Miyakogusa Predicted Gene

Lj4g3v2000920.5
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2000920.5 Non Characterized Hit- tr|I1Q7K5|I1Q7K5_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=4
SV=1,34.87,2e-19,DUF566,Protein of unknown function DUF566; FAMILY NOT
NAMED,NULL; seg,NULL,CUFF.50076.5
         (153 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g130490.3 | DUF566 family protein | HC | chr4:54368906-543...   223   5e-59
Medtr4g130490.2 | DUF566 family protein | HC | chr4:54367429-543...   223   5e-59
Medtr4g130490.4 | DUF566 family protein | HC | chr4:54367429-543...   194   2e-50
Medtr1g018440.1 | DUF566 family protein | HC | chr1:5313894-5309...   134   4e-32
Medtr1g106735.1 | DUF566 family protein | HC | chr1:48288188-482...   128   2e-30
Medtr1g106735.2 | DUF566 family protein | HC | chr1:48287900-482...   124   4e-29
Medtr4g130490.1 | DUF566 family protein | HC | chr4:54367443-543...    92   2e-19
Medtr2g028220.1 | DUF566 family protein | HC | chr2:10398831-103...    82   2e-16
Medtr2g090050.1 | DUF566 family protein | HC | chr2:38123748-381...    62   2e-10

>Medtr4g130490.3 | DUF566 family protein | HC |
           chr4:54368906-54375521 | 20130731
          Length = 617

 Score =  223 bits (568), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 111/153 (72%), Positives = 122/153 (79%)

Query: 1   MRESIIRKRINXXXXXXXXXXXSILNDQMTYLDDWAVIETDHVDALSGAIEDLEASTLRL 60
           M ESI RKRI            SILNDQM YLDDWA +E++HVDALSGA+EDLEA+TLRL
Sbjct: 464 MWESITRKRIYLQQLQLELKLNSILNDQMAYLDDWAALESNHVDALSGAVEDLEANTLRL 523

Query: 61  PLTGGAKADSEHLKAAICSAVDVMQATGSAIYPFLSRVKDMNNLVSEVAVVSAHEKAMLE 120
           PLTGGAKAD E LK AICSAVDVMQA GSAI P  SRV+ MNNL+SEVA+VSA EKAML+
Sbjct: 524 PLTGGAKADIEPLKVAICSAVDVMQAMGSAIRPLFSRVEGMNNLISEVAIVSAQEKAMLD 583

Query: 121 ECEAQLTVATAMQVEESSLRTHLMQTKQALENK 153
           ECEA L  +T+MQVEE SLRTHLMQ KQALE K
Sbjct: 584 ECEALLAFSTSMQVEEYSLRTHLMQFKQALEVK 616


>Medtr4g130490.2 | DUF566 family protein | HC |
           chr4:54367429-54375521 | 20130731
          Length = 617

 Score =  223 bits (568), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 111/153 (72%), Positives = 122/153 (79%)

Query: 1   MRESIIRKRINXXXXXXXXXXXSILNDQMTYLDDWAVIETDHVDALSGAIEDLEASTLRL 60
           M ESI RKRI            SILNDQM YLDDWA +E++HVDALSGA+EDLEA+TLRL
Sbjct: 464 MWESITRKRIYLQQLQLELKLNSILNDQMAYLDDWAALESNHVDALSGAVEDLEANTLRL 523

Query: 61  PLTGGAKADSEHLKAAICSAVDVMQATGSAIYPFLSRVKDMNNLVSEVAVVSAHEKAMLE 120
           PLTGGAKAD E LK AICSAVDVMQA GSAI P  SRV+ MNNL+SEVA+VSA EKAML+
Sbjct: 524 PLTGGAKADIEPLKVAICSAVDVMQAMGSAIRPLFSRVEGMNNLISEVAIVSAQEKAMLD 583

Query: 121 ECEAQLTVATAMQVEESSLRTHLMQTKQALENK 153
           ECEA L  +T+MQVEE SLRTHLMQ KQALE K
Sbjct: 584 ECEALLAFSTSMQVEEYSLRTHLMQFKQALEVK 616


>Medtr4g130490.4 | DUF566 family protein | HC |
           chr4:54367429-54372849 | 20130731
          Length = 624

 Score =  194 bits (494), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 95/135 (70%), Positives = 106/135 (78%)

Query: 1   MRESIIRKRINXXXXXXXXXXXSILNDQMTYLDDWAVIETDHVDALSGAIEDLEASTLRL 60
           M ESI RKRI            SILNDQM YLDDWA +E++HVDALSGA+EDLEA+TLRL
Sbjct: 464 MWESITRKRIYLQQLQLELKLNSILNDQMAYLDDWAALESNHVDALSGAVEDLEANTLRL 523

Query: 61  PLTGGAKADSEHLKAAICSAVDVMQATGSAIYPFLSRVKDMNNLVSEVAVVSAHEKAMLE 120
           PLTGGAKAD E LK AICSAVDVMQA GSAI P  SRV+ MNNL+SEVA+VSA EKAML+
Sbjct: 524 PLTGGAKADIEPLKVAICSAVDVMQAMGSAIRPLFSRVEGMNNLISEVAIVSAQEKAMLD 583

Query: 121 ECEAQLTVATAMQVE 135
           ECEA L  +T+MQV 
Sbjct: 584 ECEALLAFSTSMQVR 598


>Medtr1g018440.1 | DUF566 family protein | HC | chr1:5313894-5309252
           | 20130731
          Length = 621

 Score =  134 bits (336), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 72/147 (48%), Positives = 100/147 (68%)

Query: 1   MRESIIRKRINXXXXXXXXXXXSILNDQMTYLDDWAVIETDHVDALSGAIEDLEASTLRL 60
           +RES++ KRI            SILN+QM YL+DWA+++  +  +LSGA E L+ASTLRL
Sbjct: 468 LRESVVAKRIMLQLLKQHLKLISILNEQMIYLEDWAILDRVYSGSLSGATEALKASTLRL 527

Query: 61  PLTGGAKADSEHLKAAICSAVDVMQATGSAIYPFLSRVKDMNNLVSEVAVVSAHEKAMLE 120
           P+ GGAK D  +LK AICSA+DVMQA  S+I   L +V ++ +LV EV  +SA E+ +L+
Sbjct: 528 PVFGGAKIDLLNLKEAICSAMDVMQAMASSICLLLPKVVNVKSLVVEVVNISAKERCLLD 587

Query: 121 ECEAQLTVATAMQVEESSLRTHLMQTK 147
           EC+  L++   MQV ESSL +H +Q K
Sbjct: 588 ECQDLLSIIRTMQVRESSLISHSIQMK 614


>Medtr1g106735.1 | DUF566 family protein | HC |
           chr1:48288188-48281202 | 20130731
          Length = 616

 Score =  128 bits (322), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 67/149 (44%), Positives = 99/149 (66%)

Query: 1   MRESIIRKRINXXXXXXXXXXXSILNDQMTYLDDWAVIETDHVDALSGAIEDLEASTLRL 60
           +R S+I KRI            SIL  Q++YL++WA+++ DH  ++ GA E L ASTLRL
Sbjct: 465 LRHSVILKRIKLVLLRQKLKLTSILKGQISYLEEWALLDRDHSSSVLGATEALRASTLRL 524

Query: 61  PLTGGAKADSEHLKAAICSAVDVMQATGSAIYPFLSRVKDMNNLVSEVAVVSAHEKAMLE 120
           PL   A AD  +LK A+ SAVDVMQA  S+IY   S+V++ N LV+E+  V++ E+ +L+
Sbjct: 525 PLVEKATADVPNLKDALGSAVDVMQAMASSIYSLSSKVEETNCLVAEILKVTSKERFLLQ 584

Query: 121 ECEAQLTVATAMQVEESSLRTHLMQTKQA 149
           +C+  L+   AMQV++ SLRTH++Q  +A
Sbjct: 585 QCKDFLSSLAAMQVKDCSLRTHMLQLSRA 613


>Medtr1g106735.2 | DUF566 family protein | HC |
           chr1:48287900-48281263 | 20130731
          Length = 617

 Score =  124 bits (310), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 67/150 (44%), Positives = 99/150 (66%), Gaps = 1/150 (0%)

Query: 1   MRESIIRKRINXXXXXXXXXXXSILNDQMTYLDDWAVIETDHVDALSGAIEDLEASTLRL 60
           +R S+I KRI            SIL  Q++YL++WA+++ DH  ++ GA E L ASTLRL
Sbjct: 465 LRHSVILKRIKLVLLRQKLKLTSILKGQISYLEEWALLDRDHSSSVLGATEALRASTLRL 524

Query: 61  PLTGGAKADSEHLKAAICSAVDVMQATGSAIYPFLSR-VKDMNNLVSEVAVVSAHEKAML 119
           PL   A AD  +LK A+ SAVDVMQA  S+IY   S+ V++ N LV+E+  V++ E+ +L
Sbjct: 525 PLVEKATADVPNLKDALGSAVDVMQAMASSIYSLSSKQVEETNCLVAEILKVTSKERFLL 584

Query: 120 EECEAQLTVATAMQVEESSLRTHLMQTKQA 149
           ++C+  L+   AMQV++ SLRTH++Q  +A
Sbjct: 585 QQCKDFLSSLAAMQVKDCSLRTHMLQLSRA 614


>Medtr4g130490.1 | DUF566 family protein | HC |
           chr4:54367443-54375516 | 20130731
          Length = 534

 Score = 92.0 bits (227), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 46/67 (68%), Positives = 51/67 (76%)

Query: 1   MRESIIRKRINXXXXXXXXXXXSILNDQMTYLDDWAVIETDHVDALSGAIEDLEASTLRL 60
           M ESI RKRI            SILNDQM YLDDWA +E++HVDALSGA+EDLEA+TLRL
Sbjct: 464 MWESITRKRIYLQQLQLELKLNSILNDQMAYLDDWAALESNHVDALSGAVEDLEANTLRL 523

Query: 61  PLTGGAK 67
           PLTGGAK
Sbjct: 524 PLTGGAK 530


>Medtr2g028220.1 | DUF566 family protein | HC |
           chr2:10398831-10394602 | 20130731
          Length = 495

 Score = 81.6 bits (200), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 80/145 (55%)

Query: 1   MRESIIRKRINXXXXXXXXXXXSILNDQMTYLDDWAVIETDHVDALSGAIEDLEASTLRL 60
           MR+S+ RKR+             +L  Q+ YLD+W+ +E D+  +++ AI+ L  +++RL
Sbjct: 335 MRDSVHRKRLELELLRRSKTLSIVLEAQIPYLDEWSAMEEDYSVSINEAIQALLNASVRL 394

Query: 61  PLTGGAKADSEHLKAAICSAVDVMQATGSAIYPFLSRVKDMNNLVSEVAVVSAHEKAMLE 120
           P  G  + D   +  ++ SA+ VM+   S     + + ++ +  +SE+A V   E+A++E
Sbjct: 395 PTGGNIRVDVREVGESLNSALKVMETIISNTQRLMPKAEETDTSISELARVVGGERALIE 454

Query: 121 ECEAQLTVATAMQVEESSLRTHLMQ 145
           EC   L+     QVEE SLR  L+Q
Sbjct: 455 ECGGFLSKTHKSQVEECSLRAQLIQ 479


>Medtr2g090050.1 | DUF566 family protein | HC |
           chr2:38123748-38126473 | 20130731
          Length = 501

 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 71/144 (49%)

Query: 2   RESIIRKRINXXXXXXXXXXXSILNDQMTYLDDWAVIETDHVDALSGAIEDLEASTLRLP 61
           R ++++K+I             IL  Q+  L+ W  +E  HV  ++   E L ++  R+P
Sbjct: 339 RNTVMKKKIQFAREKLEMKKAFILYYQLKLLEAWGSMERQHVSTITATKECLHSAVCRVP 398

Query: 62  LTGGAKADSEHLKAAICSAVDVMQATGSAIYPFLSRVKDMNNLVSEVAVVSAHEKAMLEE 121
           L  GAK + +    AI  A DV  +  S +  F   V     ++SE+A V   EK +LEE
Sbjct: 399 LLEGAKVNIQFTSIAIRQASDVAASIKSMLTSFSPAVDQTAAILSELAKVVTQEKQLLEE 458

Query: 122 CEAQLTVATAMQVEESSLRTHLMQ 145
               L   + ++++ESS++  L+Q
Sbjct: 459 FYDLLHNISVVELQESSVKCSLVQ 482