Miyakogusa Predicted Gene

Lj4g3v1789220.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1789220.1 Non Characterized Hit- tr|I1MUE6|I1MUE6_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,77.19,0,DUF92,Protein
of unknown function DUF92, TMEM19; SUBFAMILY NOT NAMED,NULL; FAMILY
NOT NAMED,Protein ,CUFF.49725.1
         (290 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g112990.1 | integral membrane family protein | HC | chr4:4...   348   3e-96

>Medtr4g112990.1 | integral membrane family protein | HC |
           chr4:46425637-46422756 | 20130731
          Length = 290

 Score =  348 bits (893), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 182/290 (62%), Positives = 213/290 (73%)

Query: 1   MEFSPPPWFQPSFAVAISFLIAFRAHRKKSLDTSGALAGFIVMSIHFFAGYRFGAMLLAF 60
           M+ S   W +P  AV +  LIAFRAHRK SL TSGA+AGF VMS+H F G+RF AM+ AF
Sbjct: 1   MDPSFSQWIRPLVAVTVGSLIAFRAHRKNSLSTSGAIAGFFVMSLHVFVGFRFAAMIFAF 60

Query: 61  FFSSSKLTKLGEDIKRVVDPEFKEGGQRNWLQVLSNSGIASVLVVYIWVLTQGQDMCLNS 120
           FF+SS LTK G+D KR++DPEFK+GGQRNW+QVL+NSGIASVL+V +WVLT+G+D C+NS
Sbjct: 61  FFTSSALTKKGQDTKRLIDPEFKQGGQRNWIQVLANSGIASVLIVALWVLTEGKDQCMNS 120

Query: 121 KDSPHVTYLIGAVIGHYSCCNGDTWSSELGILSDDRPRLITTFKRVRRGINGAVTKTXXX 180
           KDS  +T LIG VIGHY CCNGDTWSSELG+LS+DRPRLITTFK VR+G NG VTKT   
Sbjct: 121 KDSALITALIGGVIGHYCCCNGDTWSSELGVLSNDRPRLITTFKPVRKGTNGGVTKTGLL 180

Query: 181 XXXXXXFVIGLSFVLMGLLTASCEPDLVLKQLLVIPIATVAGLLGSVIDSLLGATLQFTG 240
                  VIG+S+VL+ LLT  C  D VLKQLLVIP+ TVAGL GS+IDSLLGATLQF+G
Sbjct: 181 AAAAGGSVIGVSYVLLELLTIRCGSDRVLKQLLVIPLTTVAGLCGSIIDSLLGATLQFSG 240

Query: 241 FCSLRQXXXXXXXXXXXXISGVDILDNNAXXXXXXXXXXXXXXXACYYIF 290
           FCS+RQ            ISG+ ILDNNA               AC YIF
Sbjct: 241 FCSIRQKVVGNPGTTVKRISGLSILDNNAVNFVSILLTTILTSIACLYIF 290