Miyakogusa Predicted Gene

Lj4g3v1920940.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1920940.1 Non Characterized Hit- tr|Q84S69|Q84S69_ORYSJ
Putative uncharacterized protein P0458H05.117 OS=Oryza,42.2,2e-16,no
description,Armadillo-like helical; seg,NULL; ARM
repeat,Armadillo-type fold,CUFF.49959.1
         (206 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g115690.1 | hypothetical protein | HC | chr4:47810138-4781...   279   1e-75
Medtr3g106630.1 | hypothetical protein | HC | chr3:49281423-4927...   183   8e-47
Medtr4g014150.1 | hypothetical protein | HC | chr4:3928903-39278...   127   9e-30

>Medtr4g115690.1 | hypothetical protein | HC |
           chr4:47810138-47811531 | 20130731
          Length = 360

 Score =  279 bits (714), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 139/194 (71%), Positives = 162/194 (83%), Gaps = 9/194 (4%)

Query: 13  DEKCQQPVREHAGMAIAALIRFNKDVFVGQVLMGPTVRALVSMASVDSLDVLCSLVKSIR 72
           D KC   +REHAG AI+ALIRFNKDVFVG+VLM PTV AL+ + SV S++VLCSL++ IR
Sbjct: 176 DPKCSHRIREHAGFAISALIRFNKDVFVGEVLMNPTVEALIDIGSVRSIEVLCSLIRLIR 235

Query: 73  SPFVDEIESNGEIPKIIALLGSDDLQLTVLAVEVVLEIGYFGRKEAIEAMMKEGVVEKLV 132
           SP VDEIESNGEI KIIALL SD+++L++LA+E VLEIGYFGRKEA+E M+KEGVVEK V
Sbjct: 236 SPIVDEIESNGEITKIIALLNSDNMKLSLLAMECVLEIGYFGRKEAVEGMLKEGVVEKFV 295

Query: 133 ELQRLEVEGGGGGMRHPFASCVAMFAVQLDVGEGLRQREKRALKPEILERVRKASLSDAE 192
           ELQRLE E         FASCVA FAVQL+VGEGLRQREKR+ K EIL RVR+A +SDAE
Sbjct: 296 ELQRLESE---------FASCVARFAVQLEVGEGLRQREKRSFKGEILVRVREACVSDAE 346

Query: 193 SATIVAEVLWGSSP 206
           +ATIVAEVLWG+SP
Sbjct: 347 AATIVAEVLWGTSP 360


>Medtr3g106630.1 | hypothetical protein | HC |
           chr3:49281423-49279247 | 20130731
          Length = 383

 Score =  183 bits (465), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 101/201 (50%), Positives = 135/201 (67%), Gaps = 14/201 (6%)

Query: 20  VREHAGMAIAALIRFNKDVFVGQVLMGPTVRALVSMASVDSLDVLCSLVKSIRSPFVDEI 79
           VRE + MAIA L++FNK+VFVG VLMGPT++AL++M+S  S+ V+  LV+ IRSP VDEI
Sbjct: 183 VREESAMAIADLVKFNKNVFVGLVLMGPTIKALIAMSSECSIKVISLLVRLIRSPLVDEI 242

Query: 80  ESNGEIPKIIALLGSDDLQLTVLAVEVVLEIGYFGRKEAIEAMMKEGVVEKLVELQRLEV 139
            SNG IPKII  L S D  L V A++ V E+ Y GR+E +EAM+++ +V+ L+ LQR E 
Sbjct: 243 LSNGMIPKIIGFLLSSDWCLRVAALDCVFELCYIGRREVVEAMLQQELVKILMILQRKED 302

Query: 140 EGGGGGMRHP--------------FASCVAMFAVQLDVGEGLRQREKRALKPEILERVRK 185
                 +R                F  CV+ FA+Q+++GEGL   EKR +K EIL  V++
Sbjct: 303 LCDVEEIREKEKVLGVDYDLDDSVFDGCVSRFAIQVEIGEGLSSEEKREVKLEILRLVKE 362

Query: 186 ASLSDAESATIVAEVLWGSSP 206
           AS SDAE AT+ AE+LWGSSP
Sbjct: 363 ASQSDAEFATVSAEILWGSSP 383


>Medtr4g014150.1 | hypothetical protein | HC | chr4:3928903-3927849
           | 20130731
          Length = 254

 Score =  127 bits (318), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 65/113 (57%), Positives = 83/113 (73%), Gaps = 18/113 (15%)

Query: 20  VREHAGMAIAALIRFNKDVFVGQVLMGPTVRALVSMASVDSLDVLCSLVKSIRSPFVDEI 79
           +REHAG AI+ALIRFNKDVFVG+VLM PTV AL+ + SV                 +DEI
Sbjct: 157 IREHAGFAISALIRFNKDVFVGEVLMNPTVEALIDIGSV-----------------LDEI 199

Query: 80  ESNGEIPKIIALLGSDDLQLTVLAVEVVLEIGYFGRKEAIEAMMKEGV-VEKL 131
           ESNGEI K+IALL S +++L++LA+E VLEIGYFGRKEA+E M+K  + ++KL
Sbjct: 200 ESNGEITKVIALLNSYNMKLSLLAMECVLEIGYFGRKEAVEGMLKHKLGIKKL 252