Miyakogusa Predicted Gene

Lj4g3v1880330.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1880330.1 Non Characterized Hit- tr|I3S3A7|I3S3A7_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,100,0,SUBFAMILY
NOT NAMED,NULL; XENOTROPIC AND POLYTROPIC RETROVIRUS RECEPTOR
1-RELATED,NULL;
coiled-coil,,NODE_11622_length_1004_cov_110.343628.path1.1
         (224 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g114550.1 | IDS4-like protein | HC | chr4:47091920-4708939...   371   e-103
Medtr1g012440.1 | IDS4-like protein | HC | chr1:2472129-2468189 ...   220   8e-58
Medtr3g107393.1 | IDS4-like protein | HC | chr3:49544686-4954608...   184   7e-47
Medtr4g027390.1 | phosphorus starvation-induced protein | HC | c...   176   1e-44
Medtr8g077020.1 | SPX domain protein | HC | chr8:32695837-326992...   144   9e-35
Medtr0262s0060.1 | SPX domain protein | HC | scaffold0262:17184-...   111   5e-25

>Medtr4g114550.1 | IDS4-like protein | HC | chr4:47091920-47089398 |
           20130731
          Length = 285

 Score =  371 bits (952), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 188/224 (83%), Positives = 197/224 (87%)

Query: 1   MSKEETDFRNLLENELDXXXXXXXXXXXXYIIRLKELQDRVAKVKASSEQMMKIRKEIVD 60
           MSKEE+DFRNLLENEL+            YIIRLKELQDRVAKVK  SE+MMKIRKEIVD
Sbjct: 62  MSKEESDFRNLLENELEKFNNFFVEKEEEYIIRLKELQDRVAKVKDYSEEMMKIRKEIVD 121

Query: 61  FHGEMVLLENYSALNYTGLVKILKKYDKRTGALIRLPFIQKVLQQPFFTTDLLYKLVKEC 120
           FHGEMVLLENYSALNYTGLVKILKKYDKRTGALIRLPFIQKVLQQPFFTTD+LYKLVKEC
Sbjct: 122 FHGEMVLLENYSALNYTGLVKILKKYDKRTGALIRLPFIQKVLQQPFFTTDMLYKLVKEC 181

Query: 121 ETMLDYLFPAIDLAASGETTPQAEVFDPSTSTTTKSDGLLIPKELAEIEYMESLYMKSTV 180
           ETMLDYLFP     A GE  P+AE  DPSTSTTT+SDGLLIPKEL EIEYMESLYMKSTV
Sbjct: 182 ETMLDYLFPVNVPPAVGEIIPEAEGCDPSTSTTTESDGLLIPKELEEIEYMESLYMKSTV 241

Query: 181 SALNVLQEIRSGSSTVSMFSLPPLQLSGVEETWKKIPVLEQTAK 224
           SAL+VL+EIRSGSSTVSMFSLPPLQ SG+EETWKKIPVLEQ AK
Sbjct: 242 SALHVLKEIRSGSSTVSMFSLPPLQSSGLEETWKKIPVLEQEAK 285


>Medtr1g012440.1 | IDS4-like protein | HC | chr1:2472129-2468189 |
           20130731
          Length = 274

 Score =  220 bits (561), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 115/210 (54%), Positives = 148/210 (70%), Gaps = 7/210 (3%)

Query: 1   MSKEETDFRNLLENELDXXXXXXXXXXXXYIIRLKELQDRVAKVKASSEQMMKIRKEIVD 60
           ++KE  DF  LLE E++            Y+I+ KELQD+VA  K+S  ++M + +EIVD
Sbjct: 60  VTKEVKDFLRLLEVEIEKFNGFFVEKEEEYVIKWKELQDKVAWAKSSDIELMTVGREIVD 119

Query: 61  FHGEMVLLENYSALNYTGLVKILKKYDKRTGALIRLPFIQKVLQQPFFTTDLLYKLVKEC 120
           FHGEMVLLENYSALNYTGLVKI+KKYDKRTGAL+RLPFIQ VL QPFF  D+L KLVKEC
Sbjct: 120 FHGEMVLLENYSALNYTGLVKIIKKYDKRTGALLRLPFIQDVLNQPFFKIDVLNKLVKEC 179

Query: 121 ETMLDYLFPAIDLAASGETTPQAEVF-----DPSTSTTTKSDGLLIPKELAEIEYMESLY 175
           E ML  +FP       G++   +EVF     + +T+  TK     +PKE +EI+ ME+++
Sbjct: 180 EVMLSIIFPKS--GPLGQSLSTSEVFEEVARETTTANETKETLDHVPKEFSEIQNMENIF 237

Query: 176 MKSTVSALNVLQEIRSGSSTVSMFSLPPLQ 205
           +K T SAL+ L+EIR GSSTVS++SLPPL 
Sbjct: 238 IKLTTSALDTLKEIRGGSSTVSIYSLPPLH 267


>Medtr3g107393.1 | IDS4-like protein | HC | chr3:49544686-49546089 |
           20130731
          Length = 258

 Score =  184 bits (466), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 103/196 (52%), Positives = 133/196 (67%), Gaps = 17/196 (8%)

Query: 6   TDFRNLLENELDXXXXXXXXXXXXYIIRLKELQDRVAKVKASSE-QMMKIRKEIVDFHGE 64
           + F  LLE E+D            YII+ KELQDRV +V   S+ ++M + +EIVDFHGE
Sbjct: 52  SHFLCLLEVEIDKFNTFFVNKEEEYIIKWKELQDRVDRVMDYSDLELMSLWREIVDFHGE 111

Query: 65  MVLLENYSALNYTGLVKILKKYDKRTGALIRLPFIQKVLQQPFFTTDLLYKLVKECETML 124
           MVLLENYSALNYTGLVKI+KK+DKRTG L+RLPFIQ+VL QPFF TD+L  LVKECE +L
Sbjct: 112 MVLLENYSALNYTGLVKIIKKHDKRTGGLLRLPFIQEVLNQPFFETDVLNNLVKECEVLL 171

Query: 125 DYLFPAIDLAASGETTPQAEVFDPSTSTTTKSDG-----LLIPKELAEIEYMESLYMKST 179
           + LF   D       +P      P TST+ +++      + +P+E+AEIE ME++ +K T
Sbjct: 172 NILFTNND-------SPSC----PCTSTSEENEENKEKLMQVPEEIAEIENMENVLIKLT 220

Query: 180 VSALNVLQEIRSGSST 195
           +SAL  L+EIR  SST
Sbjct: 221 LSALRTLEEIRGQSST 236


>Medtr4g027390.1 | phosphorus starvation-induced protein | HC |
           chr4:9466238-9462674 | 20130731
          Length = 261

 Score =  176 bits (446), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 102/218 (46%), Positives = 126/218 (57%), Gaps = 37/218 (16%)

Query: 2   SKEETDFRNLLENELDXXXXXXXXXXXXYIIRLKELQDRVAKV-------------KASS 48
            K E +F  LL NE+D            +IIR KE+Q R+ +V                 
Sbjct: 50  GKSEAEFMYLLNNEIDKFNGFFMEQEEDFIIRHKEVQQRIKRVVDLWGPNGSQPSEAEYK 109

Query: 49  EQMMKIRKEIVDFHGEMVLLENYSALNYTGLVKILKKYDKRTGALIRLPFIQKVLQQPFF 108
           E+M KIRK IVDFHGEMVLL NYS +NYTGL KILKKYDKRTG L+RLPFIQKVL+QPFF
Sbjct: 110 EEMEKIRKAIVDFHGEMVLLVNYSNINYTGLAKILKKYDKRTGGLLRLPFIQKVLEQPFF 169

Query: 109 TTDLLYKLVKECETMLDYLFPAIDLAASGETTPQAEVFDPSTSTTTKSDGLLIPKELAEI 168
           TTDL+ KLVKECET++D +FP  + A   +            +     +G+         
Sbjct: 170 TTDLISKLVKECETIIDAVFPVEEEAERAKEA--------KEAIVVAGEGIF-------- 213

Query: 169 EYMESLYMKSTVSALNVLQEIRSGSSTVSMFSLPPLQL 206
                   ++TV+AL  +QE+R GSST S FSLPPL L
Sbjct: 214 --------RNTVAALLTMQEMRKGSSTQSAFSLPPLSL 243


>Medtr8g077020.1 | SPX domain protein | HC | chr8:32695837-32699232
           | 20130731
          Length = 307

 Score =  144 bits (362), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 85/211 (40%), Positives = 124/211 (58%), Gaps = 20/211 (9%)

Query: 8   FRNLLENELDXXXXXXXXXXXXYIIRLKELQDRVAKVKASS-------------EQMMKI 54
           F  +L  EL+            ++IR +EL++R+ ++K  S             E+MM I
Sbjct: 66  FLRILNQELEKFNDFYVDKEEEFVIRFQELKERIERLKEKSSQSEKYTSDCEFSEEMMDI 125

Query: 55  RKEIVDFHGEMVLLENYSALNYTGLVKILKKYDKRTGALIRLPFIQKVLQQPFFTTDLLY 114
           RK++V  HGEMVLL+NYS+LN+ GL+KILKKYDKRTG L++LPF Q VL+QPFFTT+ L 
Sbjct: 126 RKDLVTIHGEMVLLKNYSSLNFAGLIKILKKYDKRTGGLLQLPFTQIVLRQPFFTTEPLT 185

Query: 115 KLVKECETMLDYLFPAIDLAASGETTPQAEVFDPSTSTTTKSDGLLIPKELAEI-EYMES 173
           +LV ECE  L+ LFP  +        P+ E   PS   TT +    +P+  + + E    
Sbjct: 186 RLVHECEENLELLFPLQEEVIQSTPHPEHES-RPSVDNTTNT----VPETSSTLGEETVH 240

Query: 174 LYMKSTVSALNVLQEIRSGSSTVSMFSLPPL 204
           LY +ST++A+  ++ ++  SST + FS   L
Sbjct: 241 LY-RSTLAAMRAIKGLQKASSTCNPFSFSSL 270


>Medtr0262s0060.1 | SPX domain protein | HC |
           scaffold0262:17184-15322 | 20130731
          Length = 219

 Score =  111 bits (278), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 70/174 (40%), Positives = 94/174 (54%), Gaps = 23/174 (13%)

Query: 4   EETDFRNLLENELDXXXXXXXXXXXXYIIRLKELQDRVAKV--------KASSE----QM 51
           EE +F  LL NE+D            +IIR KEL+  + +           SSE    +M
Sbjct: 41  EEAEFICLLNNEIDKFNDFFIEKEEEFIIRYKELEQNIKRAISLRGTNGSHSSETDYMEM 100

Query: 52  MK-IRKEIVDFHGEMVLLENYSALNYTGLVKILKKYDKRTGALIRLPFIQKVLQQPFFTT 110
           M  + K IVD HGEMVL       N+ GLVKILKKYD++TG L RLPF+QK+L+ PF +T
Sbjct: 101 MNTLTKYIVDLHGEMVL-------NFEGLVKILKKYDRKTGGLRRLPFLQKILEHPFLST 153

Query: 111 DLLYKLVKECETMLDYLFPAIDLAASGETTPQAEVFDPSTSTTTKSDGLLIPKE 164
           DL+ +LV+ECE ++D  + A     + E      VFD   S     + LL  +E
Sbjct: 154 DLISELVRECENIIDEAYQA---GEAAERVNAKAVFDGKGSLERIVEALLKKQE 204