Miyakogusa Predicted Gene

Lj4g3v1983570.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1983570.1 Non Characterized Hit- tr|I1JGP9|I1JGP9_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,95.22,0,Exo_endo_phos,Endonuclease/exonuclease/phosphatase; DNase
I-like,Endonuclease/exonuclease/phosphatas,CUFF.50056.1
         (273 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g130830.1 | DNase I superfamily protein | HC | chr4:545223...   259   2e-69
Medtr4g130840.1 | endonuclease/exonuclease/phosphatase family pr...   242   2e-64

>Medtr4g130830.1 | DNase I superfamily protein | HC |
           chr4:54522347-54521099 | 20130731
          Length = 167

 Score =  259 bits (663), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 122/130 (93%), Positives = 126/130 (96%)

Query: 144 MDEFSPRARRRSALLTWQHIASLPPSLPVVYCGGFNTQKESTTGRFLLGRSREHGVVGDM 203
           MDE S RARRRSALLTWQHIASLPPSLPVVYCG FNTQKESTTGRFLLGRSREHGVVGDM
Sbjct: 1   MDELSARARRRSALLTWQHIASLPPSLPVVYCGVFNTQKESTTGRFLLGRSREHGVVGDM 60

Query: 204 RDAWPSSRVRKNVSLIRTYHGFKGEKQGTLEYLKLIFRALCLCWDRQTQDLHIDWIFFRG 263
           RDAWPS+RVRKNVSLIRTYHGFKG+KQGT+EYLKLIFRALCLCWDRQTQDLH+DWI FRG
Sbjct: 61  RDAWPSARVRKNVSLIRTYHGFKGDKQGTVEYLKLIFRALCLCWDRQTQDLHVDWILFRG 120

Query: 264 RSLIPVSCEV 273
           RSLIPVSCEV
Sbjct: 121 RSLIPVSCEV 130


>Medtr4g130840.1 | endonuclease/exonuclease/phosphatase family
           protein | HC | chr4:54524333-54522505 | 20130731
          Length = 127

 Score =  242 bits (618), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 113/123 (91%), Positives = 119/123 (96%)

Query: 1   MSVSLTVMTFNLHDDQPPDSPNSWEKRRDICISVITSYSPFILCTQQGVKAQLDFLQQGL 60
           MSVSLTVMT NLHDD+P DSPNSW+KRRDICISVITSYSP ILCTQQGVK QLDFLQQGL
Sbjct: 1   MSVSLTVMTLNLHDDEPQDSPNSWDKRRDICISVITSYSPIILCTQQGVKTQLDFLQQGL 60

Query: 61  PGYDQFGISRKGPQDSSDEHCTIFYDKEKVELLEGGTFWLSESPSVPGSMSWGSEVPCIA 120
           PGYDQFG+SRKGPQD++DEHCTIFYDKEKVELLEGGTFWLSESPSVPGS+SWGSEVPCIA
Sbjct: 61  PGYDQFGVSRKGPQDTTDEHCTIFYDKEKVELLEGGTFWLSESPSVPGSISWGSEVPCIA 120

Query: 121 TWA 123
           TWA
Sbjct: 121 TWA 123