Miyakogusa Predicted Gene

Lj4g3v1983680.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1983680.1 Non Characterized Hit- tr|B9STT6|B9STT6_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,31.48,3e-16,seg,NULL; C2H2 and C2HC zinc fingers,NULL; U1-like zinc
finger,Zinc finger, U1-type; zinc finger,Zin,CUFF.50060.1
         (669 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g130690.1 | C2H2 type zf-met: zinc-finger protein | LC | c...   123   5e-28
Medtr3g045840.1 | C2H2 type zf-met: zinc-finger protein | LC | c...    79   1e-14
Medtr4g129690.1 | C2H2 type zf-met: zinc-finger protein | LC | c...    65   2e-10
Medtr4g093260.3 | TB2/DP1, HVA22 family protein | LC | chr4:3698...    59   2e-08
Medtr4g093260.2 | TB2/DP1, HVA22 family protein | LC | chr4:3698...    56   9e-08
Medtr4g093260.1 | TB2/DP1, HVA22 family protein | LC | chr4:3698...    56   1e-07
Medtr4g093510.1 | TB2/DP1, HVA22 family protein | LC | chr4:3698...    53   1e-06

>Medtr4g130690.1 | C2H2 type zf-met: zinc-finger protein | LC |
           chr4:54456352-54460500 | 20130731
          Length = 486

 Score =  123 bits (309), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 109/341 (31%), Positives = 156/341 (45%), Gaps = 56/341 (16%)

Query: 330 MTQQNNLNEVIVQAKPDTDLYDAKRKA---EAPAVNDSQFGLIKKPKE-WGCMLCGVTAP 385
             Q ++ ++VI+ AKPD DLY AKRKA   +AP  +    G+ KKPKE W C LC + A 
Sbjct: 137 FPQTSDKDKVILLAKPDPDLYGAKRKALTLDAPNDDPYAIGMKKKPKEEWSCELCQIKAT 196

Query: 386 DENSLNLHLNGKKHKTKEAALEAEKIVMXXXXXXXXXXXXXXXXXIITTTSGFNAKEDIK 445
            E+ LN HLNGKKHK KEA    +K  +                 ++  T       D +
Sbjct: 197 SESGLNAHLNGKKHKAKEAG---QKRKIDKCSRKSQKTAEKITDTVVVET-------DQQ 246

Query: 446 THQA-LGGEDMTQQNVDSSAAEANKEEQVVQKSQNIGVSEINEVTTEEADKTNAFVGREM 504
             Q  L  E M +  VD    E+ KEEQ+V+   + GV++ N                  
Sbjct: 247 APQPCLALEVMDETMVDKGLTESKKEEQLVETMVDNGVTKSNNE---------------- 290

Query: 505 KFWGCKLCGVTATDASSLNAHLFGRKHKAREAALGAEKTVRSTTSSLSAMKNVKSTETII 564
                KL  + A +  S+       K++     + A+K V  +          K  E ++
Sbjct: 291 -----KLVEMMADNGVSITTS----KNEKNPVEMKADKNVTES----------KIEEQLV 331

Query: 565 NTTSGLDAKAWGGEDES---QKNVDSSAVDANKEEQVVQKSQNIGVSEI-NEVTTEEAGK 620
              +         E+E    + N D    ++  EEQ+V+KSQ IG SE  ++  T+EA K
Sbjct: 332 EMVADNGVSITTSENEKKLVEMNADKDITESKIEEQLVEKSQKIGFSECRSDAATDEAWK 391

Query: 621 TNALVGRKR--ELWCDICGISATSQLQMEDHKKGSKHRRRM 659
            +AL  R++   LWC+ C I A SQ  MEDH KG KH + M
Sbjct: 392 ESALAKRRKVGRLWCEHCQIGAFSQAVMEDHMKGKKHLKNM 432



 Score = 75.5 bits (184), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 38/73 (52%), Positives = 48/73 (65%), Gaps = 3/73 (4%)

Query: 76  KDMTQQNNLDEVIVLAKPDTDLYDAKRKA---EAPAVNDSQICLIKKPKKEWGCMLCGVT 132
           K   Q ++ D+VI+LAKPD DLY AKRKA   +AP  +   I + KKPK+EW C LC + 
Sbjct: 135 KHFPQTSDKDKVILLAKPDPDLYGAKRKALTLDAPNDDPYAIGMKKKPKEEWSCELCQIK 194

Query: 133 AFDENSLNVHLNG 145
           A  E+ LN HLNG
Sbjct: 195 ATSESGLNAHLNG 207



 Score = 69.7 bits (169), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 35/71 (49%), Positives = 45/71 (63%), Gaps = 3/71 (4%)

Query: 204 MTQQNNLDEVIVQVKPDTDLYDAKRKA---EAPAVNDSQIYLIKKPKKEWGCMLCGVTAF 260
             Q ++ D+VI+  KPD DLY AKRKA   +AP  +   I + KKPK+EW C LC + A 
Sbjct: 137 FPQTSDKDKVILLAKPDPDLYGAKRKALTLDAPNDDPYAIGMKKKPKEEWSCELCQIKAT 196

Query: 261 DENSLNVHLNG 271
            E+ LN HLNG
Sbjct: 197 SESGLNAHLNG 207



 Score = 50.4 bits (119), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 57/111 (51%), Gaps = 4/111 (3%)

Query: 455 MTQQNVDSSAAEANKEEQVVQKSQNIGVSEI-NEVTTEEADKTNAFVGREM--KFWGCKL 511
           + + N D    E+  EEQ+V+KSQ IG SE  ++  T+EA K +A   R    + W C+ 
Sbjct: 350 LVEMNADKDITESKIEEQLVEKSQKIGFSECRSDAATDEAWKESALAKRRKVGRLW-CEH 408

Query: 512 CGVTATDASSLNAHLFGRKHKAREAALGAEKTVRSTTSSLSAMKNVKSTET 562
           C + A   + +  H+ G+KH      L       ++TSS+S   ++  T+T
Sbjct: 409 CQIGAFSQAVMEDHMKGKKHLKNMKKLHQNNASPTSTSSISQKTHLLITDT 459


>Medtr3g045840.1 | C2H2 type zf-met: zinc-finger protein | LC |
           chr3:15040153-15037599 | 20130731
          Length = 543

 Score = 79.3 bits (194), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 41/76 (53%), Positives = 50/76 (65%), Gaps = 4/76 (5%)

Query: 333 QNNLNEVIVQAKPDTDLYDAKRKA---EAPAVNDSQFGLIKKPKE-WGCMLCGVTAPDEN 388
           +NN +++I+ AKPD  LY AKRKA   + P+   S  GL KK KE W C LC + A  EN
Sbjct: 93  RNNKDKIILLAKPDMSLYSAKRKAVTQDVPSDEPSAIGLNKKLKEEWSCELCRINATSEN 152

Query: 389 SLNLHLNGKKHKTKEA 404
            LN HLNGKKHK +EA
Sbjct: 153 GLNDHLNGKKHKAREA 168



 Score = 74.3 bits (181), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 37/68 (54%), Positives = 45/68 (66%), Gaps = 3/68 (4%)

Query: 81  QNNLDEVIVLAKPDTDLYDAKRKA---EAPAVNDSQICLIKKPKKEWGCMLCGVTAFDEN 137
           +NN D++I+LAKPD  LY AKRKA   + P+   S I L KK K+EW C LC + A  EN
Sbjct: 93  RNNKDKIILLAKPDMSLYSAKRKAVTQDVPSDEPSAIGLNKKLKEEWSCELCRINATSEN 152

Query: 138 SLNVHLNG 145
            LN HLNG
Sbjct: 153 GLNDHLNG 160



 Score = 69.3 bits (168), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 35/68 (51%), Positives = 43/68 (63%), Gaps = 3/68 (4%)

Query: 207 QNNLDEVIVQVKPDTDLYDAKRKA---EAPAVNDSQIYLIKKPKKEWGCMLCGVTAFDEN 263
           +NN D++I+  KPD  LY AKRKA   + P+   S I L KK K+EW C LC + A  EN
Sbjct: 93  RNNKDKIILLAKPDMSLYSAKRKAVTQDVPSDEPSAIGLNKKLKEEWSCELCRINATSEN 152

Query: 264 SLNVHLNG 271
            LN HLNG
Sbjct: 153 GLNDHLNG 160


>Medtr4g129690.1 | C2H2 type zf-met: zinc-finger protein | LC |
           chr4:54056214-54059208 | 20130731
          Length = 369

 Score = 65.5 bits (158), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/81 (49%), Positives = 48/81 (59%), Gaps = 5/81 (6%)

Query: 337 NEVIVQAKPDTDLYDAKRKAEAPAV----NDSQFGLIKK-PKEWGCMLCGVTAPDENSLN 391
           ++VI+ AKPD  L  AKRKA    +      S  G  KK  KEW C LC + A  EN LN
Sbjct: 105 DKVILLAKPDLGLDSAKRKAVTHDIVLDDEPSAIGSNKKLKKEWSCELCQIKASSENGLN 164

Query: 392 LHLNGKKHKTKEAALEAEKIV 412
            HLNGKKHK +EA  ++EK V
Sbjct: 165 DHLNGKKHKAREARQKSEKTV 185



 Score = 64.3 bits (155), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 90/203 (44%), Gaps = 60/203 (29%)

Query: 505 KFWGCKLCGVTATDASSLNAHLFGRKHKAREAALGAEKTVRSTTSSL--SAMKNV----- 557
           K W C+LC + A+  + LN HL G+KHKAREA   +EKTV++ T ++  + +  V     
Sbjct: 146 KEWSCELCQIKASSENGLNDHLNGKKHKAREARQKSEKTVKNATDAVVNTTISRVDENGV 205

Query: 558 ------------------------KSTETIINTT--------------------SGLDAK 573
                                   K+ E +I+T                     +G+   
Sbjct: 206 DAESKTEEQHVETMAGNGLNVTESKTEEKLIDTMIDKSVVESKNEEQLVEMMAENGVSVT 265

Query: 574 AWGGEDESQKNVDSSAVDANKEEQVVQKSQNIGVSE-INEVTTEEAGKTNAL-----VGR 627
               E   +  VD    ++  EEQ ++K++N+   E I    TEE G+ +AL     VG 
Sbjct: 266 ESNNEKLEEMMVDKRVTESKNEEQHMEKNENVDSFESIKGAATEEVGRKSALTETIKVGG 325

Query: 628 KRELWCDICGISATSQLQMEDHK 650
              LWC++C I  TS++ ME+HK
Sbjct: 326 ---LWCELCQIGTTSKVVMEEHK 345



 Score = 58.2 bits (139), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 34/65 (52%), Positives = 38/65 (58%), Gaps = 4/65 (6%)

Query: 85  DEVIVLAKPDTDLYDAKRKAEAPAV----NDSQICLIKKPKKEWGCMLCGVTAFDENSLN 140
           D+VI+LAKPD  L  AKRKA    +      S I   KK KKEW C LC + A  EN LN
Sbjct: 105 DKVILLAKPDLGLDSAKRKAVTHDIVLDDEPSAIGSNKKLKKEWSCELCQIKASSENGLN 164

Query: 141 VHLNG 145
            HLNG
Sbjct: 165 DHLNG 169



 Score = 53.5 bits (127), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 32/65 (49%), Positives = 36/65 (55%), Gaps = 4/65 (6%)

Query: 211 DEVIVQVKPDTDLYDAKRKAEAPAV----NDSQIYLIKKPKKEWGCMLCGVTAFDENSLN 266
           D+VI+  KPD  L  AKRKA    +      S I   KK KKEW C LC + A  EN LN
Sbjct: 105 DKVILLAKPDLGLDSAKRKAVTHDIVLDDEPSAIGSNKKLKKEWSCELCQIKASSENGLN 164

Query: 267 VHLNG 271
            HLNG
Sbjct: 165 DHLNG 169


>Medtr4g093260.3 | TB2/DP1, HVA22 family protein | LC |
           chr4:36988810-36983804 | 20130731
          Length = 553

 Score = 58.5 bits (140), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 87/330 (26%), Positives = 134/330 (40%), Gaps = 45/330 (13%)

Query: 226 AKRKAEAPAVNDSQIYLIKKPKKEWGCMLCGVTAFDENSLNVHLNGXXXXXXXXXXXXXX 285
           A+R +    V  S     K+ +KEW C LC VT   E  LN HL+G              
Sbjct: 123 AERNSAGGEVPQSSTSTQKEVQKEWTCALCLVTTTSEKILNSHLSGKKHRAALQRQKDAE 182

Query: 286 IVKSTFSLLSPTKNLKSTDTIITTTSGLNAKEDIKTHQALGGEDMTQQNNLNEVIVQAKP 345
              +   +L+  K +K  D  +        K+DI     +G          NE     + 
Sbjct: 183 T--NGERILTEHKIIKDLDA-VEKKEIHETKQDIPVIPKIGPSQ-------NESSASVET 232

Query: 346 DTDLYDAKRKAEAPAVNDSQFGLIKKPKEWGCMLCGVTAPDENSLNLHLNGKKHKTKEAA 405
              +   +   E P  +  Q  L    K+  C LC  TA  E  LN   +G+KH    AA
Sbjct: 233 KGTVEGDRAGGEVPQSSSMQMDLQ---KDRTCDLCLTTA--EEILNARFSGRKH---SAA 284

Query: 406 LEAEKIVMXXXXXXXXXXXXXXXXXIITTTSGFNAK---EDIKTHQALGGEDM--TQQNV 460
           L+ +K                    I+  T+G   +   +DIK  +A+  +++  T+Q++
Sbjct: 285 LQKQK-----DAEAINEITTTDNKEILKGTNGDRLQTEHKDIKDLEAIEEKEIPATKQDI 339

Query: 461 ------DSSAAEANKEEQVVQKSQNIGVSEINEVTTEEADKTNAFVGREM-KFWGCKLCG 513
                  S      + + + Q+S  +GV         E  +++    +E+ K W C LC 
Sbjct: 340 LMPKIWPSQMHRQPQWKPMEQQSDTVGV---------EVPQSSTIAQKEVQKEWACALCL 390

Query: 514 VTATDASSLNAHLFGRKHKAR-EAALGAEK 542
           VT     +LN+HL GRKH+A  EAAL A+K
Sbjct: 391 VTVPCEKTLNSHLNGRKHRAACEAALKAKK 420



 Score = 52.8 bits (125), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 24/40 (60%), Positives = 30/40 (75%), Gaps = 1/40 (2%)

Query: 373 KEWGCMLCGVTAPDENSLNLHLNGKKHKTK-EAALEAEKI 411
           KEW C LC VT P E +LN HLNG+KH+   EAAL+A+K+
Sbjct: 382 KEWACALCLVTVPCEKTLNSHLNGRKHRAACEAALKAKKL 421


>Medtr4g093260.2 | TB2/DP1, HVA22 family protein | LC |
           chr4:36989505-36983804 | 20130731
          Length = 646

 Score = 56.2 bits (134), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 87/330 (26%), Positives = 134/330 (40%), Gaps = 45/330 (13%)

Query: 226 AKRKAEAPAVNDSQIYLIKKPKKEWGCMLCGVTAFDENSLNVHLNGXXXXXXXXXXXXXX 285
           A+R +    V  S     K+ +KEW C LC VT   E  LN HL+G              
Sbjct: 216 AERNSAGGEVPQSSTSTQKEVQKEWTCALCLVTTTSEKILNSHLSGKKHRAALQRQKDAE 275

Query: 286 IVKSTFSLLSPTKNLKSTDTIITTTSGLNAKEDIKTHQALGGEDMTQQNNLNEVIVQAKP 345
              +   +L+  K +K  D  +        K+DI     +G          NE     + 
Sbjct: 276 T--NGERILTEHKIIKDLDA-VEKKEIHETKQDIPVIPKIGPSQ-------NESSASVET 325

Query: 346 DTDLYDAKRKAEAPAVNDSQFGLIKKPKEWGCMLCGVTAPDENSLNLHLNGKKHKTKEAA 405
              +   +   E P  +  Q  L    K+  C LC  TA  E  LN   +G+KH    AA
Sbjct: 326 KGTVEGDRAGGEVPQSSSMQMDLQ---KDRTCDLCLTTA--EEILNARFSGRKH---SAA 377

Query: 406 LEAEKIVMXXXXXXXXXXXXXXXXXIITTTSGFNAK---EDIKTHQALGGEDM--TQQNV 460
           L+ +K                    I+  T+G   +   +DIK  +A+  +++  T+Q++
Sbjct: 378 LQKQK-----DAEAINEITTTDNKEILKGTNGDRLQTEHKDIKDLEAIEEKEIPATKQDI 432

Query: 461 ------DSSAAEANKEEQVVQKSQNIGVSEINEVTTEEADKTNAFVGREM-KFWGCKLCG 513
                  S      + + + Q+S  +GV         E  +++    +E+ K W C LC 
Sbjct: 433 LMPKIWPSQMHRQPQWKPMEQQSDTVGV---------EVPQSSTIAQKEVQKEWACALCL 483

Query: 514 VTATDASSLNAHLFGRKHKAR-EAALGAEK 542
           VT     +LN+HL GRKH+A  EAAL A+K
Sbjct: 484 VTVPCEKTLNSHLNGRKHRAACEAALKAKK 513



 Score = 52.8 bits (125), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 24/40 (60%), Positives = 30/40 (75%), Gaps = 1/40 (2%)

Query: 373 KEWGCMLCGVTAPDENSLNLHLNGKKHKTK-EAALEAEKI 411
           KEW C LC VT P E +LN HLNG+KH+   EAAL+A+K+
Sbjct: 475 KEWACALCLVTVPCEKTLNSHLNGRKHRAACEAALKAKKL 514


>Medtr4g093260.1 | TB2/DP1, HVA22 family protein | LC |
           chr4:36989578-36983804 | 20130731
          Length = 655

 Score = 56.2 bits (134), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 87/330 (26%), Positives = 134/330 (40%), Gaps = 45/330 (13%)

Query: 226 AKRKAEAPAVNDSQIYLIKKPKKEWGCMLCGVTAFDENSLNVHLNGXXXXXXXXXXXXXX 285
           A+R +    V  S     K+ +KEW C LC VT   E  LN HL+G              
Sbjct: 225 AERNSAGGEVPQSSTSTQKEVQKEWTCALCLVTTTSEKILNSHLSGKKHRAALQRQKDAE 284

Query: 286 IVKSTFSLLSPTKNLKSTDTIITTTSGLNAKEDIKTHQALGGEDMTQQNNLNEVIVQAKP 345
              +   +L+  K +K  D  +        K+DI     +G          NE     + 
Sbjct: 285 T--NGERILTEHKIIKDLDA-VEKKEIHETKQDIPVIPKIGPSQ-------NESSASVET 334

Query: 346 DTDLYDAKRKAEAPAVNDSQFGLIKKPKEWGCMLCGVTAPDENSLNLHLNGKKHKTKEAA 405
              +   +   E P  +  Q  L    K+  C LC  TA  E  LN   +G+KH    AA
Sbjct: 335 KGTVEGDRAGGEVPQSSSMQMDLQ---KDRTCDLCLTTA--EEILNARFSGRKH---SAA 386

Query: 406 LEAEKIVMXXXXXXXXXXXXXXXXXIITTTSGFNAK---EDIKTHQALGGEDM--TQQNV 460
           L+ +K                    I+  T+G   +   +DIK  +A+  +++  T+Q++
Sbjct: 387 LQKQK-----DAEAINEITTTDNKEILKGTNGDRLQTEHKDIKDLEAIEEKEIPATKQDI 441

Query: 461 ------DSSAAEANKEEQVVQKSQNIGVSEINEVTTEEADKTNAFVGREM-KFWGCKLCG 513
                  S      + + + Q+S  +GV         E  +++    +E+ K W C LC 
Sbjct: 442 LMPKIWPSQMHRQPQWKPMEQQSDTVGV---------EVPQSSTIAQKEVQKEWACALCL 492

Query: 514 VTATDASSLNAHLFGRKHKAR-EAALGAEK 542
           VT     +LN+HL GRKH+A  EAAL A+K
Sbjct: 493 VTVPCEKTLNSHLNGRKHRAACEAALKAKK 522



 Score = 52.8 bits (125), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 24/40 (60%), Positives = 30/40 (75%), Gaps = 1/40 (2%)

Query: 373 KEWGCMLCGVTAPDENSLNLHLNGKKHKTK-EAALEAEKI 411
           KEW C LC VT P E +LN HLNG+KH+   EAAL+A+K+
Sbjct: 484 KEWACALCLVTVPCEKTLNSHLNGRKHRAACEAALKAKKL 523


>Medtr4g093510.1 | TB2/DP1, HVA22 family protein | LC |
           chr4:36982943-36978372 | 20130731
          Length = 522

 Score = 52.8 bits (125), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 72/171 (42%), Gaps = 14/171 (8%)

Query: 373 KEWGCMLCGVTAPDENSLNLHLNGKKHKTKEAALEAEKIVMXXXXXXXXXXXXXXXXXII 432
           +EW C +C VT   E  L  HLNG+KH+    AL ++K                     I
Sbjct: 247 REWTCAICLVTTSREKDLISHLNGRKHRDTSEALISKK----QPTRQKQKGAEATTNKTI 302

Query: 433 TTTSGFNAKEDIKTHQALGGEDMTQQNVDSSAAEANKEEQVVQ----KSQNIGVSEINEV 488
            T +    K++ +  Q         + +D       K++  V      SQN   + +   
Sbjct: 303 ATDNKKIPKKNGERFQTEKKNIKYLEAIDKKEISVTKQDNPVMPKIASSQNASSATVETK 362

Query: 489 TTEEADKT-----NAFVGREMK-FWGCKLCGVTATDASSLNAHLFGRKHKA 533
            T ++DK       +   +E++  W C LC VT +   +LN+HL GRKH+A
Sbjct: 363 GTAKSDKAGEEYLKSSTQKELQEEWPCALCSVTTSSKITLNSHLNGRKHRA 413