Miyakogusa Predicted Gene

Lj4g3v1932140.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1932140.1 Non Characterized Hit- tr|I1I0I1|I1I0I1_BRADI
Uncharacterized protein OS=Brachypodium distachyon GN=,71.43,2e-18,GB
DEF: VPS13-LIKE PROTEIN,NULL; VACUOLAR PROTEIN SORTING-ASSOCIATED
PROTEIN (VPS13),Vacuolar
protei,NODE_46033_length_142_cov_19.838028.path2.1
         (56 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g007250.1 | vacuolar protein sorting-associated protein, p...   115   1e-26

>Medtr2g007250.1 | vacuolar protein sorting-associated protein,
            putative | HC | chr2:875474-913892 | 20130731
          Length = 3509

 Score =  115 bits (288), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 51/54 (94%), Positives = 53/54 (98%)

Query: 2    ASWESIQQILIRHYNRQLLHETYKLFGSAGFIGNPLGFARSIGHGIRDFLSVPA 55
            ASWESIQ+ILIRHYNRQLLHETYKLFGSAG IGNPLGFARS+GHGIRDFLSVPA
Sbjct: 3120 ASWESIQEILIRHYNRQLLHETYKLFGSAGVIGNPLGFARSMGHGIRDFLSVPA 3173