Miyakogusa Predicted Gene

Lj4g3v1983390.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1983390.1 Non Characterized Hit- tr|F6HUB5|F6HUB5_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,26.99,3e-18,Broad-Complex, Tramtrack and Bric a brac,BTB/POZ-like;
POTASSIUM CHANNEL TETRAMERISATION DOMAIN-CONT,CUFF.50036.1
         (442 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g130970.1 | potassium channel tetramerization domain prote...   829   0.0  
Medtr7g088170.1 | BTB/POZ domain plant protein | HC | chr7:34314...    88   1e-17
Medtr8g098485.1 | BTB/POZ domain plant protein | HC | chr8:41080...    81   3e-15

>Medtr4g130970.1 | potassium channel tetramerization domain protein
           | HC | chr4:54613340-54615434 | 20130731
          Length = 442

 Score =  829 bits (2141), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 398/442 (90%), Positives = 415/442 (93%)

Query: 1   MGVQNDRVKFNVGGRVLETTATTLANAGRNSMLGAMLDENWDLLPDNGSVKFIDRNPDCF 60
           MGV NDRVKFNVGGRV ETTATTLANAGRNSMLGAMLDENW+LL DNGS KFIDRN DCF
Sbjct: 1   MGVINDRVKFNVGGRVFETTATTLANAGRNSMLGAMLDENWNLLQDNGSEKFIDRNADCF 60

Query: 61  AVLLDLLRTGELYIPPNLPEKLLYREALYYGVLDHVRTAKWGQFDGNRLRLSRSVQGQAP 120
           +V+LDLLRTGELYIP N+PEKLLYREAL+YGVLDHVR+AKWGQFDGNRLRLS SVQGQAP
Sbjct: 61  SVILDLLRTGELYIPQNVPEKLLYREALFYGVLDHVRSAKWGQFDGNRLRLSCSVQGQAP 120

Query: 121 GDGTAIRAGPDGGCCVAHGSMVHVYNWMLDEHPPLNLDYQRVNDVGWVDPDNIVIGVSER 180
           GDGTAIRAGPDGGCCVAHG MVHVY+WML+EH PLNLDYQRVNDVGWVDP+NIVIGVSER
Sbjct: 121 GDGTAIRAGPDGGCCVAHGCMVHVYDWMLEEHCPLNLDYQRVNDVGWVDPNNIVIGVSER 180

Query: 181 LGRGDGGMGLFTSHTGELRYKFQVSHENQVKSYTAGALSFSSDYKIFSSCKGRSNEYGVG 240
           LGRGDGGMGLF+SH GELRYKFQVSHEN VKSYTAGALSFSSDYKIFSSCKGRSNEYGVG
Sbjct: 181 LGRGDGGMGLFSSHNGELRYKFQVSHENHVKSYTAGALSFSSDYKIFSSCKGRSNEYGVG 240

Query: 241 VWDQVTGKQIDFFYEPVGWSLGDADRLQWMEGSNCLLVATMFPRKDNCYISLLDFRQKRM 300
           VWDQVTGKQIDFFYEP+GWSLGDAD+LQW+EGSNCLLVATMFPRKDNCYISLLDFR+K+M
Sbjct: 241 VWDQVTGKQIDFFYEPLGWSLGDADKLQWLEGSNCLLVATMFPRKDNCYISLLDFREKKM 300

Query: 301 VWCWSDVGAPLAVDEKRVRDAIAMEDNNSICVVNEFEDLGFMDLXXXXXXXXXXXXXXXL 360
           VWCWSDVGA LAVDEKRVRDAIAMEDN+SICVVNEFE+LGFMDL               L
Sbjct: 301 VWCWSDVGATLAVDEKRVRDAIAMEDNSSICVVNEFEELGFMDLRSSAANSVRWSSRSRL 360

Query: 361 MKGKMPEEPCYPKLALHGGQLFSSMNDCISVFCGPEWVLTSRLRRSYGGSICDFSIGGDR 420
           MKGKMPEEPCYPKLALHGGQLFSSMNDCISVFCGPEWVLTSRLRRSYGGSICDFSIGGDR
Sbjct: 361 MKGKMPEEPCYPKLALHGGQLFSSMNDCISVFCGPEWVLTSRLRRSYGGSICDFSIGGDR 420

Query: 421 LFALHSEENVFDIWETPTPPII 442
           LFALHSEENVFDIWETPTPPII
Sbjct: 421 LFALHSEENVFDIWETPTPPII 442


>Medtr7g088170.1 | BTB/POZ domain plant protein | HC |
           chr7:34314692-34316625 | 20130731
          Length = 478

 Score = 88.2 bits (217), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 55/180 (30%), Positives = 89/180 (49%), Gaps = 6/180 (3%)

Query: 5   NDRVKFNVGGRVLETTATTLANAGRNSMLGAMLDENWDLLPDNGSVKFIDRNPDCFAVLL 64
            DR+K NVGG++ ETT +T+ + G +S+L A+ +       ++ +  FIDR+P+ F+V L
Sbjct: 16  TDRIKLNVGGKLFETTLSTIRSGGPDSLLFALSNR----FSNDPNPVFIDRDPEIFSVFL 71

Query: 65  DLLRTGEL-YIPPNLPEKLLYREALYYGVLDHVRTAKW-GQFDGNRLRLSRSVQGQAPGD 122
            LLRT  L        ++ L  EAL+YG+  H+R A     F G    +  SV+  + G 
Sbjct: 72  SLLRTNHLPSTARRFSKQELADEALFYGIDSHLRNATSPPPFSGIDASIVASVRPASEGL 131

Query: 123 GTAIRAGPDGGCCVAHGSMVHVYNWMLDEHPPLNLDYQRVNDVGWVDPDNIVIGVSERLG 182
            +   A  +G   +AHG  +  Y+W L     +      +N +  V P+   +G     G
Sbjct: 132 SSTFTAAENGSVWIAHGGQLSSYDWNLIHSATVRTHLDEINSICRVWPEIAAVGTESDAG 191


>Medtr8g098485.1 | BTB/POZ domain plant protein | HC |
           chr8:41080261-41078413 | 20130731
          Length = 456

 Score = 80.9 bits (198), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 107/478 (22%), Positives = 183/478 (38%), Gaps = 91/478 (19%)

Query: 8   VKFNVGGRVLETTATTLANAGRNSMLGAMLDENWDLLPDNGSVKFIDRNPDCFAVLLDLL 67
           V  +VGG++ +TT  TL +AG  +    +   +    P      FIDR+PD F++LL LL
Sbjct: 20  VTIDVGGQIFQTTKQTLTSAGPKTFFSTISQTSSPYTP------FIDRDPDIFSLLLSLL 73

Query: 68  RTGELYIPPNLPEKL-------LYREALYYGVLDHV--RTAKWGQFDGNRLRLSRSVQGQ 118
           RTG      NLP K        L  E+ +YG+ + +    +   QF+   L+ S  +   
Sbjct: 74  RTG------NLPSKAKSFDLQDLIIESKFYGIENLLINSLSNPSQFEPFNLQNSLQLPLN 127

Query: 119 APGDGTAIRAGPDGGCCVAHGSMVHVYNWMLDEHPPLNLDYQRVNDVGWVDPDNIVIGVS 178
                + +   P G   VAHGS +  ++W L     +   +  V+ +  + P     G +
Sbjct: 128 GRDSPSTVSTTPYGSLHVAHGSKITTFDWSLRRKSTILTHFTAVDSLLALSPSLAAAGAN 187

Query: 179 ERLGRGDGGMGLFTSHTGELRYKFQVSHENQVKS-YTAGALSFSSDYKIFSSCKGRSNEY 237
           +       G+ +     G +  K  +  EN  KS  T  A+  S +    S    R N  
Sbjct: 188 DF-----SGLQILDLENGYV--KDTLIWENVTKSGSTVQAIGSSPENMFVSFESSRRNSN 240

Query: 238 GVGVWD-------------QVTGKQIDFFYEPVGWSLGDADRLQWMEGSNCLLVATMF-- 282
            + V+D             ++ G  ID        S   A +LQW+E  N L+ +     
Sbjct: 241 SILVYDLHSLRPVTEIAHNEIYGADID--------SAIPATKLQWIESHNLLMASGSHSG 292

Query: 283 PRKDNCYISLLDFRQKRMVW-------CWSDVGAPLAVDEK-----RVRDAIAMEDNNSI 330
           P   +  + L D R   +VW       C++DV    ++D          +A  M+  N  
Sbjct: 293 PSGVSGNVRLWDVRSGNVVWEISEKVDCFADVTVSDSLDAMFKVGVNSGEAFYMDLKNLS 352

Query: 331 CVVNEFEDLGFMDLXXXXXXXXXXXXXXXLMKGKMPEEPCYPKLALHGGQLFSSMNDCIS 390
              N +  LG                   ++ GK     C  K+   G Q+F +    + 
Sbjct: 353 SEKNSWVCLG---------------DKRKVLNGKKEGFGC--KIETQGNQVFCTKGGDVE 395

Query: 391 VFCGP----------EWVLTSRLRRSYGGSICDFSIGGDRLFALHSEENVFDIWETPT 438
           ++             +  L  R++   G  I + + GG R+F    +    ++W++ +
Sbjct: 396 LWSDIIMGSSNNRIFKKNLMGRVQDMGGAKITNLAFGGSRMFLTRKDLQCVEVWQSSS 453