Miyakogusa Predicted Gene

Lj4g3v2096070.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2096070.1 tr|F2E7L1|F2E7L1_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2 SV=1,100,0,HISTONEH4,Histone
H4; no description,Histone-fold; Histone,Histone core; HISTONE
H4,Histone H4; seg,,CUFF.50257.1
         (103 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g128150.1 | core histone H2A/H2B/H3/H4 | LC | chr4:5332859...   164   2e-41
Medtr8g038460.1 | histone H4 domain protein | HC | chr8:14261400...   162   4e-41
Medtr7g099610.1 | histone H4 domain protein | HC | chr7:39955227...   162   4e-41
Medtr7g029510.1 | histone H4 domain protein | HC | chr7:10575158...   162   4e-41
Medtr5g063620.1 | histone H4 domain protein | HC | chr5:26358923...   162   4e-41
Medtr4g061920.1 | histone H4 domain protein | HC | chr4:22950041...   162   4e-41
Medtr4g061827.1 | histone H4 domain protein | HC | chr4:22898348...   162   4e-41
Medtr3g070920.1 | histone H4 domain protein | HC | chr3:31826060...   162   4e-41
Medtr3g462730.1 | histone H4 domain protein | HC | chr3:25084781...   162   4e-41
Medtr3g462510.1 | histone H4 domain protein | HC | chr3:24981857...   162   4e-41
Medtr3g462410.1 | histone H4 domain protein | HC | chr3:24924078...   162   4e-41
Medtr3g462400.1 | histone H4 domain protein | HC | chr3:24920479...   162   4e-41
Medtr3g061440.1 | histone H4 domain protein | HC | chr3:24497665...   162   4e-41
Medtr3g054380.1 | histone H4 domain protein | HC | chr3:21584972...   162   4e-41
Medtr2g096100.1 | histone H4 domain protein | HC | chr2:41027213...   162   4e-41
Medtr7g029520.1 | histone H4 | LC | chr7:10580660-10582755 | 201...    87   3e-18

>Medtr4g128150.1 | core histone H2A/H2B/H3/H4 | LC |
           chr4:53328594-53330943 | 20130731
          Length = 383

 Score =  164 bits (415), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 81/81 (100%), Positives = 81/81 (100%)

Query: 22  VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81
           VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT
Sbjct: 22  VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81

Query: 82  VTAMDVVYALKRQGRTLYGFG 102
           VTAMDVVYALKRQGRTLYGFG
Sbjct: 82  VTAMDVVYALKRQGRTLYGFG 102


>Medtr8g038460.1 | histone H4 domain protein | HC |
           chr8:14261400-14260862 | 20130731
          Length = 103

 Score =  162 bits (411), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 82/82 (100%), Positives = 82/82 (100%)

Query: 22  VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81
           VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT
Sbjct: 22  VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81

Query: 82  VTAMDVVYALKRQGRTLYGFGG 103
           VTAMDVVYALKRQGRTLYGFGG
Sbjct: 82  VTAMDVVYALKRQGRTLYGFGG 103


>Medtr7g099610.1 | histone H4 domain protein | HC |
           chr7:39955227-39954629 | 20130731
          Length = 103

 Score =  162 bits (411), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 82/82 (100%), Positives = 82/82 (100%)

Query: 22  VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81
           VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT
Sbjct: 22  VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81

Query: 82  VTAMDVVYALKRQGRTLYGFGG 103
           VTAMDVVYALKRQGRTLYGFGG
Sbjct: 82  VTAMDVVYALKRQGRTLYGFGG 103


>Medtr7g029510.1 | histone H4 domain protein | HC |
           chr7:10575158-10575719 | 20130731
          Length = 103

 Score =  162 bits (411), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 82/82 (100%), Positives = 82/82 (100%)

Query: 22  VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81
           VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT
Sbjct: 22  VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81

Query: 82  VTAMDVVYALKRQGRTLYGFGG 103
           VTAMDVVYALKRQGRTLYGFGG
Sbjct: 82  VTAMDVVYALKRQGRTLYGFGG 103


>Medtr5g063620.1 | histone H4 domain protein | HC |
           chr5:26358923-26358380 | 20130731
          Length = 103

 Score =  162 bits (411), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 82/82 (100%), Positives = 82/82 (100%)

Query: 22  VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81
           VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT
Sbjct: 22  VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81

Query: 82  VTAMDVVYALKRQGRTLYGFGG 103
           VTAMDVVYALKRQGRTLYGFGG
Sbjct: 82  VTAMDVVYALKRQGRTLYGFGG 103


>Medtr4g061920.1 | histone H4 domain protein | HC |
           chr4:22950041-22950557 | 20130731
          Length = 103

 Score =  162 bits (411), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 82/82 (100%), Positives = 82/82 (100%)

Query: 22  VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81
           VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT
Sbjct: 22  VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81

Query: 82  VTAMDVVYALKRQGRTLYGFGG 103
           VTAMDVVYALKRQGRTLYGFGG
Sbjct: 82  VTAMDVVYALKRQGRTLYGFGG 103


>Medtr4g061827.1 | histone H4 domain protein | HC |
           chr4:22898348-22898905 | 20130731
          Length = 103

 Score =  162 bits (411), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 82/82 (100%), Positives = 82/82 (100%)

Query: 22  VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81
           VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT
Sbjct: 22  VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81

Query: 82  VTAMDVVYALKRQGRTLYGFGG 103
           VTAMDVVYALKRQGRTLYGFGG
Sbjct: 82  VTAMDVVYALKRQGRTLYGFGG 103


>Medtr3g070920.1 | histone H4 domain protein | HC |
           chr3:31826060-31825342 | 20130731
          Length = 103

 Score =  162 bits (411), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 82/82 (100%), Positives = 82/82 (100%)

Query: 22  VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81
           VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT
Sbjct: 22  VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81

Query: 82  VTAMDVVYALKRQGRTLYGFGG 103
           VTAMDVVYALKRQGRTLYGFGG
Sbjct: 82  VTAMDVVYALKRQGRTLYGFGG 103


>Medtr3g462730.1 | histone H4 domain protein | HC |
           chr3:25084781-25085408 | 20130731
          Length = 103

 Score =  162 bits (411), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 82/82 (100%), Positives = 82/82 (100%)

Query: 22  VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81
           VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT
Sbjct: 22  VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81

Query: 82  VTAMDVVYALKRQGRTLYGFGG 103
           VTAMDVVYALKRQGRTLYGFGG
Sbjct: 82  VTAMDVVYALKRQGRTLYGFGG 103


>Medtr3g462510.1 | histone H4 domain protein | HC |
           chr3:24981857-24982390 | 20130731
          Length = 103

 Score =  162 bits (411), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 82/82 (100%), Positives = 82/82 (100%)

Query: 22  VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81
           VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT
Sbjct: 22  VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81

Query: 82  VTAMDVVYALKRQGRTLYGFGG 103
           VTAMDVVYALKRQGRTLYGFGG
Sbjct: 82  VTAMDVVYALKRQGRTLYGFGG 103


>Medtr3g462410.1 | histone H4 domain protein | HC |
           chr3:24924078-24923241 | 20130731
          Length = 103

 Score =  162 bits (411), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 82/82 (100%), Positives = 82/82 (100%)

Query: 22  VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81
           VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT
Sbjct: 22  VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81

Query: 82  VTAMDVVYALKRQGRTLYGFGG 103
           VTAMDVVYALKRQGRTLYGFGG
Sbjct: 82  VTAMDVVYALKRQGRTLYGFGG 103


>Medtr3g462400.1 | histone H4 domain protein | HC |
           chr3:24920479-24919662 | 20130731
          Length = 103

 Score =  162 bits (411), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 82/82 (100%), Positives = 82/82 (100%)

Query: 22  VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81
           VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT
Sbjct: 22  VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81

Query: 82  VTAMDVVYALKRQGRTLYGFGG 103
           VTAMDVVYALKRQGRTLYGFGG
Sbjct: 82  VTAMDVVYALKRQGRTLYGFGG 103


>Medtr3g061440.1 | histone H4 domain protein | HC |
           chr3:24497665-24497102 | 20130731
          Length = 103

 Score =  162 bits (411), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 82/82 (100%), Positives = 82/82 (100%)

Query: 22  VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81
           VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT
Sbjct: 22  VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81

Query: 82  VTAMDVVYALKRQGRTLYGFGG 103
           VTAMDVVYALKRQGRTLYGFGG
Sbjct: 82  VTAMDVVYALKRQGRTLYGFGG 103


>Medtr3g054380.1 | histone H4 domain protein | HC |
           chr3:21584972-21584416 | 20130731
          Length = 103

 Score =  162 bits (411), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 82/82 (100%), Positives = 82/82 (100%)

Query: 22  VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81
           VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT
Sbjct: 22  VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81

Query: 82  VTAMDVVYALKRQGRTLYGFGG 103
           VTAMDVVYALKRQGRTLYGFGG
Sbjct: 82  VTAMDVVYALKRQGRTLYGFGG 103


>Medtr2g096100.1 | histone H4 domain protein | HC |
           chr2:41027213-41028070 | 20130731
          Length = 103

 Score =  162 bits (411), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 82/82 (100%), Positives = 82/82 (100%)

Query: 22  VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81
           VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT
Sbjct: 22  VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81

Query: 82  VTAMDVVYALKRQGRTLYGFGG 103
           VTAMDVVYALKRQGRTLYGFGG
Sbjct: 82  VTAMDVVYALKRQGRTLYGFGG 103


>Medtr7g029520.1 | histone H4 | LC | chr7:10580660-10582755 |
          20130731
          Length = 406

 Score = 87.4 bits (215), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 42/50 (84%), Positives = 45/50 (90%)

Query: 27 IQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEH 76
          + GITKPAIRRLARR GVKRISGLIYEE RG+LKIFL+N I DAVTYTEH
Sbjct: 1  MSGITKPAIRRLARRVGVKRISGLIYEEIRGLLKIFLQNKILDAVTYTEH 50