Miyakogusa Predicted Gene

Lj4g3v2016180.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2016180.1 tr|F2CS60|F2CS60_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2 SV=1,45.28,2e-19,seg,NULL; no
description,NULL; GLUTAMINE AMIDOTRANSFERASE CLASS-I FAMILY
PROTEIN,NULL; GMP SYNTHASE-,CUFF.50099.1
         (124 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g009720.2 | class I glutamine amidotransferase | HC | chr2...    92   9e-20
Medtr2g009720.1 | class I glutamine amidotransferase | HC | chr2...    92   1e-19
Medtr5g083210.1 | class I glutamine amidotransferase | HC | chr5...    90   6e-19
Medtr4g093250.1 | class I glutamine amidotransferase | HC | chr4...    86   7e-18

>Medtr2g009720.2 | class I glutamine amidotransferase | HC |
           chr2:2055672-2051737 | 20130731
          Length = 251

 Score = 92.4 bits (228), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 43/100 (43%), Positives = 62/100 (62%)

Query: 8   RRYALLQAAKDSDXXXXXXXXXXXXXXEAFGEVGERWDLFRVCEEEFPDFNELHKYDGFV 67
           +RYA+L   +DS+              +   E GE WDL++V  +EFP+ +++  YDGFV
Sbjct: 8   KRYAILMCGEDSEYLLKRHGGCYGFFTKMLAEEGETWDLYKVVNQEFPEDDDVDFYDGFV 67

Query: 68  ITGSSNDAFGNDYWILKLCFMLQILDAMEKKVLGICFGHQ 107
           ITGS  DA  ND WI +L  ++  L+++ KK+LGICFGHQ
Sbjct: 68  ITGSCKDAHSNDPWIHQLLTLVHTLNSLNKKILGICFGHQ 107


>Medtr2g009720.1 | class I glutamine amidotransferase | HC |
           chr2:2055672-2050938 | 20130731
          Length = 245

 Score = 92.0 bits (227), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 43/100 (43%), Positives = 62/100 (62%)

Query: 8   RRYALLQAAKDSDXXXXXXXXXXXXXXEAFGEVGERWDLFRVCEEEFPDFNELHKYDGFV 67
           +RYA+L   +DS+              +   E GE WDL++V  +EFP+ +++  YDGFV
Sbjct: 8   KRYAILMCGEDSEYLLKRHGGCYGFFTKMLAEEGETWDLYKVVNQEFPEDDDVDFYDGFV 67

Query: 68  ITGSSNDAFGNDYWILKLCFMLQILDAMEKKVLGICFGHQ 107
           ITGS  DA  ND WI +L  ++  L+++ KK+LGICFGHQ
Sbjct: 68  ITGSCKDAHSNDPWIHQLLTLVHTLNSLNKKILGICFGHQ 107


>Medtr5g083210.1 | class I glutamine amidotransferase | HC |
           chr5:35905124-35901997 | 20130731
          Length = 245

 Score = 89.7 bits (221), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 42/105 (40%), Positives = 64/105 (60%)

Query: 8   RRYALLQAAKDSDXXXXXXXXXXXXXXEAFGEVGERWDLFRVCEEEFPDFNELHKYDGFV 67
           +R+ +L  A+DS+              +   E  E WD+++V   EFP  +EL  YDGFV
Sbjct: 7   KRFGVLLCAEDSEYVIKMHGGYSGVFLKMLEEENETWDMYKVSCGEFPKDDELSLYDGFV 66

Query: 68  ITGSSNDAFGNDYWILKLCFMLQILDAMEKKVLGICFGHQAHFQA 112
           ITGS NDA+GN+ WI  L  +++ L++M+ K++G+CFGHQ   +A
Sbjct: 67  ITGSCNDAYGNEKWICDLVTLIKKLNSMQTKIIGVCFGHQVLGRA 111


>Medtr4g093250.1 | class I glutamine amidotransferase | HC |
           chr4:37022848-37025103 | 20130731
          Length = 264

 Score = 86.3 bits (212), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 46/105 (43%), Positives = 63/105 (60%)

Query: 3   INSEGRRYALLQAAKDSDXXXXXXXXXXXXXXEAFGEVGERWDLFRVCEEEFPDFNELHK 62
           +   G+R+ +L  A DS+                  E GE WD+++V   EFPD  +L+ 
Sbjct: 4   MGGSGKRFGVLLCADDSEYVKKMYGGYFGVFVRMLEEEGESWDVYKVARGEFPDDEDLNL 63

Query: 63  YDGFVITGSSNDAFGNDYWILKLCFMLQILDAMEKKVLGICFGHQ 107
           YDGFVITGS +DA GND W+ +L  +L+ L+ M KK+LGICFGHQ
Sbjct: 64  YDGFVITGSCSDAHGNDTWVSQLLNLLKKLNDMNKKILGICFGHQ 108