Miyakogusa Predicted Gene

Lj4g3v1881760.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1881760.1 CUFF.49923.1
         (1044 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g036325.1 | hypothetical protein | LC | chr4:13081348-1308...    74   7e-13
Medtr4g120840.1 | hypothetical protein | HC | chr4:50046505-5004...    59   2e-08
Medtr4g115290.1 | hypothetical protein | HC | chr4:47599184-4760...    59   2e-08

>Medtr4g036325.1 | hypothetical protein | LC |
           chr4:13081348-13082899 | 20130731
          Length = 204

 Score = 73.9 bits (180), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 39/98 (39%), Positives = 59/98 (60%), Gaps = 2/98 (2%)

Query: 632 MIIMHDYP-LHMVEHPGFVAFVQNLQPQFNMVTFNTVQGDCVATYLMEKQNLMKYFEGVP 690
           MII+H+YP L +V+H GF A+ + LQ  F + + NTV+ D +  Y  EK   M   + + 
Sbjct: 1   MIIIHEYPPLSIVDHLGFRAYSEGLQHLFKVPSRNTVKSDIIKIYENEKLKTMGLLDKIE 60

Query: 691 GRLCLTLDVWTSS-QSVGYVFITGHFVDSDWKLQRRIL 727
            ++ LT  + T+S Q  GY+ IT H++  DW +Q RIL
Sbjct: 61  SKIALTSYMLTASNQKKGYMVITAHYISDDWSMQSRIL 98


>Medtr4g120840.1 | hypothetical protein | HC |
           chr4:50046505-50047138 | 20130731
          Length = 109

 Score = 59.3 bits (142), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/85 (36%), Positives = 46/85 (54%)

Query: 629 IARMIIMHDYPLHMVEHPGFVAFVQNLQPQFNMVTFNTVQGDCVATYLMEKQNLMKYFEG 688
           IAR++I+   P  +VE   F    + LQP +N+ +  TV  DC   +  EK  L+ YF+ 
Sbjct: 22  IARLVILSKLPFSVVESDRFNRLCKLLQPLWNIPSRRTVARDCFRMFRDEKFKLIAYFKS 81

Query: 689 VPGRLCLTLDVWTSSQSVGYVFITG 713
              +L LT  VWTS Q+  Y+ +T 
Sbjct: 82  DCSKLALTPKVWTSIQNFSYISLTA 106


>Medtr4g115290.1 | hypothetical protein | HC |
           chr4:47599184-47600003 | 20130731
          Length = 89

 Score = 58.9 bits (141), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/69 (50%), Positives = 41/69 (59%), Gaps = 4/69 (5%)

Query: 688 GVPGRLCLTLDVWTSSQSVGYVFITGHFVDSDWKLQRRILNVVMEPYPDSDS-AISHAVA 746
           GV G  C     WTS   +    I  H   +D  ++   LNVVMEPYPDSDS AISHAV+
Sbjct: 5   GVHG--CCLRSGWTSDDELDNTTIE-HNKLNDGAMRWLYLNVVMEPYPDSDSAAISHAVS 61

Query: 747 VCLSDWNIE 755
            CLSDWN +
Sbjct: 62  ACLSDWNFK 70