Miyakogusa Predicted Gene

Lj4g3v1986780.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1986780.1 Non Characterized Hit- tr|I1NAA1|I1NAA1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.40703
PE,44.54,0.000000000007, ,NODE_60376_length_598_cov_27.469900.path1.1
         (116 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g060740.1 | hypothetical protein | HC | chr3:24096375-2409...    61   3e-10

>Medtr3g060740.1 | hypothetical protein | HC |
           chr3:24096375-24095455 | 20130731
          Length = 124

 Score = 60.8 bits (146), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 37/94 (39%), Positives = 55/94 (58%), Gaps = 9/94 (9%)

Query: 9   FFLFNIVIYSAYGSTRTAETREFMTSKQQKETKLMYGMVMEPSKP--GTQ------HVAQ 60
           F L +I+ + A+  T T +   F TSKQQ+E K MYGM++E +KP   TQ      HV Q
Sbjct: 10  FLLISILNFLAHEITATQQVEGFSTSKQQREPKYMYGMILESNKPTSSTQKTNLGLHVVQ 69

Query: 61  QTKISPLAKGLYRGPSNIK-PSNVRGRSNSYSIK 93
             K+S  A+ +Y G +N+K P   +  +++ SIK
Sbjct: 70  HAKVSKRARTVYGGANNVKSPHKGKNSASTNSIK 103