Miyakogusa Predicted Gene

Lj4g3v1881580.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1881580.1 Non Characterized Hit- tr|I1LZQ5|I1LZQ5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.18586 PE,70.22,0,FAMILY
NOT NAMED,NULL; seg,NULL; UBA-like,UBA-like; coiled-coil,NULL;
CUE,Ubiquitin system
component,NODE_12628_length_1819_cov_81.542053.path1.1
         (267 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g010100.1 | ubiquitin system component CUE protein | HC | ...   261   3e-70
Medtr2g104010.1 | ubiquitin system component CUE protein | HC | ...   216   2e-56
Medtr8g086400.1 | ubiquitin system component Cue protein, putati...    59   7e-09

>Medtr4g010100.1 | ubiquitin system component CUE protein | HC |
           chr4:2224229-2219531 | 20130731
          Length = 264

 Score =  261 bits (668), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 144/278 (51%), Positives = 184/278 (66%), Gaps = 25/278 (8%)

Query: 1   MSAIIVCGKRSALFQ---PSSPPISTKRIRCXXXXXXXXXXXXXXLLHHLTTLFPFMDPQ 57
           MSA  VCG + + F+   P SPP+S KR+RC              L   L  LFP MD  
Sbjct: 1   MSAA-VCGSKRSFFEEQLPPSPPLS-KRLRCSSSTSPIRFPTIPSLFDQLRNLFPHMDQL 58

Query: 58  LLEKALEECGNDLDSAIRSLNELRLGGSVHQSIDSAATGSDHVA----VDLNDQPQSQGE 113
           +LE+AL+EC NDLD+AI+SLNEL LG         AA G+   A    +D+N      G+
Sbjct: 59  VLERALQECDNDLDAAIKSLNELYLG---------AAGGNSGTAEESEIDVN---VDAGK 106

Query: 114 TKCDTEDAASEDQVAGQSYPLNGAEWVDHFVREMMSASNMDDAKARASRVLEALEKSICE 173
            + D   +ASE+Q    S P +GAEW+D FVREMM A+++DDA+ARA+R+LE LEKSI E
Sbjct: 107 LENDGNASASENQSTLNSLPADGAEWIDFFVREMMVATSVDDARARAARMLEVLEKSISE 166

Query: 174 RSRSET----ERENMMLKEQVEALIQENIILKRALCIQHERQKEYENKNQELKDLKQLVS 229
           R+R+E     ++EN+MLKEQ+E LI+E    K A  IQHER  +Y+NKNQEL+ LKQL S
Sbjct: 167 RARAEATDALQKENLMLKEQIEVLIKEKNSFKNAFRIQHERLSDYDNKNQELQHLKQLAS 226

Query: 230 QYQEQLRTLEVNNYALTMHLKQAEQSSSIPGHFHPDVF 267
           QYQEQ+RTLE+NNYAL MHLKQA+QS+   GHF PD+F
Sbjct: 227 QYQEQIRTLEMNNYALAMHLKQAQQSNGFQGHFPPDIF 264


>Medtr2g104010.1 | ubiquitin system component CUE protein | HC |
           chr2:44804731-44807628 | 20130731
          Length = 261

 Score =  216 bits (550), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 127/278 (45%), Positives = 175/278 (62%), Gaps = 28/278 (10%)

Query: 1   MSAIIVCGKRSALFQ--PSSPPIS-TKRIRCXXXXXXXXXXXXXXLLHHLTTLFPFMDPQ 57
           MSA  VCG + + F+  P SPP+S TKR+RC              L+ HL  LFP MD Q
Sbjct: 1   MSAA-VCGSKRSFFEDLPPSPPVSSTKRLRCSSSPIRLSFPT---LIDHLRNLFPNMDDQ 56

Query: 58  LLEKALEECGNDLDSAIRSLNELRLGGSVHQSIDSAATGSDHVAVDLNDQPQSQGETKC- 116
           ++E+AL+ECGNDLD+AI+SL+ L LG +   S+             L  QP +  ET   
Sbjct: 57  IIERALQECGNDLDAAIKSLHGLCLGSADENSV-------------LAPQPDAAVETGVF 103

Query: 117 --DTEDAASEDQVAGQSYPLNGAEWVDHFVREMMSASNMDDAKARASRVLEALEKSICER 174
             + + +AS +Q A  + P +G  W++ FV EM  A+++DDA+ARA+++LE LEKSI   
Sbjct: 104 ENNGDASASGNQPAENNLPADGPGWINLFVSEMSCATSVDDARARAAKLLEVLEKSISTH 163

Query: 175 SRS----ETERENMMLKEQVEALIQENIILKRALCIQHERQKEYENKNQELKDLKQLVSQ 230
           + S    + ++EN+MLK Q+E L +E    K A  IQ ER  +YE+K++EL+ LKQLVSQ
Sbjct: 164 ASSGEITDLQKENLMLKYQIEVLTKERNCFKSAFRIQLERLSDYEDKDRELQQLKQLVSQ 223

Query: 231 YQEQLRTLEVNNYALTMHLKQAEQ-SSSIPGHFHPDVF 267
           YQEQ+RTLEVNNYAL MHL QA++ ++  PG F PD F
Sbjct: 224 YQEQIRTLEVNNYALQMHLNQAQKYNNPFPGRFPPDGF 261


>Medtr8g086400.1 | ubiquitin system component Cue protein, putative
           | HC | chr8:35840363-35841900 | 20130731
          Length = 69

 Score = 58.5 bits (140), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 30/52 (57%), Positives = 36/52 (69%)

Query: 182 ENMMLKEQVEALIQENIILKRALCIQHERQKEYENKNQELKDLKQLVSQYQE 233
           EN+MLKEQ+E  I E    K    I+HER  +Y+NKNQEL+ LK L SQYQE
Sbjct: 18  ENLMLKEQIEVSIMEKNSFKNGFRIRHERLADYDNKNQELQHLKHLASQYQE 69