Miyakogusa Predicted Gene

Lj4g3v2120510.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2120510.1 Non Characterized Hit- tr|B3H692|B3H692_ARATH
Uncharacterized protein OS=Arabidopsis thaliana
GN=At2,31.84,5e-18,seg,NULL,CUFF.50272.1
         (206 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g036670.1 | transcription factor/transcription regulator |...   184   7e-47
Medtr4g127700.1 | transcription factor/transcription regulator |...   160   7e-40
Medtr2g083470.1 | transcription factor/transcription regulator, ...    74   7e-14

>Medtr2g036670.1 | transcription factor/transcription regulator | LC
           | chr2:15882680-15883559 | 20130731
          Length = 179

 Score =  184 bits (466), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 108/208 (51%), Positives = 129/208 (62%), Gaps = 31/208 (14%)

Query: 1   METQSSKRRRVYSLEPSKVVQSLFARNYLNYLVPALMKIKAKSPTSAEDSCRDCDVKKNV 60
           ME Q +KR+RVYS+EP+KVVQ+ F +NY+NYL PALMKIK +  TS E      +V+  V
Sbjct: 1   MEGQKAKRKRVYSVEPNKVVQAKFTKNYINYLAPALMKIKERR-TSIEAK----NVESVV 55

Query: 61  KYEVDMAMVFSAQGFAWSEGLKLKLQKDHDVNENVAAANTSFLKSESSTEEGSSRI-CDQ 119
           KYEVDMAMVFS+QGFAWS  LK KLQKD D                    EGSSRI   Q
Sbjct: 56  KYEVDMAMVFSSQGFAWSNALKTKLQKDGD--------------------EGSSRINYQQ 95

Query: 120 NEIVPVDFCANXXXXXXXXXXXEMPELEKGLGRXXXXXXXXQLKSLRKLVPGGEE-ICDE 178
           NE+VP+DF                  +E+ +          QL+ LRKL+PGGEE ICDE
Sbjct: 96  NEMVPLDFSKKICSKSEANKIL----VEENIDGDEDEIVDDQLRCLRKLIPGGEEIICDE 151

Query: 179 DMVGELESYVRCLQMQVNVLQCLVAETS 206
           +MV ELESYV CLQMQVN+LQCL  +TS
Sbjct: 152 EMVNELESYVSCLQMQVNILQCLTHQTS 179


>Medtr4g127700.1 | transcription factor/transcription regulator | LC
           | chr4:53071671-53070790 | 20130731
          Length = 163

 Score =  160 bits (405), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 90/195 (46%), Positives = 119/195 (61%), Gaps = 56/195 (28%)

Query: 2   ETQSSKRRRVYSLEPSKVVQSLFARNYLNYLVPALMKIKAKSPTSAEDSCRDCDVKKNVK 61
           + Q +KRRRVYS+EP+ +VQ++FARNYL+YLVPALMKIK  + +S E+        KNVK
Sbjct: 3   DAQQNKRRRVYSVEPNTIVQTIFARNYLSYLVPALMKIKENNISSKENI-------KNVK 55

Query: 62  YEVDMAMVFSAQGFAWSEGLKLKLQKDHDVNENVAAANTSFLKSESSTEEGSSRICDQNE 121
           YEVDMAMV SAQGFAWS+GLKLKLQK+ +VN+ VA  + S +++E+S +E          
Sbjct: 56  YEVDMAMVSSAQGFAWSDGLKLKLQKECNVND-VATNSRSIIENEASEDE---------- 104

Query: 122 IVPVDFCANXXXXXXXXXXXEMPELEKGLGRXXXXXXXXQLKSLRKLVPGGEEICDEDMV 181
                                                  ++K+L +L+PGGE+ICDE +V
Sbjct: 105 --------------------------------------EKMKNLIRLIPGGEDICDEQVV 126

Query: 182 GELESYVRCLQMQVN 196
            ELESY+RCLQMQ N
Sbjct: 127 NELESYIRCLQMQEN 141


>Medtr2g083470.1 | transcription factor/transcription regulator,
          putative | LC | chr2:35032963-35032414 | 20130731
          Length = 123

 Score = 74.3 bits (181), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 43/75 (57%), Positives = 55/75 (73%), Gaps = 4/75 (5%)

Query: 20 VQSLFARNYLNYLVPALMKIKAKSPTSAEDSCRDCDVKKNVKYEVDMAMVFSAQGFAWSE 79
          +Q++FARNYL+YL   L KIK  + +S +++       KNVKYEVD+AMVFSAQ FAW  
Sbjct: 6  MQTIFARNYLSYLDLTLTKIKENNNSSKDNNSNHI---KNVKYEVDIAMVFSAQDFAWGN 62

Query: 80 GLKLKLQKD-HDVNE 93
           LKLKLQK+ HDVN+
Sbjct: 63 ILKLKLQKECHDVND 77