Miyakogusa Predicted Gene

Lj4g3v1845700.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1845700.1 Non Characterized Hit- tr|I1K1E2|I1K1E2_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,74.29,0.00002,seg,NULL,CUFF.49768.1
         (448 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g113740.1 | transmembrane protein, putative | HC | chr4:46...   514   e-146

>Medtr4g113740.1 | transmembrane protein, putative | HC |
           chr4:46812595-46809774 | 20130731
          Length = 734

 Score =  514 bits (1325), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 263/442 (59%), Positives = 330/442 (74%), Gaps = 6/442 (1%)

Query: 1   MNFVISKNPVNLLNYHSPCSLLRFHVPS-LLRSSTTKWTRGSETLRLRASCASSTSAGCY 59
           MNFVI+KNP+NL N HSP    RF  PS LL +S TKWT G+ TL L+A+ AS+++   Y
Sbjct: 1   MNFVIAKNPINLFNSHSPYFHDRFRNPSFLLHNSITKWTCGTNTLTLKATSASTST--VY 58

Query: 60  GGWDDLSGSEAPGEFDTLRDFLVSIGIDDRKHVFVFLLGLVCAMAISRVKVSTFXXXXXX 119
           GGWD+L+ SEA GEFD+LR+FLVS+GIDDRK+ FVF LG+VCAMAISRV+VST       
Sbjct: 59  GGWDELASSEASGEFDSLRNFLVSVGIDDRKNAFVFFLGIVCAMAISRVRVSTVLILPAS 118

Query: 120 XXXXXXGFAAGSFQNG--TFGEVRVSGSXXXXXXXXXXXXXXXXXXRSVDEFFDEIDLVI 177
                 G++ G  +NG  +FGE+++SGS                  +S+ EF DEID+V+
Sbjct: 119 AMVFALGYSVGFLRNGNFSFGELKLSGSGSSKRKEKDENLNSSEKLKSLSEFLDEIDVVV 178

Query: 178 GNLKSDVQSAIRNKKIQVDDLCGYVEVTDRIKLSALNARNIVKTLIDDEEKANGALVENH 237
            + K D+++AI NKKI++DDL GYVEV+D+IKL  LN RN+VK+L+D+EEK N  LVEN 
Sbjct: 179 SDFKIDLENAINNKKIKMDDLYGYVEVSDKIKLLNLNGRNVVKSLVDNEEKFNCVLVENQ 238

Query: 238 KSGRRKKQVGEAGYQMLKSISSLFGDDLRSSNSTKVRENVDRELDQTKGNGGVPPVEDRT 297
           KSGRRKKQVGE GYQML+SI SLF ++LRSSNSTK+RE+V+R+LDQT+GNG +PP ED+ 
Sbjct: 239 KSGRRKKQVGEVGYQMLQSIGSLFQENLRSSNSTKLRESVERQLDQTRGNGALPPGEDKP 298

Query: 298 LNLVDD-SKANGKLGSSQDLVTDSVLGMGRYGRMKNNPEIESFDLGDNRRSTNKFPGENK 356
           LNLVDD SK NGKL  SQD +T+SVL M R GR+  N + E+F +GDNRRS  KFP   +
Sbjct: 299 LNLVDDSSKLNGKLDCSQDSLTNSVLDMDRNGRIGTNSDRENFGVGDNRRSAAKFPEREE 358

Query: 357 YSYPNKGLRFTNNHSFSLKMDSSSTTDMWESRDNVLDSEGFKVRMKHMESESSYMRKELL 416
           YSY NKGLRFTNNHS SLKMDSSS  DMWES ++ LDSE  KVRMK +ESE+S++ ++LL
Sbjct: 359 YSYRNKGLRFTNNHSISLKMDSSSVADMWESHESRLDSESIKVRMKRVESETSFLHEQLL 418

Query: 417 DQSHETFRSSHDKRESMSDRSR 438
           +Q  E FRSS DKR+S  DRSR
Sbjct: 419 NQGQEAFRSSIDKRDSGPDRSR 440