Miyakogusa Predicted Gene

Lj4g3v1947720.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1947720.1 Non Characterized Hit- tr|C5XWX7|C5XWX7_SORBI
Putative uncharacterized protein Sb04g005696 (Fragment,51.52,4e-18,
,CUFF.50049.1
         (144 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g116160.1 | palmitoyltransferase TIP1 | HC | chr4:48032435...   158   1e-39
Medtr4g116160.3 | palmitoyltransferase TIP1 | HC | chr4:48034574...   158   2e-39
Medtr1g112830.1 | DHHC-type zinc finger protein | HC | chr1:5111...    89   1e-18
Medtr1g112820.1 | translation initiation factor IF-3 | HC | chr1...    87   8e-18
Medtr4g092760.2 | palmitoyltransferase TIP1 | HC | chr4:36790608...    66   9e-12
Medtr4g092760.1 | palmitoyltransferase TIP1 | HC | chr4:36789301...    66   1e-11

>Medtr4g116160.1 | palmitoyltransferase TIP1 | HC |
           chr4:48032435-48040442 | 20130731
          Length = 642

 Score =  158 bits (400), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 84/141 (59%), Positives = 92/141 (65%)

Query: 1   MANVMRYSYLRGPGGRFRNPYDHGIKKNCSDFLINGYNEDVEVVEELGQSEEGVGMMHMT 60
           MAN +RYSYLRGPGGRFRNPYDHGIKKNCSDFLINGYNED+E VEE G SEEG+GMMHM 
Sbjct: 501 MANALRYSYLRGPGGRFRNPYDHGIKKNCSDFLINGYNEDLEYVEESGNSEEGLGMMHMA 560

Query: 61  RNSNLANGDSHSHSEHATGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCSHANQGKT 120
           R S + NGDSHSHS+HA G                                CSH+NQGKT
Sbjct: 561 RGSTITNGDSHSHSDHANGNGNGHVVINVDSNSTNSKTHHGHSNGHVHSSHCSHSNQGKT 620

Query: 121 RNDSTPVXXXXXXXRNSRSVA 141
           RNDS PV       RN+RSV+
Sbjct: 621 RNDSIPVGLGLGLGRNTRSVS 641


>Medtr4g116160.3 | palmitoyltransferase TIP1 | HC |
           chr4:48034574-48040442 | 20130731
          Length = 469

 Score =  158 bits (399), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 84/141 (59%), Positives = 92/141 (65%)

Query: 1   MANVMRYSYLRGPGGRFRNPYDHGIKKNCSDFLINGYNEDVEVVEELGQSEEGVGMMHMT 60
           MAN +RYSYLRGPGGRFRNPYDHGIKKNCSDFLINGYNED+E VEE G SEEG+GMMHM 
Sbjct: 328 MANALRYSYLRGPGGRFRNPYDHGIKKNCSDFLINGYNEDLEYVEESGNSEEGLGMMHMA 387

Query: 61  RNSNLANGDSHSHSEHATGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCSHANQGKT 120
           R S + NGDSHSHS+HA G                                CSH+NQGKT
Sbjct: 388 RGSTITNGDSHSHSDHANGNGNGHVVINVDSNSTNSKTHHGHSNGHVHSSHCSHSNQGKT 447

Query: 121 RNDSTPVXXXXXXXRNSRSVA 141
           RNDS PV       RN+RSV+
Sbjct: 448 RNDSIPVGLGLGLGRNTRSVS 468


>Medtr1g112830.1 | DHHC-type zinc finger protein | HC |
           chr1:51116805-51114479 | 20130731
          Length = 634

 Score = 89.0 bits (219), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 39/46 (84%), Positives = 41/46 (89%)

Query: 1   MANVMRYSYLRGPGGRFRNPYDHGIKKNCSDFLINGYNEDVEVVEE 46
           M N  RYSYL+GP GRFRNPYDHGIKKNCSDFLINGYNED+E VEE
Sbjct: 578 MINHERYSYLKGPDGRFRNPYDHGIKKNCSDFLINGYNEDLEYVEE 623


>Medtr1g112820.1 | translation initiation factor IF-3 | HC |
           chr1:51109122-51095940 | 20130731
          Length = 949

 Score = 86.7 bits (213), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 36/43 (83%), Positives = 39/43 (90%)

Query: 1   MANVMRYSYLRGPGGRFRNPYDHGIKKNCSDFLINGYNEDVEV 43
           M N  RYSYL+GP GRFRNPYDHGIKKNCSDFLINGYNED+E+
Sbjct: 438 MINHERYSYLKGPDGRFRNPYDHGIKKNCSDFLINGYNEDLEI 480


>Medtr4g092760.2 | palmitoyltransferase TIP1 | HC |
           chr4:36790608-36781498 | 20130731
          Length = 451

 Score = 66.2 bits (160), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 26/40 (65%), Positives = 32/40 (80%)

Query: 1   MANVMRYSYLRGPGGRFRNPYDHGIKKNCSDFLINGYNED 40
           +AN  RY YLRGP GRFRNPY+HG  KNC+DFL+ G+ +D
Sbjct: 399 LANSTRYEYLRGPDGRFRNPYNHGWWKNCADFLLLGHTDD 438


>Medtr4g092760.1 | palmitoyltransferase TIP1 | HC |
           chr4:36789301-36781922 | 20130731
          Length = 540

 Score = 65.9 bits (159), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 26/40 (65%), Positives = 32/40 (80%)

Query: 1   MANVMRYSYLRGPGGRFRNPYDHGIKKNCSDFLINGYNED 40
           +AN  RY YLRGP GRFRNPY+HG  KNC+DFL+ G+ +D
Sbjct: 488 LANSTRYEYLRGPDGRFRNPYNHGWWKNCADFLLLGHTDD 527