Miyakogusa Predicted Gene

Lj4g3v2120440.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2120440.1 tr|Q647J9|Q647J9_MEDSA Homogentisate
phytylprenyltransferase OS=Medicago sativa GN=Hpt1 PE=2
SV=1,79.37,0,BACTERIOCHLOROPHYLL SYNTHASE,NULL;
PRENYLTRANSFERASES,NULL; seg,NULL; UbiA,UbiA prenyltransferase
fa,CUFF.50266.1
         (415 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g127800.3 | homogentisate phytyltransferase | HC | chr4:53...   637   0.0  
Medtr4g127800.1 | homogentisate phytyltransferase | HC | chr4:53...   637   0.0  
Medtr4g127800.2 | homogentisate phytyltransferase | HC | chr4:53...   637   0.0  
Medtr1g054305.1 | homogentisate phytyltransferase | HC | chr1:23...   170   2e-42
Medtr7g069210.1 | bacteriochlorophyll synthase, putative | HC | ...    60   5e-09
Medtr7g069210.2 | bacteriochlorophyll synthase, putative | HC | ...    60   6e-09

>Medtr4g127800.3 | homogentisate phytyltransferase | HC |
           chr4:53138714-53131274 | 20130731
          Length = 411

 Score =  637 bits (1643), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 324/412 (78%), Positives = 352/412 (85%), Gaps = 9/412 (2%)

Query: 12  MDSMLVGS------STTTVVGGNRWQTKNCINNHTA--SSNAPRASWLKWNIPKEYNXXX 63
           MDS+L GS       + T  GGN W++K C+NN+ +  SS A +AS  K  I  EYN   
Sbjct: 1   MDSLLAGSFPKSFSYSFTTTGGNLWRSKRCVNNYYSIPSSCASKASRHK-KIQNEYNTLR 59

Query: 64  XXXXXXNHQSKGIGGGSMYQECNRKYVVKAAPGKSFESEPDALDPKDVLGSVKNSLDAFY 123
                 NH  KG  G S YQECN K+VVKAAP +SFESE  A DPK++L +VKNSLDAFY
Sbjct: 60  FWQPSLNHYCKGAEGRSTYQECNGKFVVKAAPEQSFESEHPAFDPKNILVAVKNSLDAFY 119

Query: 124 RFSRPHTVIGTALSIISVSLLAVERLSDVSPLFFTGLLEAVVAALFMNIYIVGLNQLSDV 183
           RFSRPHTVIGTALSIISVSLLA E+LSD+SPLFFTG+LEAVVAALFMNIYIVGLNQLSDV
Sbjct: 120 RFSRPHTVIGTALSIISVSLLAAEKLSDISPLFFTGVLEAVVAALFMNIYIVGLNQLSDV 179

Query: 184 EIDKINKPYLPLASGEYSFNTGVIIVASFSILSFWLGWVVGSWPLFWALFISFMLGTAYS 243
           EIDKINKPYLPLASGEYSF TG IIV S SILSFWL W+VGSWPLFWALFISF+LGTAYS
Sbjct: 180 EIDKINKPYLPLASGEYSFATGAIIVVSSSILSFWLAWIVGSWPLFWALFISFVLGTAYS 239

Query: 244 IDVPWLRWKRFAVVAAMCILAVRAVIVQLAFFLHMQTFVFKRPALFSRPLIFATAFMSFF 303
           I+VP LRWKRFAV+AAMCIL+VRAVIVQLAFFLHMQTFV+KRP +FSRPLIFATAFMSFF
Sbjct: 240 INVPLLRWKRFAVLAAMCILSVRAVIVQLAFFLHMQTFVYKRPVVFSRPLIFATAFMSFF 299

Query: 304 SVVIALFKDIPDIDGDKIFGIQSFSVRLGQKRVFWICVALLEMAYGVALVVGAASPCLWS 363
           SVVIALFKDIPDI+GDKIFGIQSFSVRLGQKRVFWICV LLE+AYGV+LVVGA S CLWS
Sbjct: 300 SVVIALFKDIPDIEGDKIFGIQSFSVRLGQKRVFWICVTLLELAYGVSLVVGATSSCLWS 359

Query: 364 KIVTGLGHAVLAAILFYRAKSVDLRSKASITSFYMFIWKLFYAEYLLIPLVR 415
           KIVT LGHAVLA+ILF  AKSVDL+SKASITSFYMFIWKLFYAEY LIPLVR
Sbjct: 360 KIVTSLGHAVLASILFNHAKSVDLKSKASITSFYMFIWKLFYAEYFLIPLVR 411


>Medtr4g127800.1 | homogentisate phytyltransferase | HC |
           chr4:53139111-53131266 | 20130731
          Length = 411

 Score =  637 bits (1643), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 324/412 (78%), Positives = 352/412 (85%), Gaps = 9/412 (2%)

Query: 12  MDSMLVGS------STTTVVGGNRWQTKNCINNHTA--SSNAPRASWLKWNIPKEYNXXX 63
           MDS+L GS       + T  GGN W++K C+NN+ +  SS A +AS  K  I  EYN   
Sbjct: 1   MDSLLAGSFPKSFSYSFTTTGGNLWRSKRCVNNYYSIPSSCASKASRHK-KIQNEYNTLR 59

Query: 64  XXXXXXNHQSKGIGGGSMYQECNRKYVVKAAPGKSFESEPDALDPKDVLGSVKNSLDAFY 123
                 NH  KG  G S YQECN K+VVKAAP +SFESE  A DPK++L +VKNSLDAFY
Sbjct: 60  FWQPSLNHYCKGAEGRSTYQECNGKFVVKAAPEQSFESEHPAFDPKNILVAVKNSLDAFY 119

Query: 124 RFSRPHTVIGTALSIISVSLLAVERLSDVSPLFFTGLLEAVVAALFMNIYIVGLNQLSDV 183
           RFSRPHTVIGTALSIISVSLLA E+LSD+SPLFFTG+LEAVVAALFMNIYIVGLNQLSDV
Sbjct: 120 RFSRPHTVIGTALSIISVSLLAAEKLSDISPLFFTGVLEAVVAALFMNIYIVGLNQLSDV 179

Query: 184 EIDKINKPYLPLASGEYSFNTGVIIVASFSILSFWLGWVVGSWPLFWALFISFMLGTAYS 243
           EIDKINKPYLPLASGEYSF TG IIV S SILSFWL W+VGSWPLFWALFISF+LGTAYS
Sbjct: 180 EIDKINKPYLPLASGEYSFATGAIIVVSSSILSFWLAWIVGSWPLFWALFISFVLGTAYS 239

Query: 244 IDVPWLRWKRFAVVAAMCILAVRAVIVQLAFFLHMQTFVFKRPALFSRPLIFATAFMSFF 303
           I+VP LRWKRFAV+AAMCIL+VRAVIVQLAFFLHMQTFV+KRP +FSRPLIFATAFMSFF
Sbjct: 240 INVPLLRWKRFAVLAAMCILSVRAVIVQLAFFLHMQTFVYKRPVVFSRPLIFATAFMSFF 299

Query: 304 SVVIALFKDIPDIDGDKIFGIQSFSVRLGQKRVFWICVALLEMAYGVALVVGAASPCLWS 363
           SVVIALFKDIPDI+GDKIFGIQSFSVRLGQKRVFWICV LLE+AYGV+LVVGA S CLWS
Sbjct: 300 SVVIALFKDIPDIEGDKIFGIQSFSVRLGQKRVFWICVTLLELAYGVSLVVGATSSCLWS 359

Query: 364 KIVTGLGHAVLAAILFYRAKSVDLRSKASITSFYMFIWKLFYAEYLLIPLVR 415
           KIVT LGHAVLA+ILF  AKSVDL+SKASITSFYMFIWKLFYAEY LIPLVR
Sbjct: 360 KIVTSLGHAVLASILFNHAKSVDLKSKASITSFYMFIWKLFYAEYFLIPLVR 411


>Medtr4g127800.2 | homogentisate phytyltransferase | HC |
           chr4:53138796-53131274 | 20130731
          Length = 411

 Score =  637 bits (1643), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 324/412 (78%), Positives = 352/412 (85%), Gaps = 9/412 (2%)

Query: 12  MDSMLVGS------STTTVVGGNRWQTKNCINNHTA--SSNAPRASWLKWNIPKEYNXXX 63
           MDS+L GS       + T  GGN W++K C+NN+ +  SS A +AS  K  I  EYN   
Sbjct: 1   MDSLLAGSFPKSFSYSFTTTGGNLWRSKRCVNNYYSIPSSCASKASRHK-KIQNEYNTLR 59

Query: 64  XXXXXXNHQSKGIGGGSMYQECNRKYVVKAAPGKSFESEPDALDPKDVLGSVKNSLDAFY 123
                 NH  KG  G S YQECN K+VVKAAP +SFESE  A DPK++L +VKNSLDAFY
Sbjct: 60  FWQPSLNHYCKGAEGRSTYQECNGKFVVKAAPEQSFESEHPAFDPKNILVAVKNSLDAFY 119

Query: 124 RFSRPHTVIGTALSIISVSLLAVERLSDVSPLFFTGLLEAVVAALFMNIYIVGLNQLSDV 183
           RFSRPHTVIGTALSIISVSLLA E+LSD+SPLFFTG+LEAVVAALFMNIYIVGLNQLSDV
Sbjct: 120 RFSRPHTVIGTALSIISVSLLAAEKLSDISPLFFTGVLEAVVAALFMNIYIVGLNQLSDV 179

Query: 184 EIDKINKPYLPLASGEYSFNTGVIIVASFSILSFWLGWVVGSWPLFWALFISFMLGTAYS 243
           EIDKINKPYLPLASGEYSF TG IIV S SILSFWL W+VGSWPLFWALFISF+LGTAYS
Sbjct: 180 EIDKINKPYLPLASGEYSFATGAIIVVSSSILSFWLAWIVGSWPLFWALFISFVLGTAYS 239

Query: 244 IDVPWLRWKRFAVVAAMCILAVRAVIVQLAFFLHMQTFVFKRPALFSRPLIFATAFMSFF 303
           I+VP LRWKRFAV+AAMCIL+VRAVIVQLAFFLHMQTFV+KRP +FSRPLIFATAFMSFF
Sbjct: 240 INVPLLRWKRFAVLAAMCILSVRAVIVQLAFFLHMQTFVYKRPVVFSRPLIFATAFMSFF 299

Query: 304 SVVIALFKDIPDIDGDKIFGIQSFSVRLGQKRVFWICVALLEMAYGVALVVGAASPCLWS 363
           SVVIALFKDIPDI+GDKIFGIQSFSVRLGQKRVFWICV LLE+AYGV+LVVGA S CLWS
Sbjct: 300 SVVIALFKDIPDIEGDKIFGIQSFSVRLGQKRVFWICVTLLELAYGVSLVVGATSSCLWS 359

Query: 364 KIVTGLGHAVLAAILFYRAKSVDLRSKASITSFYMFIWKLFYAEYLLIPLVR 415
           KIVT LGHAVLA+ILF  AKSVDL+SKASITSFYMFIWKLFYAEY LIPLVR
Sbjct: 360 KIVTSLGHAVLASILFNHAKSVDLKSKASITSFYMFIWKLFYAEYFLIPLVR 411


>Medtr1g054305.1 | homogentisate phytyltransferase | HC |
           chr1:23377123-23369732 | 20130731
          Length = 392

 Score =  170 bits (431), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 114/306 (37%), Positives = 174/306 (56%), Gaps = 22/306 (7%)

Query: 120 DAFYRFSRPHTVIGTAL-SIISVSLLAVERLSDVSPLFFTGLLEAVVAALFMNIYIVGLN 178
           DAF+RF RPHT+ GTAL S   VS   +E  + +        L  + A +  N YIVG+N
Sbjct: 98  DAFWRFLRPHTIRGTALGSFALVSRALIENSNLIKWSLLLKALSGLFALICGNGYIVGIN 157

Query: 179 QLSDVEIDKINKPYLPLASGEYSFNTG---VIIVASFSILSFWLGWVVGSWPLFWALFIS 235
           Q+ D+ IDK+NKPYLP+A+G+ S  +    VI  A+  +L+  +G   GS+ +F      
Sbjct: 158 QIYDIGIDKVNKPYLPIAAGDLSVQSAWYLVIFFAAAGLLT--VGLNFGSF-IFSLYSFG 214

Query: 236 FMLGTAYSIDVPWLRWKRFAVVAAMCILAVRAVIVQLAFFLHMQTFVFKRPAL-----FS 290
             LGT YS  VP LR KRF V A + I  VR       F L+   +   R AL     +S
Sbjct: 215 LFLGTIYS--VPPLRMKRFPVAAFLIIATVRG------FLLNFGVYYATRAALGLAFEWS 266

Query: 291 RPLIFATAFMSFFSVVIALFKDIPDIDGDKIFGIQSFSVRLGQKRVFWICVALLEMAYGV 350
            P++F T F++FF++VIA+ KD+PD++GD+ + I +F+ +LG + + ++   +L M Y V
Sbjct: 267 SPVVFITTFVTFFALVIAITKDLPDVEGDRRYQISTFATKLGVRNISFLGSGILLMNYVV 326

Query: 351 ALVVGAASPCLWSKIVTGLGHAVLAAILFYRAKSVDLR--SKASITSFYMFIWKLFYAEY 408
            ++     P  + + +    HA+ A+ L Y+ + ++    +K +I+ FY FIW LFYAEY
Sbjct: 327 TILAAIYMPQAFRRWLLIPAHAIFASSLIYQVQILEKANYTKEAISGFYRFIWNLFYAEY 386

Query: 409 LLIPLV 414
            L P +
Sbjct: 387 ALFPFI 392


>Medtr7g069210.1 | bacteriochlorophyll synthase, putative | HC |
           chr7:25506539-25513007 | 20130731
          Length = 377

 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 85/192 (44%), Gaps = 14/192 (7%)

Query: 160 LLEAVVAALFMNIYIVGLNQLSDVEIDKINKPYLPLASGEYSFNT-----GVIIVASFSI 214
           +L  +++  F+  Y   LN   D EID IN+PY P+ SG  S N       V+++   + 
Sbjct: 127 ILCMMMSGPFLTGYTQTLNDWYDREIDAINEPYRPIPSGAISENEVINQIWVLLLGGLTT 186

Query: 215 LSFWLGWVVGSWPLFWALFISFMLGTAYSIDVPWLRWKRFAVVAAMCILAVRAVIVQLAF 274
                 W    +P+ + L +   L  +Y    P L+ K+   +      A+ A  + L +
Sbjct: 187 AGILDIWAGHDFPILFYLALGGSL-LSYIYSAPPLKLKQNGWIGN---FALGASYISLPW 242

Query: 275 FLHMQTFVFKRPALFSRPLIFATAFMSFFSVVIALFKDIPDIDGDKIFGIQSFSVRLGQK 334
           +     F    P +    L+++ A +      IA+  D   ++GD+  G+QS  V  G +
Sbjct: 243 WAGQALFGTLTPDVIVLTLLYSIAGLG-----IAIVNDFKSVEGDRALGLQSLPVAFGSE 297

Query: 335 RVFWICVALLEM 346
              WICV  +++
Sbjct: 298 TAKWICVGAIDI 309


>Medtr7g069210.2 | bacteriochlorophyll synthase, putative | HC |
           chr7:25506539-25513007 | 20130731
          Length = 378

 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 85/192 (44%), Gaps = 14/192 (7%)

Query: 160 LLEAVVAALFMNIYIVGLNQLSDVEIDKINKPYLPLASGEYSFNT-----GVIIVASFSI 214
           +L  +++  F+  Y   LN   D EID IN+PY P+ SG  S N       V+++   + 
Sbjct: 128 ILCMMMSGPFLTGYTQTLNDWYDREIDAINEPYRPIPSGAISENEVINQIWVLLLGGLTT 187

Query: 215 LSFWLGWVVGSWPLFWALFISFMLGTAYSIDVPWLRWKRFAVVAAMCILAVRAVIVQLAF 274
                 W    +P+ + L +   L  +Y    P L+ K+   +      A+ A  + L +
Sbjct: 188 AGILDIWAGHDFPILFYLALGGSL-LSYIYSAPPLKLKQNGWIGN---FALGASYISLPW 243

Query: 275 FLHMQTFVFKRPALFSRPLIFATAFMSFFSVVIALFKDIPDIDGDKIFGIQSFSVRLGQK 334
           +     F    P +    L+++ A +      IA+  D   ++GD+  G+QS  V  G +
Sbjct: 244 WAGQALFGTLTPDVIVLTLLYSIAGLG-----IAIVNDFKSVEGDRALGLQSLPVAFGSE 298

Query: 335 RVFWICVALLEM 346
              WICV  +++
Sbjct: 299 TAKWICVGAIDI 310