Miyakogusa Predicted Gene

Lj4g3v1881890.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1881890.2 Non Characterized Hit- tr|I1MU54|I1MU54_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,87.23,0,SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; TPR_1,Tetratricopeptide TPR-1;
TPR,Tetratricopeptid,CUFF.49908.2
         (705 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g115350.2 | CCR4-NOT transcription complex subunit-like pr...  1145   0.0  
Medtr4g115350.1 | CCR4-NOT transcription complex subunit-like pr...  1145   0.0  

>Medtr4g115350.2 | CCR4-NOT transcription complex subunit-like
           protein | HC | chr4:47634221-47641746 | 20130731
          Length = 857

 Score = 1145 bits (2961), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 563/704 (79%), Positives = 611/704 (86%), Gaps = 1/704 (0%)

Query: 2   LNTAIIWFHLHDYAKTLSVLEPLFQNIEPVDETTALHICLLLLDASLACHDASKSADVLT 61
           LN AIIWFHLHDYAKT+SVLEPLFQ I+P+ E+TALHICLLLLDASLACHDASKSADVLT
Sbjct: 155 LNIAIIWFHLHDYAKTVSVLEPLFQKIDPIKESTALHICLLLLDASLACHDASKSADVLT 214

Query: 62  YLEKAFGVSSVSQGDSGNTAQQQSANLITKSAPVXXXXXXXXXXXXXXXXXXNASENHLS 121
           YLE+AFGV S +Q D+GNT QQQSANL TKS PV                  NASEN+LS
Sbjct: 215 YLERAFGVGSANQVDNGNTTQQQSANLTTKSVPVTISESAADPSSSDLGSSANASENNLS 274

Query: 122 RAESEDTLDYEAMIVDMGGQSLARAMGPSSNDISRASVDRFSTVDLKLKLQLYKVQFLLL 181
           R  SED LDYEAMI+DMG Q+L R   P SN +SR  VDRFST+DLKLKLQL KVQFL+L
Sbjct: 275 RTFSEDGLDYEAMILDMGSQNLTRPTVPPSNYLSRTLVDRFSTLDLKLKLQLCKVQFLIL 334

Query: 182 TRNLKLAKREVKLAMNIARGRDSPMALLLKSELEYARGNHRKAIKLLMASSNRTDTVFSS 241
           TRNLK+AKREVKLAMNIARGRDS MAL+LKS+LEYARGNHRKAIKLLMASSNRTDT FSS
Sbjct: 335 TRNLKIAKREVKLAMNIARGRDSSMALILKSQLEYARGNHRKAIKLLMASSNRTDTEFSS 394

Query: 242 IFNNNLGCIYYQLGKYQTSSLFFSKALTNCSSLRKDQPLKLATFSQDNSLLIMYNCGVQY 301
           IFNNNLGCIYYQLGKYQTSS FFSKALTNCSSLRK+Q  KLATFSQD SLLI+YNCGVQ+
Sbjct: 395 IFNNNLGCIYYQLGKYQTSSFFFSKALTNCSSLRKEQQKKLATFSQDKSLLIIYNCGVQH 454

Query: 302 LACGKPVLAARCFQKASLVFYKQPLLWLRLSECCLMALEKGLIKSNRVPSENLEVGVCVV 361
           LACGKP+LAARCFQKASLVFYKQPLLWLRLSECCLMALEKGLIKS RVPSE +EVGVCVV
Sbjct: 455 LACGKPILAARCFQKASLVFYKQPLLWLRLSECCLMALEKGLIKSCRVPSEKMEVGVCVV 514

Query: 362 GMGKWRQLVVQDQIPGKGNVDSSEGNDCFSSENGRQKLSMSLARQCLLNALHLLDSYSTN 421
           G+ KWRQLVV+DQIPG G+++SS+G+DC   E+GR KLSMSLARQCLLNALHLLDSYSTN
Sbjct: 515 GLEKWRQLVVEDQIPGNGHMESSKGDDCVPGEDGRLKLSMSLARQCLLNALHLLDSYSTN 574

Query: 422 CLKSGLPSNSSVEEIDPNEVXXXXXXXXXXXHGVDSKAFSVAVGLGQVNSNGDVKEQKGG 481
            LKSGLPSNSSVE+ D +E+           HG DSKAFSVAV +GQVNSNGD KEQKGG
Sbjct: 575 RLKSGLPSNSSVED-DTSEMLPSKNLSRKNSHGADSKAFSVAVAVGQVNSNGDTKEQKGG 633

Query: 482 TSQELIQNSLSYYEDVRRRENQLIKQAVLANLAFVELELDNPVKALSVAKRLLELPECSR 541
            SQEL QNSLSYYEDV RR+NQL+KQAVLANLA+VELELDNPVKAL+ AK L ELPECSR
Sbjct: 634 ASQELFQNSLSYYEDVCRRDNQLVKQAVLANLAYVELELDNPVKALAAAKSLFELPECSR 693

Query: 542 IYIFLGRVYAAEALCLLNRPKEAAELLSIYLSGGNDVDLPFSQEDCEKWQAERTAEFEEV 601
           IYIFLG VYAAEALCLLNRPKEAA+ LS YLSGGN V+LPFSQ+DCEK Q ERT EFE+ 
Sbjct: 694 IYIFLGHVYAAEALCLLNRPKEAADYLSYYLSGGNSVELPFSQDDCEKLQVERTVEFEDG 753

Query: 602 NGGSTATNNSSFEDTRRIVFLKPEEARATIYANFAALSAMQGEFEKANVLVTQALSILPN 661
           NGGSTA  NSS +D + IVFLKPEEARA+IYANFA +SAMQGE EKAN+LVTQALSILPN
Sbjct: 754 NGGSTAAKNSSLQDPQSIVFLKPEEARASIYANFAVMSAMQGELEKANILVTQALSILPN 813

Query: 662 SPEAILTAVYVDLLVGKPQEALAKLKSCSRIRFLPSGVALNKSS 705
           SPEA LTAVYVDLL+GKPQEALAKLKSCSRIRFLPSGV+LNKSS
Sbjct: 814 SPEATLTAVYVDLLLGKPQEALAKLKSCSRIRFLPSGVSLNKSS 857


>Medtr4g115350.1 | CCR4-NOT transcription complex subunit-like
           protein | HC | chr4:47634207-47641746 | 20130731
          Length = 857

 Score = 1145 bits (2961), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 563/704 (79%), Positives = 611/704 (86%), Gaps = 1/704 (0%)

Query: 2   LNTAIIWFHLHDYAKTLSVLEPLFQNIEPVDETTALHICLLLLDASLACHDASKSADVLT 61
           LN AIIWFHLHDYAKT+SVLEPLFQ I+P+ E+TALHICLLLLDASLACHDASKSADVLT
Sbjct: 155 LNIAIIWFHLHDYAKTVSVLEPLFQKIDPIKESTALHICLLLLDASLACHDASKSADVLT 214

Query: 62  YLEKAFGVSSVSQGDSGNTAQQQSANLITKSAPVXXXXXXXXXXXXXXXXXXNASENHLS 121
           YLE+AFGV S +Q D+GNT QQQSANL TKS PV                  NASEN+LS
Sbjct: 215 YLERAFGVGSANQVDNGNTTQQQSANLTTKSVPVTISESAADPSSSDLGSSANASENNLS 274

Query: 122 RAESEDTLDYEAMIVDMGGQSLARAMGPSSNDISRASVDRFSTVDLKLKLQLYKVQFLLL 181
           R  SED LDYEAMI+DMG Q+L R   P SN +SR  VDRFST+DLKLKLQL KVQFL+L
Sbjct: 275 RTFSEDGLDYEAMILDMGSQNLTRPTVPPSNYLSRTLVDRFSTLDLKLKLQLCKVQFLIL 334

Query: 182 TRNLKLAKREVKLAMNIARGRDSPMALLLKSELEYARGNHRKAIKLLMASSNRTDTVFSS 241
           TRNLK+AKREVKLAMNIARGRDS MAL+LKS+LEYARGNHRKAIKLLMASSNRTDT FSS
Sbjct: 335 TRNLKIAKREVKLAMNIARGRDSSMALILKSQLEYARGNHRKAIKLLMASSNRTDTEFSS 394

Query: 242 IFNNNLGCIYYQLGKYQTSSLFFSKALTNCSSLRKDQPLKLATFSQDNSLLIMYNCGVQY 301
           IFNNNLGCIYYQLGKYQTSS FFSKALTNCSSLRK+Q  KLATFSQD SLLI+YNCGVQ+
Sbjct: 395 IFNNNLGCIYYQLGKYQTSSFFFSKALTNCSSLRKEQQKKLATFSQDKSLLIIYNCGVQH 454

Query: 302 LACGKPVLAARCFQKASLVFYKQPLLWLRLSECCLMALEKGLIKSNRVPSENLEVGVCVV 361
           LACGKP+LAARCFQKASLVFYKQPLLWLRLSECCLMALEKGLIKS RVPSE +EVGVCVV
Sbjct: 455 LACGKPILAARCFQKASLVFYKQPLLWLRLSECCLMALEKGLIKSCRVPSEKMEVGVCVV 514

Query: 362 GMGKWRQLVVQDQIPGKGNVDSSEGNDCFSSENGRQKLSMSLARQCLLNALHLLDSYSTN 421
           G+ KWRQLVV+DQIPG G+++SS+G+DC   E+GR KLSMSLARQCLLNALHLLDSYSTN
Sbjct: 515 GLEKWRQLVVEDQIPGNGHMESSKGDDCVPGEDGRLKLSMSLARQCLLNALHLLDSYSTN 574

Query: 422 CLKSGLPSNSSVEEIDPNEVXXXXXXXXXXXHGVDSKAFSVAVGLGQVNSNGDVKEQKGG 481
            LKSGLPSNSSVE+ D +E+           HG DSKAFSVAV +GQVNSNGD KEQKGG
Sbjct: 575 RLKSGLPSNSSVED-DTSEMLPSKNLSRKNSHGADSKAFSVAVAVGQVNSNGDTKEQKGG 633

Query: 482 TSQELIQNSLSYYEDVRRRENQLIKQAVLANLAFVELELDNPVKALSVAKRLLELPECSR 541
            SQEL QNSLSYYEDV RR+NQL+KQAVLANLA+VELELDNPVKAL+ AK L ELPECSR
Sbjct: 634 ASQELFQNSLSYYEDVCRRDNQLVKQAVLANLAYVELELDNPVKALAAAKSLFELPECSR 693

Query: 542 IYIFLGRVYAAEALCLLNRPKEAAELLSIYLSGGNDVDLPFSQEDCEKWQAERTAEFEEV 601
           IYIFLG VYAAEALCLLNRPKEAA+ LS YLSGGN V+LPFSQ+DCEK Q ERT EFE+ 
Sbjct: 694 IYIFLGHVYAAEALCLLNRPKEAADYLSYYLSGGNSVELPFSQDDCEKLQVERTVEFEDG 753

Query: 602 NGGSTATNNSSFEDTRRIVFLKPEEARATIYANFAALSAMQGEFEKANVLVTQALSILPN 661
           NGGSTA  NSS +D + IVFLKPEEARA+IYANFA +SAMQGE EKAN+LVTQALSILPN
Sbjct: 754 NGGSTAAKNSSLQDPQSIVFLKPEEARASIYANFAVMSAMQGELEKANILVTQALSILPN 813

Query: 662 SPEAILTAVYVDLLVGKPQEALAKLKSCSRIRFLPSGVALNKSS 705
           SPEA LTAVYVDLL+GKPQEALAKLKSCSRIRFLPSGV+LNKSS
Sbjct: 814 SPEATLTAVYVDLLLGKPQEALAKLKSCSRIRFLPSGVSLNKSS 857