Miyakogusa Predicted Gene

Lj4g3v1881330.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1881330.1 Non Characterized Hit- tr|I1LZP3|I1LZP3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.26993
PE,80.49,0,seg,NULL,CUFF.49858.1
         (405 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g114900.1 | hypothetical protein | HC | chr4:47348985-4734...   587   e-168
Medtr7g087040.1 | F-box/RNI superfamily protein, putative | LC |...    61   2e-09

>Medtr4g114900.1 | hypothetical protein | HC |
           chr4:47348985-47346831 | 20130731
          Length = 406

 Score =  587 bits (1513), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 300/409 (73%), Positives = 329/409 (80%), Gaps = 9/409 (2%)

Query: 1   MPRPGPRPYECVRRAWHSERHQPIRGTIIQQIFRVVNDAHSPATKKNKEWQEKLPFVVLK 60
           MPRPGPRPYECVRRAWHSERHQP+RG+IIQQIFRVV +AH+PATKKNKEWQEKLP VVLK
Sbjct: 1   MPRPGPRPYECVRRAWHSERHQPLRGSIIQQIFRVVTEAHTPATKKNKEWQEKLPVVVLK 60

Query: 61  AEEIMYSKANSEAEYLNPDTLWDRLNDAVNTIIRRDEATETGDLLPPCVEAALNLGCKPV 120
           AEEIMYSKANSEAEYLN DTLWDRLNDAVNTIIRRDE TETGDLLPPCVEAALNLGCKPV
Sbjct: 61  AEEIMYSKANSEAEYLNSDTLWDRLNDAVNTIIRRDETTETGDLLPPCVEAALNLGCKPV 120

Query: 121 RTSRSDRHNNPRTYLXXXXXXXXXXXXXXXXXXXLNYARVTTSALASVPVSNS---THQS 177
           RTSRSDRHNNPRTYL                   LNYA+VTT AL+   VS+S    HQ+
Sbjct: 121 RTSRSDRHNNPRTYLGPRPQQPPSGSPKPVVGNPLNYAKVTTPALSPNHVSDSNQHVHQN 180

Query: 178 SKVMGNRSYPFSDNFPSGHHQPLAMEAKPSLNLGSVYPLYYVYDAREPQP--RSTALDNP 235
           SK  G+ +YP+  NFP    QPL MEAKP++N+GSVYPLYY  + REPQ   R+T  DN 
Sbjct: 181 SKPSGSGNYPY--NFPPSQQQPLTMEAKPTMNMGSVYPLYYSGETREPQAQVRTTVRDNT 238

Query: 236 CSDTIFVGRPVITPAPETSGIGLLEHTSYGRFHHAPNRIAKETAVGTTQEESQDGECDLS 295
            SD IFVGRPVITP PE SGIGLLE++ YGRF H  NRI +ETA+GT  +ES  GECDLS
Sbjct: 239 SSDMIFVGRPVITPVPEPSGIGLLENSRYGRFQHVANRIVQETALGT--QESPGGECDLS 296

Query: 296 LRLGQCLHPCSSSKSGSAYGIDDVSLGLSQEGSKFSHLSLQKNQEFCFHPREAGYGTIDP 355
           LRLGQCLHPCSS KS SA  ID V LGLSQEG+K+SH+ LQ+N+E   +PR AG+GTID 
Sbjct: 297 LRLGQCLHPCSSGKSSSASEIDGVGLGLSQEGNKYSHMPLQRNRELFLYPRGAGHGTIDS 356

Query: 356 NSRYNVEGGDQNLEATFRKRKAPLGNNEEDGQFCRHLGVPSNRFIGRPG 404
           +SR NVEG DQNLEA FRKRKAPL NNEEDGQFCRHLGVPSNRF GRPG
Sbjct: 357 SSRGNVEGEDQNLEAMFRKRKAPLANNEEDGQFCRHLGVPSNRFTGRPG 405


>Medtr7g087040.1 | F-box/RNI superfamily protein, putative | LC |
           chr7:33859934-33866416 | 20130731
          Length = 976

 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 29/39 (74%), Positives = 33/39 (84%)

Query: 30  QQIFRVVNDAHSPATKKNKEWQEKLPFVVLKAEEIMYSK 68
           Q I  VV +A +PATKKNKEWQE+LP VVLKAEEIM+SK
Sbjct: 932 QLIILVVFEARTPATKKNKEWQEQLPTVVLKAEEIMHSK 970