Miyakogusa Predicted Gene
- Lj4g3v1787050.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v1787050.1 Non Characterized Hit- tr|I1MUG2|I1MUG2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.38175 PE,91.4,0,MUTS
HOMOLOG 2, MSH2,NULL; DNA MISMATCH REPAIR MUTS RELATED PROTEINS,NULL;
DNA repair protein MutS, ,CUFF.49716.1
(940 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g111945.1 | DNA mismatch repair MSH3-like protein | HC | c... 1713 0.0
Medtr7g109470.1 | DNA mismatch repair MSH3-like protein | HC | c... 202 2e-51
Medtr1g100683.2 | DNA mismatch repair MSH3-like protein | HC | c... 191 3e-48
Medtr1g100683.1 | DNA mismatch repair MSH3-like protein | HC | c... 191 3e-48
Medtr6g086270.1 | DNA mismatch repair protein msh6 | HC | chr6:3... 187 3e-47
Medtr5g093110.1 | DNA mismatch repair protein MutS | HC | chr5:4... 143 1e-33
Medtr1g045670.1 | DNA mismatch repair protein | HC | chr1:171673... 91 7e-18
Medtr5g068600.7 | DNA mismatch repair MUTS family protein | HC |... 82 2e-15
Medtr5g068600.6 | DNA mismatch repair MUTS family protein | HC |... 82 2e-15
Medtr5g068600.5 | DNA mismatch repair MUTS family protein | HC |... 82 2e-15
Medtr5g068600.2 | DNA mismatch repair MUTS family protein | HC |... 82 2e-15
Medtr5g068600.1 | DNA mismatch repair MUTS family protein | HC |... 82 2e-15
Medtr5g068600.4 | DNA mismatch repair MUTS family protein | HC |... 82 2e-15
Medtr5g068600.3 | DNA mismatch repair MUTS family protein | HC |... 82 2e-15
Medtr4g088920.1 | DNA mismatch repair protein MutS2 | HC | chr4:... 71 5e-12
>Medtr4g111945.1 | DNA mismatch repair MSH3-like protein | HC |
chr4:46289309-46300169 | 20130731
Length = 941
Score = 1713 bits (4436), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 831/941 (88%), Positives = 872/941 (92%), Gaps = 2/941 (0%)
Query: 1 MGEN--NFEDKLPELKLDSKQAQGFLSFFKTLTDDSRAIRFFDRRDYYTAHGENANFIAK 58
M EN F DKLPELKLDSKQAQGFLSFFKTL D RAIRFFDRRDYYTAHGENA FIAK
Sbjct: 1 MDENFDGFNDKLPELKLDSKQAQGFLSFFKTLPHDPRAIRFFDRRDYYTAHGENATFIAK 60
Query: 59 TYYHTTTALRQLGSGLDALSSVSVSRNMFETIARDLLLERTDHTLEVYEGSGSNWRLVKS 118
TYYHTTTALRQLGSG +ALSSVSVSRNMFETIARDLLLERTDHTLEVYEGS SNW+L KS
Sbjct: 61 TYYHTTTALRQLGSGSNALSSVSVSRNMFETIARDLLLERTDHTLEVYEGSSSNWQLAKS 120
Query: 119 GTPGNIGNFEDVLFANSEMQDSPVIVALSLNFRENGCTIGLGFVDLTKRVLGMAEFLDDS 178
GTPGNIG+FEDVLFANSEMQDSP +VALSLNFRENGCTIGLGFVDLTKR+LGMAEFLDDS
Sbjct: 121 GTPGNIGSFEDVLFANSEMQDSPAVVALSLNFRENGCTIGLGFVDLTKRLLGMAEFLDDS 180
Query: 179 HFTNVESALVALGCKECLVPIESGKSTENRMLCDVLTKCGAMLTERKKSEFKTRDLVQDL 238
HFTNVESALV LGCKECLVPIE GKS E +MLCDVLTKCG MLTERKKSEFKTRDLVQDL
Sbjct: 181 HFTNVESALVGLGCKECLVPIERGKSIEYKMLCDVLTKCGVMLTERKKSEFKTRDLVQDL 240
Query: 239 GRLLKGSIEPVRDLVSGFEFAPGALGALLSYAELLADESNYENFTLRRYNLDSYVRLDSA 298
GRL+KGSIE V+DLVSGFEFAPGALGALLSYAELLADESNYEN+TLRRYNLDSY+RLDSA
Sbjct: 241 GRLVKGSIEAVQDLVSGFEFAPGALGALLSYAELLADESNYENYTLRRYNLDSYMRLDSA 300
Query: 299 AMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHNWLKQPLLDVKEINSRLDVVQA 358
AMRALN+LESKTDANKNFSLFGLMNRTCTAGMGKRLLH WLKQPLLDV +INSRLDVVQA
Sbjct: 301 AMRALNILESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNDINSRLDVVQA 360
Query: 359 FVEDPVLRQELRQHLKRISDIERLVHNLQKRRAGLQHIVKLYQSSIRLPYIKSTLEAYDG 418
FVED VLRQ+LRQHLKRISDIERLVHNLQK +AGLQH+VKLYQSSIRLPYIKS L+ YDG
Sbjct: 361 FVEDTVLRQDLRQHLKRISDIERLVHNLQKGKAGLQHVVKLYQSSIRLPYIKSALDRYDG 420
Query: 419 QFSSMMKSRYLEPLQLWTDDDHLNKFIGLVEASVDLDQLENREYMIAPSYDAXXXXXXXX 478
QFSSMMKSRYL+ L+L T D LNKFI LVE VDLD LEN EYMI+ SYD
Sbjct: 421 QFSSMMKSRYLKDLELLTGADRLNKFIELVEICVDLDHLENGEYMISSSYDTTLTGLKEQ 480
Query: 479 XXXXXSQIQNLHRQTADDLDLPIDKALKLDKGTQFGHVFRITKKEEPKIRKKLNTQFIVL 538
SQI +LH+QTA DLDLP+DKALKLDKGTQFGHVFRITKKEEPKIR KLNTQFIVL
Sbjct: 481 QELLESQIHDLHKQTAIDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRTKLNTQFIVL 540
Query: 539 ETRKDGVKFTNTKLKKLGDQYQQILEEYKSCQKELVNRVVQTAATFSEVFESLAELISEL 598
ETRKDGVKFTNTKLKKLGD+YQQILEEYKS QK+LV +VV +A+FSEVFESLAELISEL
Sbjct: 541 ETRKDGVKFTNTKLKKLGDKYQQILEEYKSYQKQLVVKVVGISASFSEVFESLAELISEL 600
Query: 599 DVLLSFADLASSCPTPYTRPDITSSDEGDIILEGSRHPCVEAQDWVNFIPNDCKLIRRKS 658
DVLLSFADLASSCPTPYTRPDITSSDEGDIILEGSRHPCVEAQDWVNFIPNDCKLIR KS
Sbjct: 601 DVLLSFADLASSCPTPYTRPDITSSDEGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKS 660
Query: 659 WFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDKASISVRDCIFARVGAGDCQLRGV 718
WFQIITGPNMGGKSTFIRQVGVNILMAQVG FVPCDKASISVRDCIFARVGAGDCQLRGV
Sbjct: 661 WFQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGV 720
Query: 719 STFMQEMLETASILKGATDKSLIIIDELGRGTSTYDGFGLAWAICEHIVEVIKAPTLFAT 778
STFMQEMLET+SILKGATDKSLIIIDELGRGTSTYDGFGLAWAICEHIV+VIKAPTLFAT
Sbjct: 721 STFMQEMLETSSILKGATDKSLIIIDELGRGTSTYDGFGLAWAICEHIVDVIKAPTLFAT 780
Query: 779 HFHELTALALENVSDDPHKQIVGVANYHVSAHIDESTRKLTMLYKVEPGACDQSFGIHVA 838
HFHELTALA EN S+D HKQIVGVANYHVSAHID STRKLTMLYKVEPGACDQSFGIHVA
Sbjct: 781 HFHELTALADENGSNDTHKQIVGVANYHVSAHIDASTRKLTMLYKVEPGACDQSFGIHVA 840
Query: 839 EFANFPESVVALAREKAAELEDFSPSAISLIDTTEQAGSKRKRVFESDDMSQGVAKARQI 898
EFANFPESVVALAREKAAELEDFSPSA+SL+++TE+ GSKRKRVFE+D+MS+G KARQI
Sbjct: 841 EFANFPESVVALAREKAAELEDFSPSALSLMESTEEVGSKRKRVFEADEMSKGAVKARQI 900
Query: 899 LEAFVALPLETMDKSQALQEVSKLKDTLEKDAENCHWLQKF 939
LEAFVALPLETMDK+QA QEV KLKD LEKDA++CHWLQKF
Sbjct: 901 LEAFVALPLETMDKTQAWQEVRKLKDNLEKDAQHCHWLQKF 941
>Medtr7g109470.1 | DNA mismatch repair MSH3-like protein | HC |
chr7:44767037-44759016 | 20130731
Length = 1280
Score = 202 bits (513), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 175/599 (29%), Positives = 287/599 (47%), Gaps = 52/599 (8%)
Query: 292 YVRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHNWLKQPLLDVKEINS 351
Y+ LD+ A+ L + E+ + + +L+ +N+ C GKRLL +WL +PL V+ I
Sbjct: 643 YMVLDAVALENLEIFENSRNGESSGTLYAQLNQ-CVTAFGKRLLKSWLARPLYHVESIKE 701
Query: 352 RLDVVQAF--VEDPVLRQELRQHLKRISDIERLVHN-LQKRRAGLQHIVK--LYQSSIR- 405
R + V V P E R+ L ++ D+ERL+ L R A ++ K LY+ S +
Sbjct: 702 RQEAVAGLKGVNLPHT-LEFRKALSKLPDMERLLARVLSSRDASGRNANKVVLYEDSSKK 760
Query: 406 -LPYIKSTLEAYD---------GQFSSMMKSRYLEPLQLWTDDDHLNKFIGLVEASVDLD 455
L S L + G + +KSR L L L GL + S+DL+
Sbjct: 761 QLQEFISALRGLELMAQACLSLGVILNNVKSRQLSHL--------LTPGKGLPDVSMDLN 812
Query: 456 QLENREYMIAPSYDAXXXXXXXXXXXXXSQIQNLHRQTADDLDLPIDKALKLDKGTQFGH 515
++ + + S + ++ + LD + + KL T +
Sbjct: 813 HFKDAFDWVEANNSGRIIPHEGVDKEYDSAGKAVNEIESSLLDH-LKEQRKLLGSTSISY 871
Query: 516 VFRITKK----EEPK-IRKKLNTQFIVLETRKDGVKFTNTKLKKLGDQYQQILEEYKSCQ 570
V I K E P+ + + + + ++K V++ +K + E ++
Sbjct: 872 V-GIGKDTYLLEVPENLSQNIPRDYERRSSKKGFVRYWTPDIKIFLKELSHAESERETLL 930
Query: 571 KELVNRVVQTAATFSEVFESLAELISELDVLLSFADLASSCPTPYTRPDITSS---DEGD 627
K R+++ ++ L +ELDVL++ A + P RP + +E
Sbjct: 931 KSTFQRMIERFCEHHTQWKQLVSATAELDVLINLAIASDYYEGPTCRPSFVGTLCTNEAP 990
Query: 628 IILEGS-RHPCVEAQDWVN--FIPNDCKLI-RRKSWFQIITGPNMGGKSTFIRQVGVNIL 683
I S HP + + F+PND + ++ F ++TGPNMGGKST +RQV + ++
Sbjct: 991 YIYAKSLGHPVLRSDTLGKSAFVPNDITIGGPDQASFILLTGPNMGGKSTLLRQVCLAVI 1050
Query: 684 MAQVGSFVPCDKASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDKSLIII 743
+AQVG+ VP + +S D IF R+GA D + G STF+ E+ ETA++L AT SL+ +
Sbjct: 1051 LAQVGADVPSESFELSPVDRIFVRMGARDNIMAGQSTFLTELSETATMLSSATRNSLVAL 1110
Query: 744 DELGRGTSTYDGFGLAWAICEHIVEVIKAPTLFATHFHELTALALENVSDDPHKQIVGVA 803
DELGRGTST DG +A ++ EH+V ++ LF+TH+H L L+ DP V
Sbjct: 1111 DELGRGTSTSDGQAIAESVLEHLVRSVQCRGLFSTHYHRLAIDYLK----DPK-----VC 1161
Query: 804 NYHVSAHI---DESTRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVALAREKAAELE 859
H++ + +E ++T LY++ GAC +S+G++VA A P SV+ A K+ E E
Sbjct: 1162 LAHMACQVGSGNEGLDEVTFLYRLSAGACPKSYGVNVARLAGLPTSVLQKADAKSREFE 1220
>Medtr1g100683.2 | DNA mismatch repair MSH3-like protein | HC |
chr1:45623820-45633367 | 20130731
Length = 1072
Score = 191 bits (486), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 111/288 (38%), Positives = 164/288 (56%), Gaps = 19/288 (6%)
Query: 588 FESLAELISELDVLLSFADLASSCPTPYTRPDITSSDEG-DIILEGSRHPCVEAQDWVNF 646
F++ + ++ LD L S A L+ + Y RP E + + RHP +E+ NF
Sbjct: 726 FQASVQALASLDCLHSLAILSRN--KGYVRPVFVDDHEPVQMQICSGRHPVLESILQNNF 783
Query: 647 IPNDCKLIRRKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDKASISVRDCIFA 706
+PND + + + QI+TGPNMGGKS ++RQ + LMAQVGSFVP A + V D I+
Sbjct: 784 VPNDTSMHADREYCQIVTGPNMGGKSCYVRQASLIALMAQVGSFVPASSAKLHVLDGIYT 843
Query: 707 RVGAGDCQLRGVSTFMQEMLETASILKGATDKSLIIIDELGRGTSTYDGFGLAWAICEHI 766
R+GA D +G STF++E+ ET+ IL T +SL+I+DELGRGTST+DG +A+A ++
Sbjct: 844 RMGASDSIQQGRSTFLEELSETSHILHRCTGRSLVILDELGRGTSTHDGMAIAYATLHYL 903
Query: 767 VEVIKAPTLFATHFHELTALALENVSDDPHKQIVGVANYHVS---AHIDESTRK-----L 818
++ K+ LF TH+ ++ +L E VA YH+S +H D S +
Sbjct: 904 LKQKKSLVLFVTHYPKIASLETEFPGS--------VAAYHMSHLTSHDDVSKNSNDHEDI 955
Query: 819 TMLYKVEPGACDQSFGIHVAEFANFPESVVALAREKAAELEDFSPSAI 866
T LYK+ PG ++SFG VA+ A P ++ A A++LE S I
Sbjct: 956 TYLYKLVPGVSERSFGFKVAQLAQLPSHCISRAIVMASKLEALVNSRI 1003
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 103/224 (45%), Gaps = 20/224 (8%)
Query: 157 IGLGFVDLTKRVLGMAEFLDDSHFTNVESALVALGCKECLVPIESGKSTENRMLC----- 211
IG+ V+++ + EF D+ + +E+ +V+L E L+ K TE +L
Sbjct: 254 IGIVGVEISTGDVVYGEFDDNFLRSELEAVVVSLSPAELLLGDPLSKQTEKLLLAFAGPS 313
Query: 212 ----------DVLTKCGA---MLTERKKSEFKTRDLVQDLGRLLKGSIE-PVRDLVSGFE 257
D T GA ++T + + + D +Q+ GS + V+++++ E
Sbjct: 314 SNARVERASRDCFTNGGAFAEVMTLYENTHADSPDSMQNNELAELGSQQMVVKEVMNLPE 373
Query: 258 FAPGALGALLSYAELLADESNYENFTLRRYNLDSYVRLDSAAMRALNVLESKTDANKNFS 317
A AL + + + E + LR + ++ + L + ++ L VL++ +D + + S
Sbjct: 374 LAVEALALTIRHLKGFGFERILCSGALRPFVSNTEMTLSANTLQQLEVLQNNSDGSASGS 433
Query: 318 LFGLMNRTCTAGMGKRLLHNWLKQPLLDVKEINSRLDVVQAFVE 361
L +MN T T G RLL +W+ PL D I +RL+ V E
Sbjct: 434 LLQVMNHTLTI-FGSRLLKHWVSHPLCDQTLIAARLNAVSEIAE 476
>Medtr1g100683.1 | DNA mismatch repair MSH3-like protein | HC |
chr1:45623796-45633355 | 20130731
Length = 1072
Score = 191 bits (486), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 111/288 (38%), Positives = 164/288 (56%), Gaps = 19/288 (6%)
Query: 588 FESLAELISELDVLLSFADLASSCPTPYTRPDITSSDEG-DIILEGSRHPCVEAQDWVNF 646
F++ + ++ LD L S A L+ + Y RP E + + RHP +E+ NF
Sbjct: 726 FQASVQALASLDCLHSLAILSRN--KGYVRPVFVDDHEPVQMQICSGRHPVLESILQNNF 783
Query: 647 IPNDCKLIRRKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDKASISVRDCIFA 706
+PND + + + QI+TGPNMGGKS ++RQ + LMAQVGSFVP A + V D I+
Sbjct: 784 VPNDTSMHADREYCQIVTGPNMGGKSCYVRQASLIALMAQVGSFVPASSAKLHVLDGIYT 843
Query: 707 RVGAGDCQLRGVSTFMQEMLETASILKGATDKSLIIIDELGRGTSTYDGFGLAWAICEHI 766
R+GA D +G STF++E+ ET+ IL T +SL+I+DELGRGTST+DG +A+A ++
Sbjct: 844 RMGASDSIQQGRSTFLEELSETSHILHRCTGRSLVILDELGRGTSTHDGMAIAYATLHYL 903
Query: 767 VEVIKAPTLFATHFHELTALALENVSDDPHKQIVGVANYHVS---AHIDESTRK-----L 818
++ K+ LF TH+ ++ +L E VA YH+S +H D S +
Sbjct: 904 LKQKKSLVLFVTHYPKIASLETEFPGS--------VAAYHMSHLTSHDDVSKNSNDHEDI 955
Query: 819 TMLYKVEPGACDQSFGIHVAEFANFPESVVALAREKAAELEDFSPSAI 866
T LYK+ PG ++SFG VA+ A P ++ A A++LE S I
Sbjct: 956 TYLYKLVPGVSERSFGFKVAQLAQLPSHCISRAIVMASKLEALVNSRI 1003
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 103/224 (45%), Gaps = 20/224 (8%)
Query: 157 IGLGFVDLTKRVLGMAEFLDDSHFTNVESALVALGCKECLVPIESGKSTENRMLC----- 211
IG+ V+++ + EF D+ + +E+ +V+L E L+ K TE +L
Sbjct: 254 IGIVGVEISTGDVVYGEFDDNFLRSELEAVVVSLSPAELLLGDPLSKQTEKLLLAFAGPS 313
Query: 212 ----------DVLTKCGA---MLTERKKSEFKTRDLVQDLGRLLKGSIE-PVRDLVSGFE 257
D T GA ++T + + + D +Q+ GS + V+++++ E
Sbjct: 314 SNARVERASRDCFTNGGAFAEVMTLYENTHADSPDSMQNNELAELGSQQMVVKEVMNLPE 373
Query: 258 FAPGALGALLSYAELLADESNYENFTLRRYNLDSYVRLDSAAMRALNVLESKTDANKNFS 317
A AL + + + E + LR + ++ + L + ++ L VL++ +D + + S
Sbjct: 374 LAVEALALTIRHLKGFGFERILCSGALRPFVSNTEMTLSANTLQQLEVLQNNSDGSASGS 433
Query: 318 LFGLMNRTCTAGMGKRLLHNWLKQPLLDVKEINSRLDVVQAFVE 361
L +MN T T G RLL +W+ PL D I +RL+ V E
Sbjct: 434 LLQVMNHTLTI-FGSRLLKHWVSHPLCDQTLIAARLNAVSEIAE 476
>Medtr6g086270.1 | DNA mismatch repair protein msh6 | HC |
chr6:32387897-32378956 | 20130731
Length = 1155
Score = 187 bits (476), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 111/280 (39%), Positives = 162/280 (57%), Gaps = 20/280 (7%)
Query: 595 ISELDVLLSFADLAS-SCPTPYTRPDI------TSSDEGDIILE--GSRHPCVEAQDWVN 645
I+ +DVL SFA +S SC T +RP I TS D G +L+ G HP +
Sbjct: 819 INCIDVLRSFAVTSSFSCGT-MSRPVIVPTSKSTSKDSGAPVLKMKGLWHPFALGETGRE 877
Query: 646 FIPNDCKLIRRKSWFQ----IITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDKASISVR 701
+PND L + ++TGPNMGGKST +R + ++MAQ+G +VPC+ +SV
Sbjct: 878 PVPNDMILGENEGGHHPRTLLLTGPNMGGKSTLLRATCLAVIMAQLGCYVPCENCVLSVV 937
Query: 702 DCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDKSLIIIDELGRGTSTYDGFGLAWA 761
D IF R+GA D + G STF E ETAS+L AT SL+I+DELGRGTST+DG+ +A+A
Sbjct: 938 DIIFTRLGATDRIMAGESTFFIECTETASVLHNATQDSLVILDELGRGTSTFDGYAIAYA 997
Query: 762 ICEHIVEVIKAPTLFATHFHELTALALENVSDDPH--KQIVGVANYHVSAHIDESTRKLT 819
+ H++E + LFATH+H LT + + P Q + A S + + ++L
Sbjct: 998 VFRHLIEKVNCRLLFATHYHPLT----KEFASHPRVTMQHMACAFKSKSDTLSKQDQELV 1053
Query: 820 MLYKVEPGACDQSFGIHVAEFANFPESVVALAREKAAELE 859
LY++ PGAC +S+G+ VA A PE V +A + + +++
Sbjct: 1054 FLYRLAPGACPESYGLQVALMAGIPEKTVNVASKASQQMK 1093
Score = 80.5 bits (197), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 111/432 (25%), Positives = 179/432 (41%), Gaps = 69/432 (15%)
Query: 68 RQLG---SGLDALSSVSVSRNMFETIARDLLLERTDHTLEVYEGSGSNWRLVKSGTP--- 121
RQ+G SG+D V+R + R LE ++ S +LV+ TP
Sbjct: 375 RQVGISESGIDDAVKNLVARGY--KVGRVEQLETSEEAKARGANSVIQRKLVQVVTPSTN 432
Query: 122 --GNIGNFEDVLFANSEMQDSPVIVALSLNFRENG-CTIGLGFVDLTKRVLGMAEFLDDS 178
GNIG + L A E N +NG T G FVD + L + DD+
Sbjct: 433 VDGNIGPDANHLLAIKEES----------NGSDNGSVTYGFAFVDCARLRLWVGSIDDDA 482
Query: 179 HFTNVESALVALGCKECLVPIESGKSTENRMLCDVLTKCGAM---------LTERKKSEF 229
+ + + L+ + KE + G S E + G+ +T+ SE
Sbjct: 483 SCSALGALLMQVSPKEIIYE-RRGVSKEAEKAFRKFSLNGSTTLQLTPMRSITDLVTSEI 541
Query: 230 KTRDLVQDLGRLLKGSIEPVRDLVSGF---EFAPGALGALLSYAELLADESNYENFTLRR 286
DL+ G KGS + +++ E ALG L+ + L + +N +
Sbjct: 542 S--DLIHSKG-YFKGSSNSLDHVLTNVIHCEITLSALGGLIGHLNRLMLDEVLQNGDIYP 598
Query: 287 YNL-DSYVRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHNWLKQPLLD 345
Y + +++D L + + D K +L+ ++ C GKRLL NW+ PL D
Sbjct: 599 YQVYKGCLKMDGPTYINLEIFGNSNDGGKAGTLYKYLD-NCVTSSGKRLLRNWICCPLKD 657
Query: 346 VKEINSRLDVVQAFVEDPVLRQELRQHLKRISDIERLVHNLQKRRAGLQHIVKLYQSSIR 405
+ IN+RLDVV + PV+ + QHL+++ D+E L L + ++ L+ S I
Sbjct: 658 AEGINNRLDVVDHLIASPVIVSHIAQHLRKLPDLELL---LGRTKSSLK-----VSSPIL 709
Query: 406 LP-YIKSTLEAYDGQFSSMMKS-----------RYLEP----------LQLWTDDDHLNK 443
LP +K L+ F S++K + +P L + T D L++
Sbjct: 710 LPLLVKKILKQRVKVFGSLVKGLRTTLSLLLILQKEQPLISSLTKVFKLPVLTGSDGLDQ 769
Query: 444 FIGLVEASVDLD 455
F+ EA+VD D
Sbjct: 770 FLTQFEAAVDSD 781
>Medtr5g093110.1 | DNA mismatch repair protein MutS | HC |
chr5:40657110-40644297 | 20130731
Length = 810
Score = 143 bits (360), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/300 (33%), Positives = 150/300 (50%), Gaps = 19/300 (6%)
Query: 555 LGDQYQQILEEYKSCQKELVNRVVQTAATFSEVFESLAELISELDVLLSFADLASSCPTP 614
LGD Y +IL+ ++ ++L + V + FS +A +ELD LS A +A
Sbjct: 471 LGDIYHKILDMERAITRDLFSHV----SLFSTHLTKVATFAAELDCFLSMALVARQ--NN 524
Query: 615 YTRPDITSSDEGDIILEGSRHPCVEAQDWVNFIPNDCKLIRRKSWFQIITGPNMGGKSTF 674
Y RP +T + DI + RH ++ FIPND K I IITGPN GKS +
Sbjct: 525 YVRPVLTEENLLDI--KNGRH-VLQEMTVDTFIPNDTK-IFHDGRVNIITGPNFSGKSIY 580
Query: 675 IRQVGVNILMAQVGSFVPCDKASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKG 734
I+QV + + +A +GSFVP D A++ + D IF G+ STFM ++ + +L+
Sbjct: 581 IKQVAIIVFLAHIGSFVPADAATVGLTDRIFCATGS-RLMTAEQSTFMIDLHQIGMMLRH 639
Query: 735 ATDKSLIIIDELGRGTSTYDGFGLAWAICEHIVEVIKAPTLF-ATHFHELTALALENVSD 793
AT +SL ++DE G+GT T DG GL H + + P +F TH +L L S
Sbjct: 640 ATSRSLCLVDEFGKGTLTEDGIGLLAGAINHFITCDEPPKVFVCTHLMDL----LHGCSL 695
Query: 794 DPHKQIVGVANYHVSAHIDESTR--KLTMLYKVEPGACDQSFGIHVAEFANFPESVVALA 851
+QI + D+ST + LY++ PG S+G+H A A P+ ++ A
Sbjct: 696 TKSEQI-KFYTMSILRPEDDSTHIEDIVFLYRLVPGHVHHSYGLHCALLAGVPDEIIKRA 754
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 73/145 (50%), Gaps = 24/145 (16%)
Query: 283 TLRRYNLDSYVRLDSAAMRALNVLESKTD--------ANKNFSLFGLMNRTCTAGMGKRL 334
+L +L+++++LD+A+ AL + + A + FS+FG+MN+ C MG+RL
Sbjct: 175 SLAEISLNNFIKLDAASHEALQIFQIDKHPSHMGIGRAKEGFSVFGMMNK-CVTPMGRRL 233
Query: 335 LHNWLKQPLLDVKEINSRLDVVQAFVEDPVLRQELRQHLKRISDIERLVHN--------- 385
L W +P+LD++ +N RL+ + F L LR+ LK + DI L+
Sbjct: 234 LRQWFLRPILDLEVLNYRLNSISFFHSSEELVASLRETLKSVKDIPHLLKKFDSPSSICT 293
Query: 386 ------LQKRRAGLQHIVKLYQSSI 404
L K + L H+ K+++ I
Sbjct: 294 STDWAALLKSISALLHVNKIFEVGI 318
>Medtr1g045670.1 | DNA mismatch repair protein | HC |
chr1:17167339-17152759 | 20130731
Length = 1138
Score = 90.5 bits (223), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 113/251 (45%), Gaps = 30/251 (11%)
Query: 662 IITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDKASISVRDCIFARVGAGDCQLRGVSTF 721
++TGPN GGKS+ +R + L+ G VP + A I D I + + D S+F
Sbjct: 766 LLTGPNGGGKSSLLRSICAAALLGICGLMVPAESAVIPYFDSIMLHMKSYDSPADHKSSF 825
Query: 722 MQEMLETASILKGATDKSLIIIDELGRGTSTYDGFGLAWAICEHIVEVIKAPTLFATHFH 781
EM E SI+ G T +SL+++DE+ RGT T G +A +I E ++ + +TH H
Sbjct: 826 QVEMSELRSIIAGTTKRSLVLVDEICRGTETAKGTCIAGSIIE-TLDRSGCLGIVSTHLH 884
Query: 782 ELTALALENVSDDPHKQIVGVANYHVSAHIDESTRKLTMLYKVEPGACDQSFGIHVAEFA 841
++ L L N+++ HK + + ID T+ ML G C +S A+
Sbjct: 885 DIFTLPL-NITNTVHKAM-------GTTCIDGQTKPTWMLTD---GVCKESLAFETAKRE 933
Query: 842 NFPESVV--------------ALAREKAAELEDFSPSAISLIDTTEQAGSKRKRVFESDD 887
PE ++ L+ E A+ E+ S S I+ G+ F S
Sbjct: 934 GIPEIIIQRAEDLYLSVYAKKTLSAENYAKQEELS----SYINGNNSNGTHHSEKFLSRI 989
Query: 888 MSQGVAKARQI 898
+G++ A I
Sbjct: 990 SQEGISLANPI 1000
>Medtr5g068600.7 | DNA mismatch repair MUTS family protein | HC |
chr5:29049681-29066879 | 20130731
Length = 699
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 100/208 (48%), Gaps = 15/208 (7%)
Query: 647 IPNDCKLIRRKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFV-PCDKASISVRDCIF 705
+P D L+ K+ +ITGPN GGK+ ++ VG+ +MA+ G +V + I D +F
Sbjct: 318 VPVDF-LVSNKTRVIVITGPNTGGKTICLKTVGLAAMMAKSGLYVLASESVQIPWFDSVF 376
Query: 706 ARVGAGDCQLRGVSTFMQEMLETASILKGATDKSLIIIDELGRGTSTYDGFGLAWAICEH 765
A +G + +STF + + ++I +T +SL+++DE+G GT+ +G L ++ E
Sbjct: 377 ADIGDEQSLSQSLSTFSGHLKQISNIKLQSTRQSLVLLDEVGAGTNPLEGAALGMSLLES 436
Query: 766 IVEVIKAPTLFATHFHELTALALENVSDDPHKQIVGVANYHVSAHIDESTRKLTMLYKVE 825
+ T+ TH EL L N A + DE K T YKV
Sbjct: 437 LAHGGCLLTIATTHHGELKTLKYSN-----------EAFENACMEFDEVNLKPT--YKVL 483
Query: 826 PGACDQSFGIHVAEFANFPESVVALARE 853
G +S I++AE P V+ AR+
Sbjct: 484 WGIPGRSNAINIAERLGLPSVVIDAARK 511
>Medtr5g068600.6 | DNA mismatch repair MUTS family protein | HC |
chr5:29054350-29066879 | 20130731
Length = 799
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 100/208 (48%), Gaps = 15/208 (7%)
Query: 647 IPNDCKLIRRKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFV-PCDKASISVRDCIF 705
+P D L+ K+ +ITGPN GGK+ ++ VG+ +MA+ G +V + I D +F
Sbjct: 418 VPVDF-LVSNKTRVIVITGPNTGGKTICLKTVGLAAMMAKSGLYVLASESVQIPWFDSVF 476
Query: 706 ARVGAGDCQLRGVSTFMQEMLETASILKGATDKSLIIIDELGRGTSTYDGFGLAWAICEH 765
A +G + +STF + + ++I +T +SL+++DE+G GT+ +G L ++ E
Sbjct: 477 ADIGDEQSLSQSLSTFSGHLKQISNIKLQSTRQSLVLLDEVGAGTNPLEGAALGMSLLES 536
Query: 766 IVEVIKAPTLFATHFHELTALALENVSDDPHKQIVGVANYHVSAHIDESTRKLTMLYKVE 825
+ T+ TH EL L N A + DE K T YKV
Sbjct: 537 LAHGGCLLTIATTHHGELKTLKYSN-----------EAFENACMEFDEVNLKPT--YKVL 583
Query: 826 PGACDQSFGIHVAEFANFPESVVALARE 853
G +S I++AE P V+ AR+
Sbjct: 584 WGIPGRSNAINIAERLGLPSVVIDAARK 611
>Medtr5g068600.5 | DNA mismatch repair MUTS family protein | HC |
chr5:29054350-29067003 | 20130731
Length = 799
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 100/208 (48%), Gaps = 15/208 (7%)
Query: 647 IPNDCKLIRRKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFV-PCDKASISVRDCIF 705
+P D L+ K+ +ITGPN GGK+ ++ VG+ +MA+ G +V + I D +F
Sbjct: 418 VPVDF-LVSNKTRVIVITGPNTGGKTICLKTVGLAAMMAKSGLYVLASESVQIPWFDSVF 476
Query: 706 ARVGAGDCQLRGVSTFMQEMLETASILKGATDKSLIIIDELGRGTSTYDGFGLAWAICEH 765
A +G + +STF + + ++I +T +SL+++DE+G GT+ +G L ++ E
Sbjct: 477 ADIGDEQSLSQSLSTFSGHLKQISNIKLQSTRQSLVLLDEVGAGTNPLEGAALGMSLLES 536
Query: 766 IVEVIKAPTLFATHFHELTALALENVSDDPHKQIVGVANYHVSAHIDESTRKLTMLYKVE 825
+ T+ TH EL L N A + DE K T YKV
Sbjct: 537 LAHGGCLLTIATTHHGELKTLKYSN-----------EAFENACMEFDEVNLKPT--YKVL 583
Query: 826 PGACDQSFGIHVAEFANFPESVVALARE 853
G +S I++AE P V+ AR+
Sbjct: 584 WGIPGRSNAINIAERLGLPSVVIDAARK 611
>Medtr5g068600.2 | DNA mismatch repair MUTS family protein | HC |
chr5:29054350-29066879 | 20130731
Length = 799
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 100/208 (48%), Gaps = 15/208 (7%)
Query: 647 IPNDCKLIRRKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFV-PCDKASISVRDCIF 705
+P D L+ K+ +ITGPN GGK+ ++ VG+ +MA+ G +V + I D +F
Sbjct: 418 VPVDF-LVSNKTRVIVITGPNTGGKTICLKTVGLAAMMAKSGLYVLASESVQIPWFDSVF 476
Query: 706 ARVGAGDCQLRGVSTFMQEMLETASILKGATDKSLIIIDELGRGTSTYDGFGLAWAICEH 765
A +G + +STF + + ++I +T +SL+++DE+G GT+ +G L ++ E
Sbjct: 477 ADIGDEQSLSQSLSTFSGHLKQISNIKLQSTRQSLVLLDEVGAGTNPLEGAALGMSLLES 536
Query: 766 IVEVIKAPTLFATHFHELTALALENVSDDPHKQIVGVANYHVSAHIDESTRKLTMLYKVE 825
+ T+ TH EL L N A + DE K T YKV
Sbjct: 537 LAHGGCLLTIATTHHGELKTLKYSN-----------EAFENACMEFDEVNLKPT--YKVL 583
Query: 826 PGACDQSFGIHVAEFANFPESVVALARE 853
G +S I++AE P V+ AR+
Sbjct: 584 WGIPGRSNAINIAERLGLPSVVIDAARK 611
>Medtr5g068600.1 | DNA mismatch repair MUTS family protein | HC |
chr5:29054350-29066750 | 20130731
Length = 799
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 100/208 (48%), Gaps = 15/208 (7%)
Query: 647 IPNDCKLIRRKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFV-PCDKASISVRDCIF 705
+P D L+ K+ +ITGPN GGK+ ++ VG+ +MA+ G +V + I D +F
Sbjct: 418 VPVDF-LVSNKTRVIVITGPNTGGKTICLKTVGLAAMMAKSGLYVLASESVQIPWFDSVF 476
Query: 706 ARVGAGDCQLRGVSTFMQEMLETASILKGATDKSLIIIDELGRGTSTYDGFGLAWAICEH 765
A +G + +STF + + ++I +T +SL+++DE+G GT+ +G L ++ E
Sbjct: 477 ADIGDEQSLSQSLSTFSGHLKQISNIKLQSTRQSLVLLDEVGAGTNPLEGAALGMSLLES 536
Query: 766 IVEVIKAPTLFATHFHELTALALENVSDDPHKQIVGVANYHVSAHIDESTRKLTMLYKVE 825
+ T+ TH EL L N A + DE K T YKV
Sbjct: 537 LAHGGCLLTIATTHHGELKTLKYSN-----------EAFENACMEFDEVNLKPT--YKVL 583
Query: 826 PGACDQSFGIHVAEFANFPESVVALARE 853
G +S I++AE P V+ AR+
Sbjct: 584 WGIPGRSNAINIAERLGLPSVVIDAARK 611
>Medtr5g068600.4 | DNA mismatch repair MUTS family protein | HC |
chr5:29054350-29067003 | 20130731
Length = 799
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 100/208 (48%), Gaps = 15/208 (7%)
Query: 647 IPNDCKLIRRKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFV-PCDKASISVRDCIF 705
+P D L+ K+ +ITGPN GGK+ ++ VG+ +MA+ G +V + I D +F
Sbjct: 418 VPVDF-LVSNKTRVIVITGPNTGGKTICLKTVGLAAMMAKSGLYVLASESVQIPWFDSVF 476
Query: 706 ARVGAGDCQLRGVSTFMQEMLETASILKGATDKSLIIIDELGRGTSTYDGFGLAWAICEH 765
A +G + +STF + + ++I +T +SL+++DE+G GT+ +G L ++ E
Sbjct: 477 ADIGDEQSLSQSLSTFSGHLKQISNIKLQSTRQSLVLLDEVGAGTNPLEGAALGMSLLES 536
Query: 766 IVEVIKAPTLFATHFHELTALALENVSDDPHKQIVGVANYHVSAHIDESTRKLTMLYKVE 825
+ T+ TH EL L N A + DE K T YKV
Sbjct: 537 LAHGGCLLTIATTHHGELKTLKYSN-----------EAFENACMEFDEVNLKPT--YKVL 583
Query: 826 PGACDQSFGIHVAEFANFPESVVALARE 853
G +S I++AE P V+ AR+
Sbjct: 584 WGIPGRSNAINIAERLGLPSVVIDAARK 611
>Medtr5g068600.3 | DNA mismatch repair MUTS family protein | HC |
chr5:29054350-29067003 | 20130731
Length = 799
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 100/208 (48%), Gaps = 15/208 (7%)
Query: 647 IPNDCKLIRRKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFV-PCDKASISVRDCIF 705
+P D L+ K+ +ITGPN GGK+ ++ VG+ +MA+ G +V + I D +F
Sbjct: 418 VPVDF-LVSNKTRVIVITGPNTGGKTICLKTVGLAAMMAKSGLYVLASESVQIPWFDSVF 476
Query: 706 ARVGAGDCQLRGVSTFMQEMLETASILKGATDKSLIIIDELGRGTSTYDGFGLAWAICEH 765
A +G + +STF + + ++I +T +SL+++DE+G GT+ +G L ++ E
Sbjct: 477 ADIGDEQSLSQSLSTFSGHLKQISNIKLQSTRQSLVLLDEVGAGTNPLEGAALGMSLLES 536
Query: 766 IVEVIKAPTLFATHFHELTALALENVSDDPHKQIVGVANYHVSAHIDESTRKLTMLYKVE 825
+ T+ TH EL L N A + DE K T YKV
Sbjct: 537 LAHGGCLLTIATTHHGELKTLKYSN-----------EAFENACMEFDEVNLKPT--YKVL 583
Query: 826 PGACDQSFGIHVAEFANFPESVVALARE 853
G +S I++AE P V+ AR+
Sbjct: 584 WGIPGRSNAINIAERLGLPSVVIDAARK 611
>Medtr4g088920.1 | DNA mismatch repair protein MutS2 | HC |
chr4:35517782-35512675 | 20130731
Length = 913
Score = 71.2 bits (173), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 106/214 (49%), Gaps = 16/214 (7%)
Query: 647 IPNDCKLIRRKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDKA-SISVRDCIF 705
+P D K IR + +I+GPN GGK+ ++ +G+ LM++ G +P K+ + D I
Sbjct: 414 VPVDFK-IRSGTRVVVISGPNTGGKTASMKTLGLASLMSKAGMHLPAKKSPKLPWFDLIL 472
Query: 706 ARVGAGDCQLRGVSTFMQEMLETASILKGATDKSLIIIDELGRGTSTYDGFGLAWAICEH 765
+G + +STF + L+ A+ +SL++IDE+G GT +G L+ +I ++
Sbjct: 473 VDIGDHQSLEQNLSTFSGHISRIRKFLEVASKQSLVLIDEIGSGTDPSEGVALSASILQY 532
Query: 766 IVEVIKAPTLFATHFHELTALALENVSDDPHKQIVGVANYHVSAHIDESTRKLTMLYKVE 825
+ E + + TH+ +L+ + ++ + +A ++ S L Y+V
Sbjct: 533 LREHVNL-AVVTTHYADLSTMKEKDTCFE-------------NAAMEFSLETLQPTYRVL 578
Query: 826 PGACDQSFGIHVAEFANFPESVVALAREKAAELE 859
G S + +A+ F ++++ A++ +L+
Sbjct: 579 WGCTGDSNALSIAQSIGFDKNIIDHAQKWVEKLK 612