Miyakogusa Predicted Gene

Lj4g3v2023910.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2023910.1 tr|Q6K9C2|Q6K9C2_ORYSJ Os02g0610700 protein
OS=Oryza sativa subsp. japonica GN=OJ1476_F05.21-1 PE=4 ,51.28,2e-19,
,CUFF.50168.1
         (145 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g129320.1 | hypothetical protein | HC | chr4:53874143-5387...   207   2e-54
Medtr4g129300.1 | hypothetical protein | HC | chr4:53864356-5386...   124   2e-29

>Medtr4g129320.1 | hypothetical protein | HC |
           chr4:53874143-53871617 | 20130731
          Length = 143

 Score =  207 bits (528), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 105/145 (72%), Positives = 117/145 (80%), Gaps = 5/145 (3%)

Query: 2   ASNILPLTNTHLVPFPVQHRSL-TVVKWGWKREQDVSIVSNTPRSQSFRVLATASNTKVV 60
           +S ILPL+N     F   H S  T  KWGW+REQD S+ SN  +SQ+FRVLA  +    V
Sbjct: 3   SSTILPLSNAQFPSFHHTHHSFPTTAKWGWRREQDASMASNRTQSQAFRVLANPN----V 58

Query: 61  SSGKAGSKNDVIMVDPVEAKQLAAKQMERIKAKEKLKRRRQIEAINGAWAMIGLTAGLVI 120
           SSGK GSK DVIMVDPVEAK+LAAKQME IKAKEKLK+RRQIEAINGAWAMIGLTAGLVI
Sbjct: 59  SSGKDGSKKDVIMVDPVEAKRLAAKQMEIIKAKEKLKKRRQIEAINGAWAMIGLTAGLVI 118

Query: 121 EGQTGKNIMTQLQDYFDAIIHFFVR 145
           EGQTGKNI+TQLQDYF AI+HFFV+
Sbjct: 119 EGQTGKNIITQLQDYFGAIVHFFVK 143


>Medtr4g129300.1 | hypothetical protein | HC |
           chr4:53864356-53862799 | 20130731
          Length = 102

 Score =  124 bits (312), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 68/124 (54%), Positives = 79/124 (63%), Gaps = 25/124 (20%)

Query: 2   ASNILPLTNTHLVPFPVQHRSLTVVKWGWKREQDVSIVSNTPRSQSFRVLATASNTKVVS 61
           +S+I+PLTN     F   H  LT+ K                      VL   S+ ++VS
Sbjct: 4   SSSIIPLTNAQFASFHTNHSFLTIAK----------------------VL---SSDEIVS 38

Query: 62  SGKAGSKNDVIMVDPVEAKQLAAKQMERIKAKEKLKRRRQIEAINGAWAMIGLTAGLVIE 121
           SGK GSK DVIMVDP+EAK+L AKQMERIK KEKL++R QIEA NGAWAMIGLT GL IE
Sbjct: 39  SGKDGSKKDVIMVDPIEAKRLVAKQMERIKEKEKLEKRHQIEATNGAWAMIGLTVGLAIE 98

Query: 122 GQTG 125
           GQTG
Sbjct: 99  GQTG 102