Miyakogusa Predicted Gene

Lj4g3v1983570.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1983570.2 Non Characterized Hit- tr|B9STR2|B9STR2_RICCO
Putative uncharacterized protein OS=Ricinus communis G,76.47,1e-16,
,CUFF.50056.2
         (130 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g130830.1 | DNase I superfamily protein | HC | chr4:545223...   258   1e-69

>Medtr4g130830.1 | DNase I superfamily protein | HC |
           chr4:54522347-54521099 | 20130731
          Length = 167

 Score =  258 bits (659), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 122/130 (93%), Positives = 126/130 (96%)

Query: 1   MDEFSPRARRRSALLTWQHIASLPPSLPVVYCGGFNTQKESTTGRFLLGRSREHGVVGDM 60
           MDE S RARRRSALLTWQHIASLPPSLPVVYCG FNTQKESTTGRFLLGRSREHGVVGDM
Sbjct: 1   MDELSARARRRSALLTWQHIASLPPSLPVVYCGVFNTQKESTTGRFLLGRSREHGVVGDM 60

Query: 61  RDAWPSSRVRKNVSLIRTYHGFKGEKQGTLEYLKLIFRALCLCWDRQTQDLHIDWIFFRG 120
           RDAWPS+RVRKNVSLIRTYHGFKG+KQGT+EYLKLIFRALCLCWDRQTQDLH+DWI FRG
Sbjct: 61  RDAWPSARVRKNVSLIRTYHGFKGDKQGTVEYLKLIFRALCLCWDRQTQDLHVDWILFRG 120

Query: 121 RSLIPVSCEV 130
           RSLIPVSCEV
Sbjct: 121 RSLIPVSCEV 130