Miyakogusa Predicted Gene

Lj4g3v2122840.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2122840.1 Non Characterized Hit- tr|D8QNT3|D8QNT3_SELML
Putative uncharacterized protein OS=Selaginella moelle,33.05,1e-17,GB
DEF: EXPRESSED PROTEIN (AT2G19080/T20K24.9) (HYPOTHETICAL
PROTEIN),NULL; METAXIN RELATED,NULL; se,CUFF.50295.1
         (276 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g127630.1 | metaxin-like protein, putative | HC | chr4:530...   348   3e-96
Medtr2g036910.1 | metaxin-like protein | HC | chr2:16012913-1601...   327   9e-90

>Medtr4g127630.1 | metaxin-like protein, putative | HC |
           chr4:53030193-53027056 | 20130731
          Length = 314

 Score =  348 bits (893), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 170/246 (69%), Positives = 192/246 (78%), Gaps = 2/246 (0%)

Query: 1   MAELNTLVVRKPCFGLPTGCPQCLSAFIYLKFAQVPFQLDFHLNNPHSDQIPYFEYGD-C 59
           MAE+ TLVVRKPCFGLPTGCPQCLS+ IYL F+Q+PFQLDFH+N+PHSD+IPY E GD  
Sbjct: 1   MAEVYTLVVRKPCFGLPTGCPQCLSSLIYLNFSQIPFQLDFHVNHPHSDKIPYIEVGDDY 60

Query: 60  VAYNNEKEGIIECXXXXXXXXXXXXXXXXXPDWISTKAVLTTWLADALAFELWIGCESSS 119
           VAYNNE EGIIEC                 PDWIS KA+LTTWL DAL +ELW+G + SS
Sbjct: 61  VAYNNEIEGIIECLKKDVGVVDLDSEVSSLPDWISIKAILTTWLHDALTYELWVGSDGSS 120

Query: 120 AHSIYYSDLPWPMGRILSQQKARSVKLKLGITDDNAQVKMKEIYGRASSAYEALSNCLGE 179
           A+SIYYSDLPWP+G+IL   K R VKLK GITDDNA VK +EIY RA+SAY ALS  LGE
Sbjct: 121 ANSIYYSDLPWPLGKILYSHKVRWVKLKHGITDDNAVVKKEEIYERANSAYGALSKLLGE 180

Query: 180 QNYLF-ENRPSSLDAIFLAHGLIVLQALPESSMMRINFLEHPNLVRYVEHCKTEIIEADT 238
           +NYLF E+RPSSLDAIFLAHGL+ LQALPESS +RI F EH NLVRYV  CKTE+ +A T
Sbjct: 181 KNYLFDESRPSSLDAIFLAHGLVALQALPESSTLRIKFSEHDNLVRYVHKCKTELKDAGT 240

Query: 239 SPSSGP 244
           SP S P
Sbjct: 241 SPPSAP 246


>Medtr2g036910.1 | metaxin-like protein | HC |
           chr2:16012913-16019765 | 20130731
          Length = 330

 Score =  327 bits (837), Expect = 9e-90,   Method: Compositional matrix adjust.
 Identities = 158/242 (65%), Positives = 190/242 (78%), Gaps = 3/242 (1%)

Query: 5   NTLVVRKPCFGLPTGCPQCLSAFIYLKFAQVPFQLDFHLNNPHSDQIPYFEYGDCVAYNN 64
           NTLVVRKPCFGLPTGCPQCLSA+I+LK +Q+PF LD+HLN P SDQIPYFE GD   YNN
Sbjct: 11  NTLVVRKPCFGLPTGCPQCLSAYIFLKLSQLPFHLDYHLNYPDSDQIPYFEAGDSATYNN 70

Query: 65  EKEGIIECXXXXXXXXXXXXXXXXXPDWISTKAVLTTWLADALAFELWIGCESSSAHSIY 124
           EKEGIIEC                 P+WI TK +LTTWLADAL +ELW+G + SSA+SIY
Sbjct: 71  EKEGIIECLKRDVGDLDTGVSSL--PEWIPTKVMLTTWLADALEYELWVGSDPSSAYSIY 128

Query: 125 YSDLPWPMGRILSQQKARSVKLKLGITDDNAQVKMKEIYGRASSAYEALSNCLGEQNYLF 184
           YSDLPWP+G++L  +KAR VK K  I++DNA VK +EIY +A+SAY+ALS  LGE++YL 
Sbjct: 129 YSDLPWPIGKVLFWKKARWVKQKHEISNDNADVKEEEIYRKANSAYDALSTLLGEESYLL 188

Query: 185 ENRPSSLDAIFLAHGLIVLQALPESSMMRINFLEHPNLVRYVEHCKTEIIE-ADTSPSSG 243
           ENRPSSLDAIFLAH L+VLQA PESS++R NFL+H NLV+YV+  K E+IE A TSPS+ 
Sbjct: 189 ENRPSSLDAIFLAHALVVLQAFPESSILRANFLKHANLVKYVQQRKGELIEAAGTSPSNV 248

Query: 244 PH 245
           P+
Sbjct: 249 PY 250