Miyakogusa Predicted Gene
- Lj4g3v2020600.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2020600.1 Non Characterized Hit- tr|I1JGU1|I1JGU1_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,80.4,0,P-loop
containing nucleoside triphosphate hydrolases,NULL;
AFG1_ATPase,ATPase, AFG1-like; no descrip,CUFF.50204.1
(502 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g129950.2 | AFG1-family ATPase | HC | chr4:54196842-541918... 826 0.0
Medtr4g129950.1 | AFG1-family ATPase | HC | chr4:54196842-541918... 611 e-175
Medtr4g129950.3 | AFG1-family ATPase | HC | chr4:54196842-541917... 611 e-175
Medtr1g012370.4 | AFG1-family ATPase | HC | chr1:2443925-2434441... 174 2e-43
Medtr1g012370.2 | AFG1-family ATPase | HC | chr1:2443925-2434182... 174 2e-43
Medtr1g012370.1 | AFG1-family ATPase | HC | chr1:2443929-2434267... 174 2e-43
Medtr1g012370.3 | AFG1-family ATPase | HC | chr1:2443929-2434182... 174 2e-43
>Medtr4g129950.2 | AFG1-family ATPase | HC | chr4:54196842-54191819
| 20130731
Length = 500
Score = 826 bits (2134), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/505 (79%), Positives = 444/505 (87%), Gaps = 8/505 (1%)
Query: 1 MRRVVRPVRQLAQASQRHQKCILITDPVAETPFHFEKSSHLHSSAYRVLDHHVETTLAKN 60
MR VR +RQL QR Q C++I + VAE P +FEK +H+SAYRVLD E+ + KN
Sbjct: 1 MRISVRSLRQLRHVYQR-QSCVMINNLVAEKPCYFEKCCQIHNSAYRVLDQ-AESNIFKN 58
Query: 61 SSF---TTRGLSIDAAKLTHGEIERAGPLVEYERRIATGELVDGDNFQLYTLTELQRLYD 117
F +TR +S DA K+T+G +++GPLVEYERRIA GELVDGD+ Q+ TLTELQRLYD
Sbjct: 59 HPFINTSTRSISADAVKITNGVTKKSGPLVEYERRIANGELVDGDSCQVETLTELQRLYD 118
Query: 118 ELVASADTCQLDRDAAEKPVRSGWLWSRLLYHPSHSPVKGLYLYGGVGTGKTMLMDLFFN 177
ELV AD CQLDR++ EKPVR GWLWSRLL HPSHSPVKGLYLYGGVGTGKTMLMDLF++
Sbjct: 119 ELVEHADECQLDRNS-EKPVRHGWLWSRLLSHPSHSPVKGLYLYGGVGTGKTMLMDLFYD 177
Query: 178 QLPSNWRKKRIHFHDFMLNVHSLLQKHMGLSDPLEVVAEEISDEAILLCLDEFMVTDVAD 237
QLPSNW+KKRIHFHDFMLNVHSLLQKH GLSDPL+VVA EISDEA+LLCLDEFMVTDVAD
Sbjct: 178 QLPSNWKKKRIHFHDFMLNVHSLLQKHKGLSDPLDVVAGEISDEAVLLCLDEFMVTDVAD 237
Query: 238 ALLLNRLFKHLFSKGAILVATSNRVPDNLYEGGLQRDLFLPFIATLKERCVVHEIGSSID 297
AL+LNRLF+HLFSKG ILV+TSNR PDNLYEGGLQRDLFLPFIATLKERC+ HEIGSS D
Sbjct: 238 ALILNRLFRHLFSKGIILVSTSNRAPDNLYEGGLQRDLFLPFIATLKERCIAHEIGSSTD 297
Query: 298 YRKMTSGEQGFYLVGSGLSDFLKKRFQDLIGEGTPTPQVVEVVMGRTLHVPLGANGCAYF 357
YRKMTSG QGFYLVGS S FLKK+FQ LIGEGTPTPQ VEVVMGR LHVPLGANGCAYF
Sbjct: 298 YRKMTSGGQGFYLVGSDSSGFLKKKFQQLIGEGTPTPQEVEVVMGRKLHVPLGANGCAYF 357
Query: 358 PFEELCDKPLGAADYFGLFKNFHTLALDGIPVFGVSNKSAAHRFVTLIDVMYENRARLLC 417
PFEELCDKPLGAADYFGLFK FHTLALDGIP+FG+SNK+AAHRFVTL+DV+YEN+ARLLC
Sbjct: 358 PFEELCDKPLGAADYFGLFKKFHTLALDGIPIFGLSNKAAAHRFVTLVDVIYENKARLLC 417
Query: 418 TADGSPQDLFEKVVTVSEAKQMAPRTSSRSRKNDVIDLCVDNELGFAKDRTISRLTELNS 477
+ADGSP DLF+K+VT+SEAKQ APRTSSRSRKND DLCVDNELGFAKDRTISRLTE+NS
Sbjct: 418 SADGSPLDLFQKIVTISEAKQRAPRTSSRSRKNDEADLCVDNELGFAKDRTISRLTEINS 477
Query: 478 KEYLEHHAATLAEKKERVDQNVLEA 502
+EYLEHHA LAEKKER DQNV+EA
Sbjct: 478 REYLEHHA--LAEKKEREDQNVVEA 500
>Medtr4g129950.1 | AFG1-family ATPase | HC | chr4:54196842-54191869
| 20130731
Length = 400
Score = 611 bits (1576), Expect = e-175, Method: Compositional matrix adjust.
Identities = 296/384 (77%), Positives = 327/384 (85%), Gaps = 6/384 (1%)
Query: 1 MRRVVRPVRQLAQASQRHQKCILITDPVAETPFHFEKSSHLHSSAYRVLDHHVETTLAKN 60
MR VR +RQL QR Q C++I + VAE P +FEK +H+SAYRVLD E+ + KN
Sbjct: 1 MRISVRSLRQLRHVYQR-QSCVMINNLVAEKPCYFEKCCQIHNSAYRVLDQ-AESNIFKN 58
Query: 61 SSF---TTRGLSIDAAKLTHGEIERAGPLVEYERRIATGELVDGDNFQLYTLTELQRLYD 117
F +TR +S DA K+T+G +++GPLVEYERRIA GELVDGD+ Q+ TLTELQRLYD
Sbjct: 59 HPFINTSTRSISADAVKITNGVTKKSGPLVEYERRIANGELVDGDSCQVETLTELQRLYD 118
Query: 118 ELVASADTCQLDRDAAEKPVRSGWLWSRLLYHPSHSPVKGLYLYGGVGTGKTMLMDLFFN 177
ELV AD CQLDR++ EKPVR GWLWSRLL HPSHSPVKGLYLYGGVGTGKTMLMDLF++
Sbjct: 119 ELVEHADECQLDRNS-EKPVRHGWLWSRLLSHPSHSPVKGLYLYGGVGTGKTMLMDLFYD 177
Query: 178 QLPSNWRKKRIHFHDFMLNVHSLLQKHMGLSDPLEVVAEEISDEAILLCLDEFMVTDVAD 237
QLPSNW+KKRIHFHDFMLNVHSLLQKH GLSDPL+VVA EISDEA+LLCLDEFMVTDVAD
Sbjct: 178 QLPSNWKKKRIHFHDFMLNVHSLLQKHKGLSDPLDVVAGEISDEAVLLCLDEFMVTDVAD 237
Query: 238 ALLLNRLFKHLFSKGAILVATSNRVPDNLYEGGLQRDLFLPFIATLKERCVVHEIGSSID 297
AL+LNRLF+HLFSKG ILV+TSNR PDNLYEGGLQRDLFLPFIATLKERC+ HEIGSS D
Sbjct: 238 ALILNRLFRHLFSKGIILVSTSNRAPDNLYEGGLQRDLFLPFIATLKERCIAHEIGSSTD 297
Query: 298 YRKMTSGEQGFYLVGSGLSDFLKKRFQDLIGEGTPTPQVVEVVMGRTLHVPLGANGCAYF 357
YRKMTSG QGFYLVGS S FLKK+FQ LIGEGTPTPQ VEVVMGR LHVPLGANGCAYF
Sbjct: 298 YRKMTSGGQGFYLVGSDSSGFLKKKFQQLIGEGTPTPQEVEVVMGRKLHVPLGANGCAYF 357
Query: 358 PFEELCDKPLGAADYFGLFKNFHT 381
PFEELCDKPLGAADYFGLF +
Sbjct: 358 PFEELCDKPLGAADYFGLFSKLYV 381
>Medtr4g129950.3 | AFG1-family ATPase | HC | chr4:54196842-54191756
| 20130731
Length = 400
Score = 611 bits (1576), Expect = e-175, Method: Compositional matrix adjust.
Identities = 296/384 (77%), Positives = 327/384 (85%), Gaps = 6/384 (1%)
Query: 1 MRRVVRPVRQLAQASQRHQKCILITDPVAETPFHFEKSSHLHSSAYRVLDHHVETTLAKN 60
MR VR +RQL QR Q C++I + VAE P +FEK +H+SAYRVLD E+ + KN
Sbjct: 1 MRISVRSLRQLRHVYQR-QSCVMINNLVAEKPCYFEKCCQIHNSAYRVLDQ-AESNIFKN 58
Query: 61 SSF---TTRGLSIDAAKLTHGEIERAGPLVEYERRIATGELVDGDNFQLYTLTELQRLYD 117
F +TR +S DA K+T+G +++GPLVEYERRIA GELVDGD+ Q+ TLTELQRLYD
Sbjct: 59 HPFINTSTRSISADAVKITNGVTKKSGPLVEYERRIANGELVDGDSCQVETLTELQRLYD 118
Query: 118 ELVASADTCQLDRDAAEKPVRSGWLWSRLLYHPSHSPVKGLYLYGGVGTGKTMLMDLFFN 177
ELV AD CQLDR++ EKPVR GWLWSRLL HPSHSPVKGLYLYGGVGTGKTMLMDLF++
Sbjct: 119 ELVEHADECQLDRNS-EKPVRHGWLWSRLLSHPSHSPVKGLYLYGGVGTGKTMLMDLFYD 177
Query: 178 QLPSNWRKKRIHFHDFMLNVHSLLQKHMGLSDPLEVVAEEISDEAILLCLDEFMVTDVAD 237
QLPSNW+KKRIHFHDFMLNVHSLLQKH GLSDPL+VVA EISDEA+LLCLDEFMVTDVAD
Sbjct: 178 QLPSNWKKKRIHFHDFMLNVHSLLQKHKGLSDPLDVVAGEISDEAVLLCLDEFMVTDVAD 237
Query: 238 ALLLNRLFKHLFSKGAILVATSNRVPDNLYEGGLQRDLFLPFIATLKERCVVHEIGSSID 297
AL+LNRLF+HLFSKG ILV+TSNR PDNLYEGGLQRDLFLPFIATLKERC+ HEIGSS D
Sbjct: 238 ALILNRLFRHLFSKGIILVSTSNRAPDNLYEGGLQRDLFLPFIATLKERCIAHEIGSSTD 297
Query: 298 YRKMTSGEQGFYLVGSGLSDFLKKRFQDLIGEGTPTPQVVEVVMGRTLHVPLGANGCAYF 357
YRKMTSG QGFYLVGS S FLKK+FQ LIGEGTPTPQ VEVVMGR LHVPLGANGCAYF
Sbjct: 298 YRKMTSGGQGFYLVGSDSSGFLKKKFQQLIGEGTPTPQEVEVVMGRKLHVPLGANGCAYF 357
Query: 358 PFEELCDKPLGAADYFGLFKNFHT 381
PFEELCDKPLGAADYFGLF +
Sbjct: 358 PFEELCDKPLGAADYFGLFSKLYV 381
>Medtr1g012370.4 | AFG1-family ATPase | HC | chr1:2443925-2434441 |
20130731
Length = 520
Score = 174 bits (442), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 122/408 (29%), Positives = 187/408 (45%), Gaps = 75/408 (18%)
Query: 150 PSHSPV-KGLYLYGGVGTGKTMLMDLFFNQLPSNWR-KKRIHFHDFMLNV----HSLLQK 203
P+ P KGLY+YG VG+GKTMLMD+F++ + ++R HFH+ ML + H +K
Sbjct: 83 PTAPPAPKGLYIYGNVGSGKTMLMDMFYSATEGIVKHRRRYHFHEAMLRINEHMHKTWKK 142
Query: 204 HM-------GLSD-----PLEVVAEE--------------------ISDE---------- 221
M G+S P + A+E ++D+
Sbjct: 143 QMEEKPLQSGISSWIMNLPFDTKAKEWLAAEERYKKEVQMKHILPDVADKFFLDREGEEK 202
Query: 222 -AILLCLDEFMVTDVADALLLNRLFKHLFSKGAILVATSNRVPDNLYEGGLQRDLFLPFI 280
A +LC DE DV + L+ + L S G I+VATSNR P +L E + + F +
Sbjct: 203 GANILCFDEIQTVDVFAIVALSGILSRLLSSGTIIVATSNRAPKDLNEANMVPEFFQNLL 262
Query: 281 ATLKERCVVHEIGSSIDYRKMTSGEQG-----FYLVGSGLSDFLKKRFQDLIGE--GTPT 333
+ L+E C +GS IDYR+ + + + + +K++QD G G
Sbjct: 263 SNLEEHCEKVLVGSEIDYRRFIAQRSENRVNYLWPIERETINKFEKKWQDATGRFGGKVI 322
Query: 334 PQVVEVVMGRTLHVPLGANGCAYFPFEELCDKPLGAADYFGLFKNFHTLALDGIPVFGVS 393
+ V+ GRTL VP G A F F+ LC +PLGAADY + +N+HT+ + IP+ +
Sbjct: 323 SNTISVMFGRTLEVPESCEGVARFTFDYLCGRPLGAADYIAVAENYHTVFISDIPMMSMR 382
Query: 394 NKSAAHRFVTLIDVMYENRARLLCTADGSPQDLF----EKVVTVSEAKQMAPRTSSRSRK 449
+ A RF+TLID +Y + + L C A S +LF E + E+ Q +
Sbjct: 383 IRDKARRFITLIDELYNHHSCLCCLASSSIDELFQGTEEGTLFDLESFQFETEAEGSKLR 442
Query: 450 NDVI---------------DLCVDNELGFAKDRTISRLTELNSKEYLE 482
DV+ + E F R +SRL E+ ++ YL+
Sbjct: 443 RDVLAEGNVGSGGTPVGITSILSGQEELFTFQRAVSRLIEMQTQLYLD 490
>Medtr1g012370.2 | AFG1-family ATPase | HC | chr1:2443925-2434182 |
20130731
Length = 497
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 122/408 (29%), Positives = 187/408 (45%), Gaps = 75/408 (18%)
Query: 150 PSHSPV-KGLYLYGGVGTGKTMLMDLFFNQLPSNWR-KKRIHFHDFMLNV----HSLLQK 203
P+ P KGLY+YG VG+GKTMLMD+F++ + ++R HFH+ ML + H +K
Sbjct: 60 PTAPPAPKGLYIYGNVGSGKTMLMDMFYSATEGIVKHRRRYHFHEAMLRINEHMHKTWKK 119
Query: 204 HM-------GLSD-----PLEVVAEE--------------------ISDE---------- 221
M G+S P + A+E ++D+
Sbjct: 120 QMEEKPLQSGISSWIMNLPFDTKAKEWLAAEERYKKEVQMKHILPDVADKFFLDREGEEK 179
Query: 222 -AILLCLDEFMVTDVADALLLNRLFKHLFSKGAILVATSNRVPDNLYEGGLQRDLFLPFI 280
A +LC DE DV + L+ + L S G I+VATSNR P +L E + + F +
Sbjct: 180 GANILCFDEIQTVDVFAIVALSGILSRLLSSGTIIVATSNRAPKDLNEANMVPEFFQNLL 239
Query: 281 ATLKERCVVHEIGSSIDYRKMTSGEQG-----FYLVGSGLSDFLKKRFQDLIGE--GTPT 333
+ L+E C +GS IDYR+ + + + + +K++QD G G
Sbjct: 240 SNLEEHCEKVLVGSEIDYRRFIAQRSENRVNYLWPIERETINKFEKKWQDATGRFGGKVI 299
Query: 334 PQVVEVVMGRTLHVPLGANGCAYFPFEELCDKPLGAADYFGLFKNFHTLALDGIPVFGVS 393
+ V+ GRTL VP G A F F+ LC +PLGAADY + +N+HT+ + IP+ +
Sbjct: 300 SNTISVMFGRTLEVPESCEGVARFTFDYLCGRPLGAADYIAVAENYHTVFISDIPMMSMR 359
Query: 394 NKSAAHRFVTLIDVMYENRARLLCTADGSPQDLF----EKVVTVSEAKQMAPRTSSRSRK 449
+ A RF+TLID +Y + + L C A S +LF E + E+ Q +
Sbjct: 360 IRDKARRFITLIDELYNHHSCLCCLASSSIDELFQGTEEGTLFDLESFQFETEAEGSKLR 419
Query: 450 NDVI---------------DLCVDNELGFAKDRTISRLTELNSKEYLE 482
DV+ + E F R +SRL E+ ++ YL+
Sbjct: 420 RDVLAEGNVGSGGTPVGITSILSGQEELFTFQRAVSRLIEMQTQLYLD 467
>Medtr1g012370.1 | AFG1-family ATPase | HC | chr1:2443929-2434267 |
20130731
Length = 621
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 122/408 (29%), Positives = 187/408 (45%), Gaps = 75/408 (18%)
Query: 150 PSHSPV-KGLYLYGGVGTGKTMLMDLFFNQLPSNWR-KKRIHFHDFMLNV----HSLLQK 203
P+ P KGLY+YG VG+GKTMLMD+F++ + ++R HFH+ ML + H +K
Sbjct: 184 PTAPPAPKGLYIYGNVGSGKTMLMDMFYSATEGIVKHRRRYHFHEAMLRINEHMHKTWKK 243
Query: 204 HM-------GLSD-----PLEVVAEE--------------------ISDE---------- 221
M G+S P + A+E ++D+
Sbjct: 244 QMEEKPLQSGISSWIMNLPFDTKAKEWLAAEERYKKEVQMKHILPDVADKFFLDREGEEK 303
Query: 222 -AILLCLDEFMVTDVADALLLNRLFKHLFSKGAILVATSNRVPDNLYEGGLQRDLFLPFI 280
A +LC DE DV + L+ + L S G I+VATSNR P +L E + + F +
Sbjct: 304 GANILCFDEIQTVDVFAIVALSGILSRLLSSGTIIVATSNRAPKDLNEANMVPEFFQNLL 363
Query: 281 ATLKERCVVHEIGSSIDYRKMTSGEQG-----FYLVGSGLSDFLKKRFQDLIGE--GTPT 333
+ L+E C +GS IDYR+ + + + + +K++QD G G
Sbjct: 364 SNLEEHCEKVLVGSEIDYRRFIAQRSENRVNYLWPIERETINKFEKKWQDATGRFGGKVI 423
Query: 334 PQVVEVVMGRTLHVPLGANGCAYFPFEELCDKPLGAADYFGLFKNFHTLALDGIPVFGVS 393
+ V+ GRTL VP G A F F+ LC +PLGAADY + +N+HT+ + IP+ +
Sbjct: 424 SNTISVMFGRTLEVPESCEGVARFTFDYLCGRPLGAADYIAVAENYHTVFISDIPMMSMR 483
Query: 394 NKSAAHRFVTLIDVMYENRARLLCTADGSPQDLF----EKVVTVSEAKQMAPRTSSRSRK 449
+ A RF+TLID +Y + + L C A S +LF E + E+ Q +
Sbjct: 484 IRDKARRFITLIDELYNHHSCLCCLASSSIDELFQGTEEGTLFDLESFQFETEAEGSKLR 543
Query: 450 NDVI---------------DLCVDNELGFAKDRTISRLTELNSKEYLE 482
DV+ + E F R +SRL E+ ++ YL+
Sbjct: 544 RDVLAEGNVGSGGTPVGITSILSGQEELFTFQRAVSRLIEMQTQLYLD 591
>Medtr1g012370.3 | AFG1-family ATPase | HC | chr1:2443929-2434182 |
20130731
Length = 621
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 122/408 (29%), Positives = 187/408 (45%), Gaps = 75/408 (18%)
Query: 150 PSHSPV-KGLYLYGGVGTGKTMLMDLFFNQLPSNWR-KKRIHFHDFMLNV----HSLLQK 203
P+ P KGLY+YG VG+GKTMLMD+F++ + ++R HFH+ ML + H +K
Sbjct: 184 PTAPPAPKGLYIYGNVGSGKTMLMDMFYSATEGIVKHRRRYHFHEAMLRINEHMHKTWKK 243
Query: 204 HM-------GLSD-----PLEVVAEE--------------------ISDE---------- 221
M G+S P + A+E ++D+
Sbjct: 244 QMEEKPLQSGISSWIMNLPFDTKAKEWLAAEERYKKEVQMKHILPDVADKFFLDREGEEK 303
Query: 222 -AILLCLDEFMVTDVADALLLNRLFKHLFSKGAILVATSNRVPDNLYEGGLQRDLFLPFI 280
A +LC DE DV + L+ + L S G I+VATSNR P +L E + + F +
Sbjct: 304 GANILCFDEIQTVDVFAIVALSGILSRLLSSGTIIVATSNRAPKDLNEANMVPEFFQNLL 363
Query: 281 ATLKERCVVHEIGSSIDYRKMTSGEQG-----FYLVGSGLSDFLKKRFQDLIGE--GTPT 333
+ L+E C +GS IDYR+ + + + + +K++QD G G
Sbjct: 364 SNLEEHCEKVLVGSEIDYRRFIAQRSENRVNYLWPIERETINKFEKKWQDATGRFGGKVI 423
Query: 334 PQVVEVVMGRTLHVPLGANGCAYFPFEELCDKPLGAADYFGLFKNFHTLALDGIPVFGVS 393
+ V+ GRTL VP G A F F+ LC +PLGAADY + +N+HT+ + IP+ +
Sbjct: 424 SNTISVMFGRTLEVPESCEGVARFTFDYLCGRPLGAADYIAVAENYHTVFISDIPMMSMR 483
Query: 394 NKSAAHRFVTLIDVMYENRARLLCTADGSPQDLF----EKVVTVSEAKQMAPRTSSRSRK 449
+ A RF+TLID +Y + + L C A S +LF E + E+ Q +
Sbjct: 484 IRDKARRFITLIDELYNHHSCLCCLASSSIDELFQGTEEGTLFDLESFQFETEAEGSKLR 543
Query: 450 NDVI---------------DLCVDNELGFAKDRTISRLTELNSKEYLE 482
DV+ + E F R +SRL E+ ++ YL+
Sbjct: 544 RDVLAEGNVGSGGTPVGITSILSGQEELFTFQRAVSRLIEMQTQLYLD 591