Miyakogusa Predicted Gene

Lj4g3v1879160.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1879160.1 tr|B8BQR9|B8BQR9_THAPS Predicted protein
OS=Thalassiosira pseudonana GN=THAPSDRAFT_1376 PE=4
SV=1,38.73,0.000000000000001,DUF3119,Protein of unknown function
DUF3119; seg,NULL,CUFF.49788.1
         (215 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g114410.1 | DUF3119 family protein | HC | chr4:47039689-47...   322   1e-88
Medtr4g114410.2 | DUF3119 family protein | HC | chr4:47039689-47...   322   1e-88
Medtr4g114410.3 | DUF3119 family protein | HC | chr4:47039689-47...   322   1e-88

>Medtr4g114410.1 | DUF3119 family protein | HC |
           chr4:47039689-47036633 | 20130731
          Length = 224

 Score =  322 bits (826), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 158/204 (77%), Positives = 172/204 (84%), Gaps = 1/204 (0%)

Query: 12  LLSQRREKIGCLSGFRTSICGGQVVFSPNFSGRQISGSNGNRFVVNSLLGFGKRVKTKSR 71
           L SQRRE IG LSGF+ S+ GG V+F+PNFSGRQ++GS+GNRFVVNSL G G++VK    
Sbjct: 22  LPSQRRENIGYLSGFKYSLSGG-VLFNPNFSGRQLTGSHGNRFVVNSLFGIGRKVKKSIV 80

Query: 72  RETVIPEPDYRIPIVLLGIAGGLVYTDNXXXXXXXXXXXXXXXFQTTRVRFVFDDEALEV 131
           RETVIPEPDYRIP+VLLGIAGGLVYTDN                Q TRVRFVFDDE+LEV
Sbjct: 81  RETVIPEPDYRIPVVLLGIAGGLVYTDNLVPAVPVGLLGLLLLVQATRVRFVFDDESLEV 140

Query: 132 KVGDQLEESGENAFVGGKNRWNYSTFVNWEFWWPNFPILVYFKETQTKPEGQIHFFPIIF 191
           K+GDQL+ESGENAFVGGKNRW YSTFVNWEFWWPNFPILVYFKETQTKPEGQIHFFPIIF
Sbjct: 141 KIGDQLDESGENAFVGGKNRWKYSTFVNWEFWWPNFPILVYFKETQTKPEGQIHFFPIIF 200

Query: 192 NGKQLYDIMVERAGPSKNSGPRES 215
           NGKQLYDIMVERAGPSK S P+ES
Sbjct: 201 NGKQLYDIMVERAGPSKTSAPKES 224


>Medtr4g114410.2 | DUF3119 family protein | HC |
           chr4:47039689-47036633 | 20130731
          Length = 224

 Score =  322 bits (826), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 158/204 (77%), Positives = 172/204 (84%), Gaps = 1/204 (0%)

Query: 12  LLSQRREKIGCLSGFRTSICGGQVVFSPNFSGRQISGSNGNRFVVNSLLGFGKRVKTKSR 71
           L SQRRE IG LSGF+ S+ GG V+F+PNFSGRQ++GS+GNRFVVNSL G G++VK    
Sbjct: 22  LPSQRRENIGYLSGFKYSLSGG-VLFNPNFSGRQLTGSHGNRFVVNSLFGIGRKVKKSIV 80

Query: 72  RETVIPEPDYRIPIVLLGIAGGLVYTDNXXXXXXXXXXXXXXXFQTTRVRFVFDDEALEV 131
           RETVIPEPDYRIP+VLLGIAGGLVYTDN                Q TRVRFVFDDE+LEV
Sbjct: 81  RETVIPEPDYRIPVVLLGIAGGLVYTDNLVPAVPVGLLGLLLLVQATRVRFVFDDESLEV 140

Query: 132 KVGDQLEESGENAFVGGKNRWNYSTFVNWEFWWPNFPILVYFKETQTKPEGQIHFFPIIF 191
           K+GDQL+ESGENAFVGGKNRW YSTFVNWEFWWPNFPILVYFKETQTKPEGQIHFFPIIF
Sbjct: 141 KIGDQLDESGENAFVGGKNRWKYSTFVNWEFWWPNFPILVYFKETQTKPEGQIHFFPIIF 200

Query: 192 NGKQLYDIMVERAGPSKNSGPRES 215
           NGKQLYDIMVERAGPSK S P+ES
Sbjct: 201 NGKQLYDIMVERAGPSKTSAPKES 224


>Medtr4g114410.3 | DUF3119 family protein | HC |
           chr4:47039689-47036633 | 20130731
          Length = 224

 Score =  322 bits (826), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 158/204 (77%), Positives = 172/204 (84%), Gaps = 1/204 (0%)

Query: 12  LLSQRREKIGCLSGFRTSICGGQVVFSPNFSGRQISGSNGNRFVVNSLLGFGKRVKTKSR 71
           L SQRRE IG LSGF+ S+ GG V+F+PNFSGRQ++GS+GNRFVVNSL G G++VK    
Sbjct: 22  LPSQRRENIGYLSGFKYSLSGG-VLFNPNFSGRQLTGSHGNRFVVNSLFGIGRKVKKSIV 80

Query: 72  RETVIPEPDYRIPIVLLGIAGGLVYTDNXXXXXXXXXXXXXXXFQTTRVRFVFDDEALEV 131
           RETVIPEPDYRIP+VLLGIAGGLVYTDN                Q TRVRFVFDDE+LEV
Sbjct: 81  RETVIPEPDYRIPVVLLGIAGGLVYTDNLVPAVPVGLLGLLLLVQATRVRFVFDDESLEV 140

Query: 132 KVGDQLEESGENAFVGGKNRWNYSTFVNWEFWWPNFPILVYFKETQTKPEGQIHFFPIIF 191
           K+GDQL+ESGENAFVGGKNRW YSTFVNWEFWWPNFPILVYFKETQTKPEGQIHFFPIIF
Sbjct: 141 KIGDQLDESGENAFVGGKNRWKYSTFVNWEFWWPNFPILVYFKETQTKPEGQIHFFPIIF 200

Query: 192 NGKQLYDIMVERAGPSKNSGPRES 215
           NGKQLYDIMVERAGPSK S P+ES
Sbjct: 201 NGKQLYDIMVERAGPSKTSAPKES 224