Miyakogusa Predicted Gene

Lj4g3v1983490.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1983490.1 tr|G7JGQ4|G7JGQ4_MEDTR Eukaryotic translation
initiation factor 5A-1 OS=Medicago truncatula
GN=MTR_4,46.09,4e-18,eIF_5A: translation elongation factor
IF5A,Translation elongation factor IF5A;
IF5A_HYPUSINE,Transla,CUFF.50045.1
         (146 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g130917.1 | eukaryotic translation initiation factor 5A | ...   273   5e-74
Medtr4g109130.1 | eukaryotic translation initiation factor 5A4 |...   273   5e-74
Medtr5g042990.1 | eukaryotic translation initiation factor 5A4 |...   271   2e-73
Medtr3g437680.1 | eukaryotic translation initiation factor 5A4 |...   267   3e-72
Medtr3g437680.2 | eukaryotic translation initiation factor 5A4 |...   267   3e-72
Medtr4g130917.2 | eukaryotic translation initiation factor 5A | ...   240   4e-64
Medtr5g042990.3 | eukaryotic translation initiation factor 5A4 |...   236   4e-63
Medtr5g042990.4 | eukaryotic translation initiation factor 5A4 |...   236   4e-63
Medtr5g042990.2 | eukaryotic translation initiation factor 5A4 |...   236   5e-63
Medtr4g109130.2 | eukaryotic translation initiation factor 5A4 |...   202   9e-53
Medtr4g112440.1 | eukaryotic translation initiation factor 5A | ...   139   9e-34
Medtr4g130907.1 | eukaryotic translation initiation factor 5A | ...    95   3e-20

>Medtr4g130917.1 | eukaryotic translation initiation factor 5A | HC
           | chr4:54581914-54579116 | 20130731
          Length = 159

 Score =  273 bits (697), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 130/146 (89%), Positives = 138/146 (94%)

Query: 1   MSDEEHQFDSHADSGASKTYPMQAGTNRKNGYIVIRSRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEH F+  AD+GASKTYP QAGT RKNGYIVI+SRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFEPAADAGASKTYPQQAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VAIDVFNGRKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDNGGTKDDLKLPTD 120
           VAID+FNG+KLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDNG TKDDLKLPTD
Sbjct: 61  VAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDNGSTKDDLKLPTD 120

Query: 121 ETLLAQIKDGFNEGKDLVVSVMSAMG 146
           ++LL QIKDGF +GKDLVVSVMSAMG
Sbjct: 121 DSLLTQIKDGFADGKDLVVSVMSAMG 146


>Medtr4g109130.1 | eukaryotic translation initiation factor 5A4 | HC
           | chr4:45278237-45276043 | 20130731
          Length = 160

 Score =  273 bits (697), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 129/146 (88%), Positives = 138/146 (94%)

Query: 1   MSDEEHQFDSHADSGASKTYPMQAGTNRKNGYIVIRSRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHQF+S AD+GASKTYP QAGT RKNGYIVI++RPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHQFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VAIDVFNGRKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDNGGTKDDLKLPTD 120
           VAID+F  +KLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLT+NG TKDDLKLPTD
Sbjct: 61  VAIDIFTSKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLKLPTD 120

Query: 121 ETLLAQIKDGFNEGKDLVVSVMSAMG 146
           ++LL QIKDGF EGKDLVVSVMSAMG
Sbjct: 121 DSLLTQIKDGFAEGKDLVVSVMSAMG 146


>Medtr5g042990.1 | eukaryotic translation initiation factor 5A4 | HC
           | chr5:18907263-18905199 | 20130731
          Length = 159

 Score =  271 bits (692), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 128/146 (87%), Positives = 139/146 (95%)

Query: 1   MSDEEHQFDSHADSGASKTYPMQAGTNRKNGYIVIRSRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEH F+S AD+GASKTYP QAGT RKNG+IVI++RPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGHIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VAIDVFNGRKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDNGGTKDDLKLPTD 120
           V ID+F G+KLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLT++GGTKDDLKLPTD
Sbjct: 61  VGIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTESGGTKDDLKLPTD 120

Query: 121 ETLLAQIKDGFNEGKDLVVSVMSAMG 146
           ETLL+QIKDGF EGKDL+VSVMSAMG
Sbjct: 121 ETLLSQIKDGFGEGKDLIVSVMSAMG 146


>Medtr3g437680.1 | eukaryotic translation initiation factor 5A4 | HC
           | chr3:12821900-12831383 | 20130731
          Length = 160

 Score =  267 bits (682), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 126/146 (86%), Positives = 136/146 (93%)

Query: 1   MSDEEHQFDSHADSGASKTYPMQAGTNRKNGYIVIRSRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEH F+S AD+GASKTYP QAGT RKNGYIVI++RPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VAIDVFNGRKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDNGGTKDDLKLPTD 120
           VAID+F  +KLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLT+NG TKDDLKLPTD
Sbjct: 61  VAIDIFTSKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLKLPTD 120

Query: 121 ETLLAQIKDGFNEGKDLVVSVMSAMG 146
           + LL QIK+GF EGKDLVVSVMS+MG
Sbjct: 121 DNLLTQIKEGFAEGKDLVVSVMSSMG 146


>Medtr3g437680.2 | eukaryotic translation initiation factor 5A4 | HC
           | chr3:12827467-12831667 | 20130731
          Length = 160

 Score =  267 bits (682), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 126/146 (86%), Positives = 136/146 (93%)

Query: 1   MSDEEHQFDSHADSGASKTYPMQAGTNRKNGYIVIRSRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEH F+S AD+GASKTYP QAGT RKNGYIVI++RPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VAIDVFNGRKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDNGGTKDDLKLPTD 120
           VAID+F  +KLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLT+NG TKDDLKLPTD
Sbjct: 61  VAIDIFTSKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLKLPTD 120

Query: 121 ETLLAQIKDGFNEGKDLVVSVMSAMG 146
           + LL QIK+GF EGKDLVVSVMS+MG
Sbjct: 121 DNLLTQIKEGFAEGKDLVVSVMSSMG 146


>Medtr4g130917.2 | eukaryotic translation initiation factor 5A | HC
           | chr4:54581812-54579168 | 20130731
          Length = 150

 Score =  240 bits (612), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 112/127 (88%), Positives = 120/127 (94%)

Query: 1   MSDEEHQFDSHADSGASKTYPMQAGTNRKNGYIVIRSRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEH F+  AD+GASKTYP QAGT RKNGYIVI+SRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFEPAADAGASKTYPQQAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VAIDVFNGRKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDNGGTKDDLKLPTD 120
           VAID+FNG+KLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDNG TKDDLKLPTD
Sbjct: 61  VAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDNGSTKDDLKLPTD 120

Query: 121 ETLLAQI 127
           ++LL Q+
Sbjct: 121 DSLLTQM 127


>Medtr5g042990.3 | eukaryotic translation initiation factor 5A4 | HC
           | chr5:18907263-18905255 | 20130731
          Length = 141

 Score =  236 bits (603), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 110/127 (86%), Positives = 121/127 (95%)

Query: 1   MSDEEHQFDSHADSGASKTYPMQAGTNRKNGYIVIRSRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEH F+S AD+GASKTYP QAGT RKNG+IVI++RPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGHIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VAIDVFNGRKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDNGGTKDDLKLPTD 120
           V ID+F G+KLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLT++GGTKDDLKLPTD
Sbjct: 61  VGIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTESGGTKDDLKLPTD 120

Query: 121 ETLLAQI 127
           ETLL+Q+
Sbjct: 121 ETLLSQV 127


>Medtr5g042990.4 | eukaryotic translation initiation factor 5A4 | HC
           | chr5:18907263-18905199 | 20130731
          Length = 141

 Score =  236 bits (603), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 110/127 (86%), Positives = 121/127 (95%)

Query: 1   MSDEEHQFDSHADSGASKTYPMQAGTNRKNGYIVIRSRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEH F+S AD+GASKTYP QAGT RKNG+IVI++RPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGHIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VAIDVFNGRKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDNGGTKDDLKLPTD 120
           V ID+F G+KLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLT++GGTKDDLKLPTD
Sbjct: 61  VGIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTESGGTKDDLKLPTD 120

Query: 121 ETLLAQI 127
           ETLL+Q+
Sbjct: 121 ETLLSQV 127


>Medtr5g042990.2 | eukaryotic translation initiation factor 5A4 | HC
           | chr5:18907263-18905199 | 20130731
          Length = 146

 Score =  236 bits (602), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 110/127 (86%), Positives = 121/127 (95%)

Query: 1   MSDEEHQFDSHADSGASKTYPMQAGTNRKNGYIVIRSRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEH F+S AD+GASKTYP QAGT RKNG+IVI++RPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGHIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VAIDVFNGRKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDNGGTKDDLKLPTD 120
           V ID+F G+KLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLT++GGTKDDLKLPTD
Sbjct: 61  VGIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTESGGTKDDLKLPTD 120

Query: 121 ETLLAQI 127
           ETLL+Q+
Sbjct: 121 ETLLSQV 127


>Medtr4g109130.2 | eukaryotic translation initiation factor 5A4 | HC
           | chr4:45278237-45276093 | 20130731
          Length = 124

 Score =  202 bits (514), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 97/120 (80%), Positives = 104/120 (86%)

Query: 1   MSDEEHQFDSHADSGASKTYPMQAGTNRKNGYIVIRSRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHQF+S AD+GASKTYP QAGT RKNGYIVI++RPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHQFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VAIDVFNGRKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDNGGTKDDLKLPTD 120
           VAID+F  +KLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVS+L         LKL  D
Sbjct: 61  VAIDIFTSKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSVLFALTKVSVCLKLLID 120


>Medtr4g112440.1 | eukaryotic translation initiation factor 5A | HC
           | chr4:46048544-46047233 | 20130731
          Length = 93

 Score =  139 bits (350), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 67/102 (65%), Positives = 75/102 (73%), Gaps = 10/102 (9%)

Query: 1   MSDEEHQFDSHADSGASKTYPMQAGTNRKNGYIVIRSRPCKVVEVSTSKTGKHGHAKCHF 60
           M +   QF+S AD+GA KT+P QAGT RKNGY++I+ RPCKVVEV TSKTGKHGHAKCHF
Sbjct: 1   MVEVAQQFESMADAGAFKTFPQQAGTIRKNGYVLIKGRPCKVVEVQTSKTGKHGHAKCHF 60

Query: 61  VAIDVFNGRKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFV 102
           V ID+    KLEDIVP SHNCDVPHV           EDGFV
Sbjct: 61  VGIDMVTAEKLEDIVPFSHNCDVPHV----------VEDGFV 92


>Medtr4g130907.1 | eukaryotic translation initiation factor 5A | HC
           | chr4:54576006-54573628 | 20130731
          Length = 145

 Score = 94.7 bits (234), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 59/128 (46%), Positives = 66/128 (51%), Gaps = 48/128 (37%)

Query: 18  KTYPMQAGTNRKNGYIVIRSRPCKVVEVSTSKTGKHGHAKCHFVAIDVFNGRKLEDIVPS 77
           KTYP+QAG  R+NGYIVI SRP                                      
Sbjct: 42  KTYPLQAGNIRRNGYIVIESRP-------------------------------------- 63

Query: 78  SHNCDVPHVNRTDYQLIDISEDGFVSLLTDNGGTKDDLKLPTDETLLAQIKDGFNEGKDL 137
              C VPHVNR D +LIDISEDG VSLLTDNG TKD L       +L  IK+ F EGKDL
Sbjct: 64  ---CKVPHVNRADDRLIDISEDGSVSLLTDNGSTKDTL-------VLGFIKEEFAEGKDL 113

Query: 138 VVSVMSAM 145
           +V V+SAM
Sbjct: 114 MVGVVSAM 121