Miyakogusa Predicted Gene

Lj4g3v1876790.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1876790.1 tr|G7JE32|G7JE32_MEDTR Ein3-binding f-box protein
OS=Medicago truncatula GN=MTR_4g114640 PE=4 SV=1,62.5,0.000000002,zinc
finger,Zinc finger, CCCH-type; no description,NULL; seg,NULL;
zf-CCCH,Zinc finger, CCCH-type; S,CUFF.49775.1
         (508 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g114040.1 | nucleic acid-binding protein, putative | LC | ...   363   e-100
Medtr4g114643.1 | hypothetical protein | HC | chr4:47166221-4716...   240   2e-63

>Medtr4g114040.1 | nucleic acid-binding protein, putative | LC |
           chr4:46926850-46930364 | 20130731
          Length = 594

 Score =  363 bits (932), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 228/410 (55%), Positives = 266/410 (64%), Gaps = 31/410 (7%)

Query: 113 SAKPVKNDNGSTTSTLKLENKTSSGNKTGVAS-TPSETHVDQSLTASKASSDFKLQPKED 171
           S KP+KNDNGS      LEN T+SGNKT VAS TP +T         KA S+ K QPKED
Sbjct: 195 SMKPLKNDNGSINKP-NLENGTASGNKTSVASSTPRDT------ITRKALSNIKPQPKED 247

Query: 172 PQLPLPENVGQKGDCLELSALDCKAASVTGSDSLLPDDGFVRKTSDLHTEESSEEQVNSH 231
            QLPLPENV Q+GDC ++S+LD K A VT SDS LP+DGF    S   TE+SSEEQ NS 
Sbjct: 248 LQLPLPENVKQQGDCFKISSLDYKEAVVTRSDSPLPEDGFAHNMSPSCTEQSSEEQENSQ 307

Query: 232 IEPEERWESSPGFDVLVQDES-EILGYEDDSEYLPVLDMDDQGLNEQYSGYEFKDPAEYD 290
           +EPEER  SSPGFDVLV DES   LGYE  SEYLPVLDMDD  LNEQY GYEFK+  +YD
Sbjct: 308 VEPEER--SSPGFDVLVHDESGNNLGYEGGSEYLPVLDMDDHELNEQYLGYEFKNTNDYD 365

Query: 291 TMCPDDDILYEQGTNDVYRCFDRDFMYANGGKNHAYTREIILDSIFSRKRIHIS------ 344
           TMC   DILYE+ T D YRCFDRDF   +  K   Y RE++LD+IFSRKRI +S      
Sbjct: 366 TMCSGADILYERKTYDDYRCFDRDFTSPSERKVCGYPREMVLDTIFSRKRIRMSTSEMAA 425

Query: 345 ------DLRDHLRGRREINGPPGTDFLRRDE-SPLMFQNQERHQRRSIHQRLSRRLTSEL 397
                 DLR HLR RRE+N PP T  LRR E S LM QN+ER   + I Q+ +RRLTS++
Sbjct: 426 CDYSDLDLRHHLRRRREVNSPPDTGLLRRHESSSLMVQNRERRHSQDIGQQQNRRLTSQV 485

Query: 398 GFSTIDSTGQVEALSIANKHGAFRHSQQHRPRKHYRE---KQQFPXXXXXXXXXXXXXXF 454
           GFS+I    +VE LSIANK   FR  QQ RPRKHYRE   K+ FP               
Sbjct: 486 GFSSI---REVEDLSIANKQRLFRPYQQSRPRKHYREKPAKRPFPSSKESRKPIVKQQRS 542

Query: 455 VQESTAFSGPKTLXXXXXXXXXXXXGSLHCESTSSGFENPEPLSEIVKGK 504
           +Q+S AFSGPKTL             S HCES+S+GF++P+PL EI+K +
Sbjct: 543 IQKSNAFSGPKTLAEIKEEKKKSGESS-HCESSSAGFQDPKPLHEILKDR 591



 Score =  230 bits (587), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 99/122 (81%), Positives = 109/122 (89%), Gaps = 2/122 (1%)

Query: 1   MDEDLLKRNTDCVYFLASPLTCKKGAECEYRHNEVARLNPRDCWYWLSGSCLNPTCAFRH 60
           MDED  KRNTDCVYFLASPLTCKKG ECEYRH+E+ARLNPRDCWYWLSG+CLNPTCAFRH
Sbjct: 1   MDEDFQKRNTDCVYFLASPLTCKKGVECEYRHHEIARLNPRDCWYWLSGNCLNPTCAFRH 60

Query: 61  PPLDGHTGGPSEPAKSSLPPY--KTMVPCYYFYNGFCNKGDRCSFLHGPDDSFLSAKPVK 118
           PP+DGHTG PSEP +SSLP    KTMV CY+F+NGFCNKG +CSFLHGPDDS L+ KP+K
Sbjct: 61  PPVDGHTGVPSEPTQSSLPATANKTMVTCYFFFNGFCNKGSKCSFLHGPDDSSLTVKPLK 120

Query: 119 ND 120
           ND
Sbjct: 121 ND 122


>Medtr4g114643.1 | hypothetical protein | HC |
           chr4:47166221-47167664 | 20130731
          Length = 278

 Score =  240 bits (613), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 138/260 (53%), Positives = 163/260 (62%), Gaps = 20/260 (7%)

Query: 261 SEYLPVLDMDDQGLNEQYSGYEFKDPAEYDTMCPDDDILYEQGTNDVYRCFDRDFMYANG 320
           SEYLPVLDMDD  LNEQY GYEFK+  +YDTMC   DILYE+ T D YR FDRDF   + 
Sbjct: 20  SEYLPVLDMDDHELNEQYLGYEFKNTNDYDTMCSGADILYERKTYDDYRRFDRDFTSPSE 79

Query: 321 GKNHAYTREIILDSIFSRKRIHIS------------DLRDHLRGRREINGPPGTDFLRRD 368
            K   Y RE++LD+IFSRK I +S            DLR HLR  RE+N PP T  LRR 
Sbjct: 80  RKVCGYPREMVLDTIFSRKSIRMSTSEMAACDYSDLDLRHHLRRHREVNSPPDTGLLRRH 139

Query: 369 E-SPLMFQNQERHQRRSIHQRLSRRLTSELGFSTIDSTGQVEALSIANKHGAFRHSQQHR 427
           E S LM QN+ERHQR+ I QR +RRLTS++GFS+I    +VE LSIANK   FR  QQ R
Sbjct: 140 ESSSLMVQNRERHQRQDIGQRQNRRLTSQVGFSSI---REVEDLSIANKRRLFRPYQQSR 196

Query: 428 PRKHYREKQQ---FPXXXXXXXXXXXXXXFVQESTAFSGPKTLXXXXXXXXXXXXGSLHC 484
           PRKHYREK     FP               +Q+S AFSGPKTL             S HC
Sbjct: 197 PRKHYREKPAKWPFPSSKESRKPIVKQQRSIQKSNAFSGPKTLAEIKEEKKKSGESS-HC 255

Query: 485 ESTSSGFENPEPLSEIVKGK 504
           ES+S+GF++P+PL EI+K +
Sbjct: 256 ESSSAGFQDPKPLHEILKDR 275