLEQLAEEKTPEGLPRISKATLNDY 60

Query: 61  SEKIEAIACKLVNSEPDIQVPEESERNLVKENPSDIELKRQIS-LSGLRRRPVPASSTED 119
           SEK EAIA KLV+   DI+V E++ERN VKENPS+IE K  +S  SGLRRRPV ASSTED
Sbjct: 61  SEKTEAIASKLVHV-SDIEVSEDTERN-VKENPSEIEDKMPMSPCSGLRRRPVAASSTED 118

Query: 120 RAHEPAETDHLSPVKLDTAAHAHIDKHRKLQEDLTDEMVVLAKQLKESSLMMSQSVQNTE 179
           RAHEP ETDHLS VKLD A HAHI+KHRKLQ+DLTDEMVVLAKQLKESSLMMSQSV+NTE
Sbjct: 119 RAHEPDETDHLSSVKLDAAGHAHIEKHRKLQDDLTDEMVVLAKQLKESSLMMSQSVKNTE 178

Query: 180 KILDSTEKAIEHSLASTGRANVRATAIYSESSKTSCLTWLXXXXXXXXXXXXILLIRVT 238
           KILDSTE+AIEHSLASTGR NVRA  IYSESSKTSCLTWL            ILLIRVT
Sbjct: 179 KILDSTEEAIEHSLASTGRVNVRANTIYSESSKTSCLTWLVMFVMTCVFVMVILLIRVT 237


>Medtr4g126960.1 | membrane fusion protein Use1 | HC |
           chr4:52651088-52657503 | 20130731
          Length = 237

 Score =  343 bits (879), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 185/239 (77%), Positives = 195/239 (81%), Gaps = 3/239 (1%)

Query: 1   MGISKTEVNLKRLLXXXXXXXXXXKLVHYVATLREQLEQLAEEKTPEGLPRISKAILNDY 60
           M ISKTEVNLKRLL          KLVHYVATLREQLEQLAEEKTPEGLPRISKA LNDY
Sbjct: 1   MVISKTEVNLKRLLAAAPQQQNQAKLVHYVATLREQLEQLAEEKTPEGLPRISKATLNDY 60

Query: 61  SEKIEAIACKLVNSEPDIQVPEESERNLVKENPSDIELKRQIS-LSGLRRRPVPASSTED 119
           SEK EAIA KLV+   DI+V E++ERN VKENPS+IE K  +S  SGLRRRPV ASSTED
Sbjct: 61  SEKTEAIASKLVHV-SDIEVSEDTERN-VKENPSEIEDKMPMSPCSGLRRRPVAASSTED 118

Query: 120 RAHEPAETDHLSPVKLDTAAHAHIDKHRKLQEDLTDEMVVLAKQLKESSLMMSQSVQNTE 179
           RAHEP ETDHLS VKLD A HAHI+KHRKLQ+DLTDEMVVLAKQLKESSLMMSQSV+NTE
Sbjct: 119 RAHEPDETDHLSSVKLDAAGHAHIEKHRKLQDDLTDEMVVLAKQLKESSLMMSQSVKNTE 178

Query: 180 KILDSTEKAIEHSLASTGRANVRATAIYSESSKTSCLTWLXXXXXXXXXXXXILLIRVT 238
           KILDSTE+AIEHSLASTGR NVRA  IYSESSKTSCLTWL            ILLIRVT
Sbjct: 179 KILDSTEEAIEHSLASTGRVNVRANTIYSESSKTSCLTWLVMFVMTCVFVMVILLIRVT 237


>Medtr4g126960.3 | membrane fusion protein Use1 | HC |
           chr4:52651311-52657503 | 20130731
          Length = 237

 Score =  343 bits (879), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 185/239 (77%), Positives = 195/239 (81%), Gaps = 3/239 (1%)

Query: 1   MGISKTEVNLKRLLXXXXXXXXXXKLVHYVATLREQLEQLAEEKTPEGLPRISKAILNDY 60
           M ISKTEVNLKRLL          KLVHYVATLREQLEQLAEEKTPEGLPRISKA LNDY
Sbjct: 1   MVISKTEVNLKRLLAAAPQQQNQAKLVHYVATLREQLEQLAEEKTPEGLPRISKATLNDY 60

Query: 61  SEKIEAIACKLVNSEPDIQVPEESERNLVKENPSDIELKRQIS-LSGLRRRPVPASSTED 119
           SEK EAIA KLV+   DI+V E++ERN VKENPS+IE K  +S  SGLRRRPV ASSTED
Sbjct: 61  SEKTEAIASKLVHV-SDIEVSEDTERN-VKENPSEIEDKMPMSPCSGLRRRPVAASSTED 118

Query: 120 RAHEPAETDHLSPVKLDTAAHAHIDKHRKLQEDLTDEMVVLAKQLKESSLMMSQSVQNTE 179
           RAHEP ETDHLS VKLD A HAHI+KHRKLQ+DLTDEMVVLAKQLKESSLMMSQSV+NTE
Sbjct: 119 RAHEPDETDHLSSVKLDAAGHAHIEKHRKLQDDLTDEMVVLAKQLKESSLMMSQSVKNTE 178

Query: 180 KILDSTEKAIEHSLASTGRANVRATAIYSESSKTSCLTWLXXXXXXXXXXXXILLIRVT 238
           KILDSTE+AIEHSLASTGR NVRA  IYSESSKTSCLTWL            ILLIRVT
Sbjct: 179 KILDSTEEAIEHSLASTGRVNVRANTIYSESSKTSCLTWLVMFVMTCVFVMVILLIRVT 237


>Medtr4g126960.4 | membrane fusion protein Use1 | HC |
           chr4:52651633-52657503 | 20130731
          Length = 213

 Score =  316 bits (810), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 168/213 (78%), Positives = 179/213 (84%), Gaps = 3/213 (1%)

Query: 27  VHYVATLREQLEQLAEEKTPEGLPRISKAILNDYSEKIEAIACKLVNSEPDIQVPEESER 86
           + YVATLREQLEQLAEEKTPEGLPRISKA LNDYSEK EAIA KLV+   DI+V E++ER
Sbjct: 3   LQYVATLREQLEQLAEEKTPEGLPRISKATLNDYSEKTEAIASKLVHV-SDIEVSEDTER 61

Query: 87  NLVKENPSDIELKRQIS-LSGLRRRPVPASSTEDRAHEPAETDHLSPVKLDTAAHAHIDK 145
           N VKENPS+IE K  +S  SGLRRRPV ASSTEDRAHEP ETDHLS VKLD A HAHI+K
Sbjct: 62  N-VKENPSEIEDKMPMSPCSGLRRRPVAASSTEDRAHEPDETDHLSSVKLDAAGHAHIEK 120

Query: 146 HRKLQEDLTDEMVVLAKQLKESSLMMSQSVQNTEKILDSTEKAIEHSLASTGRANVRATA 205
           HRKLQ+DLTDEMVVLAKQLKESSLMMSQSV+NTEKILDSTE+AIEHSLASTGR NVRA  
Sbjct: 121 HRKLQDDLTDEMVVLAKQLKESSLMMSQSVKNTEKILDSTEEAIEHSLASTGRVNVRANT 180

Query: 206 IYSESSKTSCLTWLXXXXXXXXXXXXILLIRVT 238
           IYSESSKTSCLTWL            ILLIRVT
Sbjct: 181 IYSESSKTSCLTWLVMFVMTCVFVMVILLIRVT 213