Miyakogusa Predicted Gene

Lj4g3v2018300.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2018300.1 NODE_12039_length_1727_cov_60.621307.path2.1
         (162 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g129950.2 | AFG1-family ATPase | HC | chr4:54196842-541918...   298   2e-81
Medtr1g012370.2 | AFG1-family ATPase | HC | chr1:2443925-2434182...    86   1e-17
Medtr1g012370.4 | AFG1-family ATPase | HC | chr1:2443925-2434441...    86   1e-17
Medtr1g012370.1 | AFG1-family ATPase | HC | chr1:2443929-2434267...    86   1e-17
Medtr1g012370.3 | AFG1-family ATPase | HC | chr1:2443929-2434182...    86   1e-17
Medtr4g129950.1 | AFG1-family ATPase | HC | chr4:54196842-541918...    84   5e-17
Medtr4g129950.3 | AFG1-family ATPase | HC | chr4:54196842-541917...    84   5e-17

>Medtr4g129950.2 | AFG1-family ATPase | HC | chr4:54196842-54191819
           | 20130731
          Length = 500

 Score =  298 bits (762), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 140/162 (86%), Positives = 153/162 (94%), Gaps = 2/162 (1%)

Query: 1   MGRTLHVPLGANGCAYFPFEELCDKPLGAADYFGLFKNFHTLALDGIPVFGVSNKSAAHR 60
           MGR LHVPLGANGCAYFPFEELCDKPLGAADYFGLFK FHTLALDGIP+FG+SNK+AAHR
Sbjct: 341 MGRKLHVPLGANGCAYFPFEELCDKPLGAADYFGLFKKFHTLALDGIPIFGLSNKAAAHR 400

Query: 61  FVTLIDVMYENRARLLCTADGSPQDLFEKVVTVSEAKQMAPRTSSRSRKNDVIDLCVDNE 120
           FVTL+DV+YEN+ARLLC+ADGSP DLF+K+VT+SEAKQ APRTSSRSRKND  DLCVDNE
Sbjct: 401 FVTLVDVIYENKARLLCSADGSPLDLFQKIVTISEAKQRAPRTSSRSRKNDEADLCVDNE 460

Query: 121 LGFAKDRTISRLTELNSKEYLEHHAATLAEKKERVDQNVLEA 162
           LGFAKDRTISRLTE+NS+EYLEHHA  LAEKKER DQNV+EA
Sbjct: 461 LGFAKDRTISRLTEINSREYLEHHA--LAEKKEREDQNVVEA 500


>Medtr1g012370.2 | AFG1-family ATPase | HC | chr1:2443925-2434182 |
           20130731
          Length = 497

 Score = 86.3 bits (212), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 52/160 (32%), Positives = 77/160 (48%), Gaps = 19/160 (11%)

Query: 2   GRTLHVPLGANGCAYFPFEELCDKPLGAADYFGLFKNFHTLALDGIPVFGVSNKSAAHRF 61
           GRTL VP    G A F F+ LC +PLGAADY  + +N+HT+ +  IP+  +  +  A RF
Sbjct: 308 GRTLEVPESCEGVARFTFDYLCGRPLGAADYIAVAENYHTVFISDIPMMSMRIRDKARRF 367

Query: 62  VTLIDVMYENRARLLCTADGSPQDLF----EKVVTVSEAKQMAPRTSSRSRKNDVI---- 113
           +TLID +Y + + L C A  S  +LF    E  +   E+ Q          + DV+    
Sbjct: 368 ITLIDELYNHHSCLCCLASSSIDELFQGTEEGTLFDLESFQFETEAEGSKLRRDVLAEGN 427

Query: 114 -----------DLCVDNELGFAKDRTISRLTELNSKEYLE 142
                       +    E  F   R +SRL E+ ++ YL+
Sbjct: 428 VGSGGTPVGITSILSGQEELFTFQRAVSRLIEMQTQLYLD 467


>Medtr1g012370.4 | AFG1-family ATPase | HC | chr1:2443925-2434441 |
           20130731
          Length = 520

 Score = 86.3 bits (212), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 52/160 (32%), Positives = 77/160 (48%), Gaps = 19/160 (11%)

Query: 2   GRTLHVPLGANGCAYFPFEELCDKPLGAADYFGLFKNFHTLALDGIPVFGVSNKSAAHRF 61
           GRTL VP    G A F F+ LC +PLGAADY  + +N+HT+ +  IP+  +  +  A RF
Sbjct: 331 GRTLEVPESCEGVARFTFDYLCGRPLGAADYIAVAENYHTVFISDIPMMSMRIRDKARRF 390

Query: 62  VTLIDVMYENRARLLCTADGSPQDLF----EKVVTVSEAKQMAPRTSSRSRKNDVI---- 113
           +TLID +Y + + L C A  S  +LF    E  +   E+ Q          + DV+    
Sbjct: 391 ITLIDELYNHHSCLCCLASSSIDELFQGTEEGTLFDLESFQFETEAEGSKLRRDVLAEGN 450

Query: 114 -----------DLCVDNELGFAKDRTISRLTELNSKEYLE 142
                       +    E  F   R +SRL E+ ++ YL+
Sbjct: 451 VGSGGTPVGITSILSGQEELFTFQRAVSRLIEMQTQLYLD 490


>Medtr1g012370.1 | AFG1-family ATPase | HC | chr1:2443929-2434267 |
           20130731
          Length = 621

 Score = 85.9 bits (211), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 52/160 (32%), Positives = 77/160 (48%), Gaps = 19/160 (11%)

Query: 2   GRTLHVPLGANGCAYFPFEELCDKPLGAADYFGLFKNFHTLALDGIPVFGVSNKSAAHRF 61
           GRTL VP    G A F F+ LC +PLGAADY  + +N+HT+ +  IP+  +  +  A RF
Sbjct: 432 GRTLEVPESCEGVARFTFDYLCGRPLGAADYIAVAENYHTVFISDIPMMSMRIRDKARRF 491

Query: 62  VTLIDVMYENRARLLCTADGSPQDLF----EKVVTVSEAKQMAPRTSSRSRKNDVI---- 113
           +TLID +Y + + L C A  S  +LF    E  +   E+ Q          + DV+    
Sbjct: 492 ITLIDELYNHHSCLCCLASSSIDELFQGTEEGTLFDLESFQFETEAEGSKLRRDVLAEGN 551

Query: 114 -----------DLCVDNELGFAKDRTISRLTELNSKEYLE 142
                       +    E  F   R +SRL E+ ++ YL+
Sbjct: 552 VGSGGTPVGITSILSGQEELFTFQRAVSRLIEMQTQLYLD 591


>Medtr1g012370.3 | AFG1-family ATPase | HC | chr1:2443929-2434182 |
           20130731
          Length = 621

 Score = 85.9 bits (211), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 52/160 (32%), Positives = 77/160 (48%), Gaps = 19/160 (11%)

Query: 2   GRTLHVPLGANGCAYFPFEELCDKPLGAADYFGLFKNFHTLALDGIPVFGVSNKSAAHRF 61
           GRTL VP    G A F F+ LC +PLGAADY  + +N+HT+ +  IP+  +  +  A RF
Sbjct: 432 GRTLEVPESCEGVARFTFDYLCGRPLGAADYIAVAENYHTVFISDIPMMSMRIRDKARRF 491

Query: 62  VTLIDVMYENRARLLCTADGSPQDLF----EKVVTVSEAKQMAPRTSSRSRKNDVI---- 113
           +TLID +Y + + L C A  S  +LF    E  +   E+ Q          + DV+    
Sbjct: 492 ITLIDELYNHHSCLCCLASSSIDELFQGTEEGTLFDLESFQFETEAEGSKLRRDVLAEGN 551

Query: 114 -----------DLCVDNELGFAKDRTISRLTELNSKEYLE 142
                       +    E  F   R +SRL E+ ++ YL+
Sbjct: 552 VGSGGTPVGITSILSGQEELFTFQRAVSRLIEMQTQLYLD 591


>Medtr4g129950.1 | AFG1-family ATPase | HC | chr4:54196842-54191869
           | 20130731
          Length = 400

 Score = 84.3 bits (207), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 35/41 (85%), Positives = 36/41 (87%)

Query: 1   MGRTLHVPLGANGCAYFPFEELCDKPLGAADYFGLFKNFHT 41
           MGR LHVPLGANGCAYFPFEELCDKPLGAADYFGLF   + 
Sbjct: 341 MGRKLHVPLGANGCAYFPFEELCDKPLGAADYFGLFSKLYV 381


>Medtr4g129950.3 | AFG1-family ATPase | HC | chr4:54196842-54191756
           | 20130731
          Length = 400

 Score = 84.3 bits (207), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 35/41 (85%), Positives = 36/41 (87%)

Query: 1   MGRTLHVPLGANGCAYFPFEELCDKPLGAADYFGLFKNFHT 41
           MGR LHVPLGANGCAYFPFEELCDKPLGAADYFGLF   + 
Sbjct: 341 MGRKLHVPLGANGCAYFPFEELCDKPLGAADYFGLFSKLYV 381