Miyakogusa Predicted Gene

Lj4g3v2139430.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2139430.1 tr|G7IGA8|G7IGA8_MEDTR CLEC16A-like protein
OS=Medicago truncatula GN=MTR_2g038210 PE=4
SV=1,68.33,0.000000000000008,
,NODE_30211_length_668_cov_43.576347.path1.1
         (73 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g127210.1 | hypothetical protein | HC | chr4:52774254-5278...   101   1e-22
Medtr2g038210.3 | hypothetical protein | HC | chr2:16631583-1661...    85   1e-17
Medtr2g038210.1 | hypothetical protein | HC | chr2:16631583-1661...    85   1e-17
Medtr2g038210.6 | hypothetical protein | HC | chr2:16631583-1661...    85   2e-17

>Medtr4g127210.1 | hypothetical protein | HC |
           chr4:52774254-52785875 | 20130731
          Length = 862

 Score =  101 bits (252), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 47/58 (81%), Positives = 52/58 (89%)

Query: 1   MKRKGLVDGRWTLAFRDEESCKSALSMIAEEINFLSDEVHRRLRPLLNLETATDPSSS 58
           MK KGLVDGRWTLAFRDEESC SAL+M+ EE+NFLS+EVH RL+PLLNLETA D SSS
Sbjct: 788 MKTKGLVDGRWTLAFRDEESCNSALAMVVEEVNFLSNEVHGRLKPLLNLETAIDLSSS 845


>Medtr2g038210.3 | hypothetical protein | HC |
           chr2:16631583-16619321 | 20130731
          Length = 864

 Score = 85.1 bits (209), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 41/60 (68%), Positives = 45/60 (75%)

Query: 1   MKRKGLVDGRWTLAFRDEESCKSALSMIAEEINFLSDEVHRRLRPLLNLETATDPSSSPA 60
           +K K  VDGRW LAFRDEESCK+A  MI EEIN L DEV RR++PLL LET  D SSS A
Sbjct: 789 LKTKAFVDGRWILAFRDEESCKNAFLMIREEINHLCDEVDRRIKPLLKLETVLDISSSSA 848


>Medtr2g038210.1 | hypothetical protein | HC |
           chr2:16631583-16619321 | 20130731
          Length = 860

 Score = 84.7 bits (208), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 41/60 (68%), Positives = 45/60 (75%)

Query: 1   MKRKGLVDGRWTLAFRDEESCKSALSMIAEEINFLSDEVHRRLRPLLNLETATDPSSSPA 60
           +K K  VDGRW LAFRDEESCK+A  MI EEIN L DEV RR++PLL LET  D SSS A
Sbjct: 785 LKTKAFVDGRWILAFRDEESCKNAFLMIREEINHLCDEVDRRIKPLLKLETVLDISSSSA 844


>Medtr2g038210.6 | hypothetical protein | HC |
           chr2:16631583-16619321 | 20130731
          Length = 859

 Score = 84.7 bits (208), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 41/60 (68%), Positives = 45/60 (75%)

Query: 1   MKRKGLVDGRWTLAFRDEESCKSALSMIAEEINFLSDEVHRRLRPLLNLETATDPSSSPA 60
           +K K  VDGRW LAFRDEESCK+A  MI EEIN L DEV RR++PLL LET  D SSS A
Sbjct: 784 LKTKAFVDGRWILAFRDEESCKNAFLMIREEINHLCDEVDRRIKPLLKLETVLDISSSSA 843