Miyakogusa Predicted Gene

Lj4g3v2137100.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2137100.1 Non Characterized Hit- tr|K3WGX2|K3WGX2_PYTUL
Uncharacterized protein OS=Pythium ultimum GN=PYU1_G00,33.33,1e-17,no
description,Zinc finger, RING/FYVE/PHD-type; no
description,Homeodomain-like; FYVE/PHD zinc finge,CUFF.50317.1
         (687 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g038000.1 | pathogenesis-related homeodomain-like protein,...   642   0.0  
Medtr1g107015.3 | homeobox KN domain protein | HC | chr1:4844764...   176   9e-44
Medtr1g107015.4 | homeobox KN domain protein | HC | chr1:4844764...   176   9e-44
Medtr1g107015.2 | homeobox KN domain protein | HC | chr1:4844771...   175   1e-43
Medtr1g107015.1 | homeobox KN domain protein | HC | chr1:4844666...   175   1e-43

>Medtr2g038000.1 | pathogenesis-related homeodomain-like protein,
           putative | HC | chr2:16499640-16505838 | 20130731
          Length = 707

 Score =  642 bits (1656), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 366/686 (53%), Positives = 428/686 (62%), Gaps = 39/686 (5%)

Query: 24  KCQGKKHKMKSRSRTNSVGTNISRKRVTDSSLKGPHKDSSNKKLVSRQKLHKTDRXXXXX 83
           K Q KKH++KS+S      TN S +  TDSS K   KDSSNK          TDR     
Sbjct: 37  KHQRKKHRLKSKSHKLGGCTNASVRTATDSSNKASTKDSSNK----------TDRNSTQV 86

Query: 84  XXXXXXX--XXXXXXXRKEGKDA-DGEVXXXXXXXXXXXXXXXNNVDVDEASRLQRRTRY 140
                           RK  KD  D E                +NVD+D+  RLQRRTR 
Sbjct: 87  QPSKKIQGGKTSLNNDRKGEKDVVDQEGNIQKRKRRRKKKRQRHNVDLDDTVRLQRRTRN 146

Query: 141 LLIKMKLEQNLIDAYSGEGWKGQSREKIRPEKELQRARKQILKCKLGIRDAIHQ----XX 196
           +LI+MK EQNLIDAY+GEGWKGQSREKIRPE ELQRA+KQILKCKL IRDAIHQ      
Sbjct: 147 ILIRMKQEQNLIDAYAGEGWKGQSREKIRPEMELQRAKKQILKCKLSIRDAIHQLDSLSS 206

Query: 197 XXXXXXXXXXXXXXXXHEHILCAKCKLREDLPDNGIILCDGTCNRAFHQKCHDPPLDSED 256
                           HEHI CA CK+ E  PDN IILCDGTCNRAFHQ+C DPPL++ED
Sbjct: 207 VGSIEGSVIATDGSVSHEHIFCANCKINEVSPDNDIILCDGTCNRAFHQRCLDPPLETED 266

Query: 257 IPEGDQGWLCKFCACKMEILGAMNAHLGTRFSLHSDWQDVFKEEASLPDGDVASLNPEAE 316
           IP  DQGW CK+C CK+EIL A NAHLGTRF L S WQDVFKEEA++PDGD A LN E E
Sbjct: 267 IPPEDQGWFCKYCDCKIEILEATNAHLGTRFPLDSTWQDVFKEEAAIPDGDAALLNQEEE 326

Query: 317 WPSDDSEDDDYNPERAEDSR-NINTEEXXXXXXXXXXXXXXXXXXXXXXXXXXXGVNHEH 375
           WPSDD EDDDYNPER E+S    NTE                            G+N E+
Sbjct: 327 WPSDDPEDDDYNPERKEESHGGFNTEGNDKNASDDSSSSSSMWSLNGECSLLDEGINLEY 386

Query: 376 FXXXXXXXXXXXXXKECGRRQRKAVDYKKLYDEMFGKDALACEQVSEDEDWG-------- 427
           +               CGRRQR+AVDYKKLYDEMFGKDA  CEQVSEDEDWG        
Sbjct: 387 YSNDHIDSDESGEIA-CGRRQRRAVDYKKLYDEMFGKDAPPCEQVSEDEDWGPRKRRRRE 445

Query: 428 -ECDAVDTLMTLHESENKNPNNGHNSKTRGGSLGVNIRRPNFRIPHNAVERLRQVFAENE 486
            E +AV+TLMTLHESENK PNN +N + RG S G  I+RP FR  H AVE+LRQVFAENE
Sbjct: 446 KESEAVNTLMTLHESENKYPNNKNNDRIRGNSSG--IKRPCFRFSHEAVEKLRQVFAENE 503

Query: 487 LPPRSIRESLSKELGLEIQKVSKWFKNARYTALKTRKLQAGSDQLQNITSKSSR------ 540
           LPP+S++++LSKELGL+  KV+KWFKNARY ALK RKLQ G  QLQ+ITSK+S+      
Sbjct: 504 LPPKSVKDALSKELGLDAAKVNKWFKNARYMALKIRKLQEGGQQLQSITSKTSKDSTSQH 563

Query: 541 LLNQEKADPLESKTSLTITHSPKNVKNATDGKKIQPSSSPLQGTQRKLSSTQPRENGNKD 600
           +   E  +P  +K  +T+  S K  +N T  +K + SS+PL+  + ++      ENGNKD
Sbjct: 564 VQEDEVLNPKSAK--ITVISSLKKCENVTGKEKTKASSNPLKKKRPEIPPCLG-ENGNKD 620

Query: 601 FMEDSDDVSXXXXXXXXXXXVNFTSEGDYQAAEKEFERLSRLKIKLDSMKQKLTGIQKQR 660
            ME SDDVS           V+F  EGD +AAE EFERLS++K K+D +KQ+LTG+Q  R
Sbjct: 621 SMEVSDDVSLMKLLQDRKKKVSFAFEGDSEAAELEFERLSKVKTKIDRLKQRLTGVQNCR 680

Query: 661 VKDSVEPHSNEPSIIYVPIAVLREKV 686
            K S E H NEPSI+YVPIA LREKV
Sbjct: 681 SKGSDEVHLNEPSIMYVPIAELREKV 706


>Medtr1g107015.3 | homeobox KN domain protein | HC |
           chr1:48447642-48453047 | 20130731
          Length = 851

 Score =  176 bits (445), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 98/210 (46%), Positives = 127/210 (60%), Gaps = 7/210 (3%)

Query: 129 DEASRLQRRTRYLLIKMKLEQNLIDAYSGEGWKGQSREKIRPEKELQRARKQILKCKLGI 188
           D+ S+++ + RY L ++  EQNLIDAYSGEGWKG S EK++PEKE+QRA+ +IL+ KL I
Sbjct: 245 DQFSKIRAQLRYYLNRISYEQNLIDAYSGEGWKGSSMEKLKPEKEIQRAKSEILRRKLKI 304

Query: 189 RDAIHQXXXXXXX----XXXXXXXXXXXHEHILCAKCKLREDLPDNGIILCDGTCNRAFH 244
           RD                           E I CAKC+ +    +N IILCDG C+R +H
Sbjct: 305 RDLFQNLDSLCAEGRLPESLFDSEGEIDSEDIFCAKCQTKVLGTNNDIILCDGACDRGYH 364

Query: 245 QKCHDPPLDSEDIPEGDQGWLCKFCACKMEILGAMNAHLGTRFSLHSDWQDVFKEEASLP 304
           Q C DPPL +EDIP GD+GWLC  C CK + +  +N  LGT  SL   W+ VF E A+  
Sbjct: 365 QLCLDPPLLTEDIPPGDEGWLCPGCDCKDDCIELVNDLLGTSLSLTDSWERVFPEAATAA 424

Query: 305 DGDVASLNPEAEWPSDDSEDDDYNPERAED 334
            G +  L+     PSDDS+DDDYNP+  ED
Sbjct: 425 -GSI--LDHNLGLPSDDSDDDDYNPDGPED 451



 Score = 65.5 bits (158), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 32/150 (21%)

Query: 393 GRRQRKAVDYKKLYDEMFGKDALACEQVSEDEDWGECDAVDTLMTL-------------- 438
           G+R  + +DY+KLY+E +  D       S+DEDW +         L              
Sbjct: 583 GKRNVERLDYQKLYEETYHSD------TSDDEDWADTTTPSRKKKLTAKITPGSPNGNAS 636

Query: 439 -----------HESENKNPNNGHNSKTRGGSLGVNIRRPNF-RIPHNAVERLRQVFAENE 486
                      H+ + +N NN       G +     R  ++ ++    V+RL + F EN+
Sbjct: 637 NNSRRTAKRNTHQHKVENTNNSPTKTLEGCTESGKKRGSSYCKLGEAVVQRLHKSFKENQ 696

Query: 487 LPPRSIRESLSKELGLEIQKVSKWFKNARY 516
            P R+ +ESL++ELGL  Q+V KWF N+R+
Sbjct: 697 YPERTAKESLAQELGLTFQQVDKWFGNSRW 726


>Medtr1g107015.4 | homeobox KN domain protein | HC |
           chr1:48447642-48453047 | 20130731
          Length = 851

 Score =  176 bits (445), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 98/210 (46%), Positives = 127/210 (60%), Gaps = 7/210 (3%)

Query: 129 DEASRLQRRTRYLLIKMKLEQNLIDAYSGEGWKGQSREKIRPEKELQRARKQILKCKLGI 188
           D+ S+++ + RY L ++  EQNLIDAYSGEGWKG S EK++PEKE+QRA+ +IL+ KL I
Sbjct: 245 DQFSKIRAQLRYYLNRISYEQNLIDAYSGEGWKGSSMEKLKPEKEIQRAKSEILRRKLKI 304

Query: 189 RDAIHQXXXXXXX----XXXXXXXXXXXHEHILCAKCKLREDLPDNGIILCDGTCNRAFH 244
           RD                           E I CAKC+ +    +N IILCDG C+R +H
Sbjct: 305 RDLFQNLDSLCAEGRLPESLFDSEGEIDSEDIFCAKCQTKVLGTNNDIILCDGACDRGYH 364

Query: 245 QKCHDPPLDSEDIPEGDQGWLCKFCACKMEILGAMNAHLGTRFSLHSDWQDVFKEEASLP 304
           Q C DPPL +EDIP GD+GWLC  C CK + +  +N  LGT  SL   W+ VF E A+  
Sbjct: 365 QLCLDPPLLTEDIPPGDEGWLCPGCDCKDDCIELVNDLLGTSLSLTDSWERVFPEAATAA 424

Query: 305 DGDVASLNPEAEWPSDDSEDDDYNPERAED 334
            G +  L+     PSDDS+DDDYNP+  ED
Sbjct: 425 -GSI--LDHNLGLPSDDSDDDDYNPDGPED 451



 Score = 65.5 bits (158), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 32/150 (21%)

Query: 393 GRRQRKAVDYKKLYDEMFGKDALACEQVSEDEDWGECDAVDTLMTL-------------- 438
           G+R  + +DY+KLY+E +  D       S+DEDW +         L              
Sbjct: 583 GKRNVERLDYQKLYEETYHSD------TSDDEDWADTTTPSRKKKLTAKITPGSPNGNAS 636

Query: 439 -----------HESENKNPNNGHNSKTRGGSLGVNIRRPNF-RIPHNAVERLRQVFAENE 486
                      H+ + +N NN       G +     R  ++ ++    V+RL + F EN+
Sbjct: 637 NNSRRTAKRNTHQHKVENTNNSPTKTLEGCTESGKKRGSSYCKLGEAVVQRLHKSFKENQ 696

Query: 487 LPPRSIRESLSKELGLEIQKVSKWFKNARY 516
            P R+ +ESL++ELGL  Q+V KWF N+R+
Sbjct: 697 YPERTAKESLAQELGLTFQQVDKWFGNSRW 726


>Medtr1g107015.2 | homeobox KN domain protein | HC |
           chr1:48447717-48453047 | 20130731
          Length = 826

 Score =  175 bits (444), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 98/210 (46%), Positives = 127/210 (60%), Gaps = 7/210 (3%)

Query: 129 DEASRLQRRTRYLLIKMKLEQNLIDAYSGEGWKGQSREKIRPEKELQRARKQILKCKLGI 188
           D+ S+++ + RY L ++  EQNLIDAYSGEGWKG S EK++PEKE+QRA+ +IL+ KL I
Sbjct: 220 DQFSKIRAQLRYYLNRISYEQNLIDAYSGEGWKGSSMEKLKPEKEIQRAKSEILRRKLKI 279

Query: 189 RDAIHQXXXXXXX----XXXXXXXXXXXHEHILCAKCKLREDLPDNGIILCDGTCNRAFH 244
           RD                           E I CAKC+ +    +N IILCDG C+R +H
Sbjct: 280 RDLFQNLDSLCAEGRLPESLFDSEGEIDSEDIFCAKCQTKVLGTNNDIILCDGACDRGYH 339

Query: 245 QKCHDPPLDSEDIPEGDQGWLCKFCACKMEILGAMNAHLGTRFSLHSDWQDVFKEEASLP 304
           Q C DPPL +EDIP GD+GWLC  C CK + +  +N  LGT  SL   W+ VF E A+  
Sbjct: 340 QLCLDPPLLTEDIPPGDEGWLCPGCDCKDDCIELVNDLLGTSLSLTDSWERVFPEAATAA 399

Query: 305 DGDVASLNPEAEWPSDDSEDDDYNPERAED 334
            G +  L+     PSDDS+DDDYNP+  ED
Sbjct: 400 -GSI--LDHNLGLPSDDSDDDDYNPDGPED 426



 Score = 65.5 bits (158), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 32/150 (21%)

Query: 393 GRRQRKAVDYKKLYDEMFGKDALACEQVSEDEDWGECDAVDTLMTL-------------- 438
           G+R  + +DY+KLY+E +  D       S+DEDW +         L              
Sbjct: 558 GKRNVERLDYQKLYEETYHSD------TSDDEDWADTTTPSRKKKLTAKITPGSPNGNAS 611

Query: 439 -----------HESENKNPNNGHNSKTRGGSLGVNIRRPNF-RIPHNAVERLRQVFAENE 486
                      H+ + +N NN       G +     R  ++ ++    V+RL + F EN+
Sbjct: 612 NNSRRTAKRNTHQHKVENTNNSPTKTLEGCTESGKKRGSSYCKLGEAVVQRLHKSFKENQ 671

Query: 487 LPPRSIRESLSKELGLEIQKVSKWFKNARY 516
            P R+ +ESL++ELGL  Q+V KWF N+R+
Sbjct: 672 YPERTAKESLAQELGLTFQQVDKWFGNSRW 701


>Medtr1g107015.1 | homeobox KN domain protein | HC |
           chr1:48446666-48453047 | 20130731
          Length = 926

 Score =  175 bits (444), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 98/210 (46%), Positives = 127/210 (60%), Gaps = 7/210 (3%)

Query: 129 DEASRLQRRTRYLLIKMKLEQNLIDAYSGEGWKGQSREKIRPEKELQRARKQILKCKLGI 188
           D+ S+++ + RY L ++  EQNLIDAYSGEGWKG S EK++PEKE+QRA+ +IL+ KL I
Sbjct: 320 DQFSKIRAQLRYYLNRISYEQNLIDAYSGEGWKGSSMEKLKPEKEIQRAKSEILRRKLKI 379

Query: 189 RDAIHQXXXXXXX----XXXXXXXXXXXHEHILCAKCKLREDLPDNGIILCDGTCNRAFH 244
           RD                           E I CAKC+ +    +N IILCDG C+R +H
Sbjct: 380 RDLFQNLDSLCAEGRLPESLFDSEGEIDSEDIFCAKCQTKVLGTNNDIILCDGACDRGYH 439

Query: 245 QKCHDPPLDSEDIPEGDQGWLCKFCACKMEILGAMNAHLGTRFSLHSDWQDVFKEEASLP 304
           Q C DPPL +EDIP GD+GWLC  C CK + +  +N  LGT  SL   W+ VF E A+  
Sbjct: 440 QLCLDPPLLTEDIPPGDEGWLCPGCDCKDDCIELVNDLLGTSLSLTDSWERVFPEAATAA 499

Query: 305 DGDVASLNPEAEWPSDDSEDDDYNPERAED 334
            G +  L+     PSDDS+DDDYNP+  ED
Sbjct: 500 -GSI--LDHNLGLPSDDSDDDDYNPDGPED 526



 Score = 65.5 bits (158), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 32/150 (21%)

Query: 393 GRRQRKAVDYKKLYDEMFGKDALACEQVSEDEDWGECDAVDTLMTL-------------- 438
           G+R  + +DY+KLY+E +  D       S+DEDW +         L              
Sbjct: 658 GKRNVERLDYQKLYEETYHSD------TSDDEDWADTTTPSRKKKLTAKITPGSPNGNAS 711

Query: 439 -----------HESENKNPNNGHNSKTRGGSLGVNIRRPNF-RIPHNAVERLRQVFAENE 486
                      H+ + +N NN       G +     R  ++ ++    V+RL + F EN+
Sbjct: 712 NNSRRTAKRNTHQHKVENTNNSPTKTLEGCTESGKKRGSSYCKLGEAVVQRLHKSFKENQ 771

Query: 487 LPPRSIRESLSKELGLEIQKVSKWFKNARY 516
            P R+ +ESL++ELGL  Q+V KWF N+R+
Sbjct: 772 YPERTAKESLAQELGLTFQQVDKWFGNSRW 801