Miyakogusa Predicted Gene

Lj4g3v2094890.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2094890.2 tr|A4S0T7|A4S0T7_OSTLU Predicted protein
OS=Ostreococcus lucimarinus (strain CCE9901)
GN=OSTLU_32860,26.29,2e-17,seg,NULL; no description,NULL; SET,SET
domain; SUBFAMILY NOT NAMED,NULL; UNCHARACTERIZED PUTATIVE
ME,CUFF.50241.2
         (466 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g128240.1 | rubisco methyltransferase family protein | HC ...   716   0.0  
Medtr3g082690.1 | rubisco methyltransferase family protein | HC ...    71   2e-12

>Medtr4g128240.1 | rubisco methyltransferase family protein | HC |
           chr4:53384921-53373038 | 20130731
          Length = 639

 Score =  716 bits (1849), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 348/467 (74%), Positives = 391/467 (83%), Gaps = 3/467 (0%)

Query: 1   MDTDEVCSIVLELSEXXXXXXXXXXXXQCKGFSPKERIYLN-SSESGWENATAKRLLEIE 59
           MD+DE CS+VLELSE            +CKGF PKERI+L  SS   W N T K LL+I 
Sbjct: 93  MDSDEECSLVLELSENDPFFDEKKKLLRCKGFGPKERIHLKCSSAPSWMNDTVKILLQIA 152

Query: 60  RIIQLNELELYFAEDNGCTSVDFYSPRNELEALNSVVFLIDISLSSCSHLHTNILQGLRQ 119
           +IIQLNELELYFAED+   SV+FYS RNELEALNS+V L D SLSSC H HTN+LQGL+Q
Sbjct: 153 KIIQLNELELYFAEDDA--SVEFYSSRNELEALNSIVSLTDKSLSSCPHFHTNVLQGLQQ 210

Query: 120 TMLDLISDFGDKNSVKGVVEIDHNCDQEEHMIEWGESNGLKTQLKIAYVEGAGRGAIATK 179
            +LDLISDFGD++++KGV+E  H+C++EEH+IEWG+S+G+KT LKIAYVEGAGRG IA K
Sbjct: 211 KILDLISDFGDQSNMKGVLEKHHSCEREEHLIEWGKSHGVKTGLKIAYVEGAGRGMIAGK 270

Query: 180 DLKVGDXXXXXXXXXXXXXXXVHETDMYQVLKMVDDISSETILLLWSMKEKYNCDSKFKI 239
           DLKVGD               V ETDMY++LK VD ISSETILLLWSMKEKYNCDSKFKI
Sbjct: 271 DLKVGDIAIEIPVSLIISEELVLETDMYRLLKEVDGISSETILLLWSMKEKYNCDSKFKI 330

Query: 240 YFDTLPEKFNTGLSFGIEAIAMLDGTLLFEEIMLARQHLHAQYDELFPVLCDEFPDIFPR 299
           YFDTLPEKFNTGLSFGIEAI MLDGTLLFEEIM +RQHLHAQYDEL P LC+ FPDIFP 
Sbjct: 331 YFDTLPEKFNTGLSFGIEAITMLDGTLLFEEIMQSRQHLHAQYDELVPALCNGFPDIFPP 390

Query: 300 ELYTREKFIWACELWYSNSMKIMYPDGKLRTCLIPIAGFLNHSLCPHVMHYGKVDPSTNS 359
           E+YT E F+WACELWYSNSMKIMY DGKLRTCLIP+AGFLNHSLCPH+ HYGKVDPSTNS
Sbjct: 391 EIYTWENFLWACELWYSNSMKIMYSDGKLRTCLIPLAGFLNHSLCPHITHYGKVDPSTNS 450

Query: 360 LRFCLSRPCKSGEECCLSYGSFPSSHLLTFYGFLPQGENLYDVIPLDIDGSDVNSIEDKP 419
           L+FCLSR C+SGEECCLSYG+F SSH +TFYGFLPQG+N YDVIPLDID SDV+SIEDKP
Sbjct: 451 LKFCLSRSCRSGEECCLSYGNFSSSHFITFYGFLPQGDNPYDVIPLDIDSSDVDSIEDKP 510

Query: 420 ESNWTTHMVRGTWLSNNHSIFHYGLPSPLLDHLRKSRSPTLHTKTYV 466
            SNWTTHMVRGTWLSNNHSIF+YGLPSPLLDHLR+SRS  + TKT++
Sbjct: 511 VSNWTTHMVRGTWLSNNHSIFYYGLPSPLLDHLRRSRSTVMQTKTFL 557


>Medtr3g082690.1 | rubisco methyltransferase family protein | HC |
           chr3:37307346-37311457 | 20130731
          Length = 497

 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 76/147 (51%), Gaps = 5/147 (3%)

Query: 262 LDGTLLFEEIMLARQHLHAQYDELFPVLCDEFPDIFPRELYTREKFIWACELWYSNSMKI 321
           L+ + + E  +    ++   Y+++   +  ++PD FP E++  E F W+  + +S  +++
Sbjct: 185 LEASQIRERAIERTNNVIGTYNDMRVRIFSKYPDFFPEEVFNIESFKWSFGILFSRMVRL 244

Query: 322 MYPDGKLRTCLIPIAGFLNHSLCPHVMHYGKVDPSTNSLRFCLSRPCKSGEECCLSYGSF 381
              DGK    L+P A  +NHS C  V  +   D S+  + F   RP + GE+  +SYG  
Sbjct: 245 PSMDGK--NALVPWADMMNHS-C-EVETFLDYDKSSKGIVFPTDRPYQPGEQVFISYGKK 300

Query: 382 PSSHLLTFYGFLP-QGENLYDVIPLDI 407
            +  LL  YGF+P +G N  D + L +
Sbjct: 301 SNGELLLSYGFVPKEGTNPSDSVELSL 327