Miyakogusa Predicted Gene

Lj4g3v1787030.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1787030.1 tr|Q1WK55|Q1WK55_LOTJA CYC5 OS=Lotus japonicus
PE=2 SV=1,98.91,0,TCP,Transcription factor TCP subgroup; R,CYC/TB1, R
domain; TCP,Transcription factor, TCP; seg,NULL,CUFF.49715.1
         (388 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g111935.1 | TCP family transcription factor | HC | chr4:46...   240   2e-63
Medtr7g018500.1 | TCP family transcription factor | HC | chr7:60...    86   9e-17
Medtr6g017055.1 | TCP family transcription factor | HC | chr6:67...    82   7e-16
Medtr1g103380.1 | TCP family transcription factor | HC | chr1:46...    77   2e-14
Medtr7g015010.1 | TCP family transcription factor | HC | chr7:45...    66   7e-11
Medtr8g463380.1 | TCP family transcription factor | HC | chr8:22...    65   9e-11
Medtr2g078200.1 | TCP family transcription factor | HC | chr2:32...    65   1e-10
Medtr6g015350.1 | TCP family transcription factor | HC | chr6:50...    65   1e-10
Medtr4g079580.1 | TCP family transcription factor | HC | chr4:30...    64   2e-10
Medtr2g090960.2 | TCP family transcription factor | HC | chr2:39...    64   3e-10
Medtr2g090960.1 | TCP family transcription factor | HC | chr2:39...    64   3e-10
Medtr3g026050.1 | TCP family transcription factor | HC | chr3:79...    62   1e-09
Medtr4g109660.1 | TCP family transcription factor | HC | chr4:45...    57   4e-08

>Medtr4g111935.1 | TCP family transcription factor | HC |
           chr4:46280786-46279251 | 20130731
          Length = 388

 Score =  240 bits (612), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 177/387 (45%), Positives = 207/387 (53%), Gaps = 52/387 (13%)

Query: 33  SFESNLTS-KDETNC--------PLSLLQFP------YSPFEDHENIFPEQHHDFSLQQH 77
           SFESN TS KD  N         P S  QFP        PF+D   IF +QH D   Q H
Sbjct: 23  SFESNSTSSKDIENSHSPFPLPSPFSFFQFPNYPDDDIDPFQDSHQIFLQQH-DVDFQLH 81

Query: 78  QSLPEPVVNNNM--------DASINNNKNNSIPGTCSVVGKG-TATEQVAVXXXXXXXXX 128
              P  V+NNN         +++I  N NN +P      GKG T  +Q            
Sbjct: 82  H--PPVVMNNNSTDHHQRPSNSTIKAN-NNLLPA---AAGKGKTVVDQQIQRKRSSKRDR 135

Query: 129 XXXINTARGLRDRRMRLSLEVAKRFFGLQDMLGFDKASKTVDWLLNQAKVEIKHLAREKN 188
              I TA+GLRDRRMRLSLEVAKRFFGLQDMLGF+KASKTVDWLLNQ+K+EIK LAREKN
Sbjct: 136 HSKIKTAKGLRDRRMRLSLEVAKRFFGLQDMLGFEKASKTVDWLLNQSKLEIKLLAREKN 195

Query: 189 LHHPXXXXXXXXXXXXXXXXXXXLDEVVISENQEQEKEQQPIVKRR--ANKVCRKSAFNA 246
           ++ P                   LD  V   NQE+ ++Q+ ++KRR   NKVCRKSAFN+
Sbjct: 196 VNFP---TKSASSTSECTEGVSSLDNEV--GNQEEPQQQKLVMKRRNSTNKVCRKSAFNS 250

Query: 247 IGXXXXXXXXXXXXXXXXXXXXX-ADDKESKQCKEVTNHNLNLWNPFETVEESAGTHQSQ 305
           IG                       D+  SKQ  E       +WNPFE+VEESAGTHQS 
Sbjct: 251 IGREKARERARERTKEKRKARTSLVDESNSKQYNEEGIKTNLIWNPFESVEESAGTHQST 310

Query: 306 SVNNHPSLD---LLAEAEKEPSSQ-AKENSGTVVDDDMSHEDSFLIMSKWSPTMMFNSLS 361
               HPS D   L+ EAE E SSQ AKE      D+D    +S  IMSKWSP MMFNSL+
Sbjct: 311 QGVTHPSFDHVKLIDEAEVETSSQKAKEQHS---DED----NSLFIMSKWSPPMMFNSLN 363

Query: 362 NSEILQEHQFAEFQPLGKQWEAYNNRI 388
           N  + Q       Q + K WEAYNNRI
Sbjct: 364 N--LQQHQFEQFHQSMEKPWEAYNNRI 388


>Medtr7g018500.1 | TCP family transcription factor | HC |
           chr7:6031315-6033168 | 20130731
          Length = 374

 Score = 85.5 bits (210), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 36/57 (63%), Positives = 49/57 (85%)

Query: 132 INTARGLRDRRMRLSLEVAKRFFGLQDMLGFDKASKTVDWLLNQAKVEIKHLAREKN 188
           I+T++GLRDRR+RLS+E+A++FF LQDMLGFDKAS T++WL N++K  I+ L R KN
Sbjct: 127 IHTSQGLRDRRVRLSIEIARKFFDLQDMLGFDKASNTLEWLFNKSKEAIEELTRSKN 183


>Medtr6g017055.1 | TCP family transcription factor | HC |
           chr6:6710788-6713192 | 20130731
          Length = 409

 Score = 82.4 bits (202), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 35/56 (62%), Positives = 46/56 (82%)

Query: 132 INTARGLRDRRMRLSLEVAKRFFGLQDMLGFDKASKTVDWLLNQAKVEIKHLAREK 187
           I T++GLRDRR+RLS+E+A++FF LQDMLGFDKAS T+DWL  ++K  IK L + K
Sbjct: 133 IYTSQGLRDRRVRLSIEIARKFFDLQDMLGFDKASNTLDWLFTKSKKAIKDLTKSK 188


>Medtr1g103380.1 | TCP family transcription factor | HC |
           chr1:46797920-46794627 | 20130731
          Length = 489

 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 34/57 (59%), Positives = 45/57 (78%)

Query: 132 INTARGLRDRRMRLSLEVAKRFFGLQDMLGFDKASKTVDWLLNQAKVEIKHLAREKN 188
           I+T++GLRDRR+RLS E+A++FF LQDML FDK S T++WL  ++   IK LAR KN
Sbjct: 208 IHTSQGLRDRRVRLSSEIARKFFDLQDMLEFDKPSNTLEWLFTKSDTAIKELARTKN 264


>Medtr7g015010.1 | TCP family transcription factor | HC |
           chr7:4515349-4517203 | 20130731
          Length = 351

 Score = 65.9 bits (159), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 29/50 (58%), Positives = 36/50 (72%)

Query: 134 TARGLRDRRMRLSLEVAKRFFGLQDMLGFDKASKTVDWLLNQAKVEIKHL 183
           T RGLRDRR+RLS+  A + + LQD LG ++ SK VDWLLN AK +I  L
Sbjct: 66  TIRGLRDRRVRLSVPTAIQLYDLQDRLGLNQPSKVVDWLLNAAKQDIDQL 115


>Medtr8g463380.1 | TCP family transcription factor | HC |
           chr8:22326723-22329800 | 20130731
          Length = 433

 Score = 65.5 bits (158), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 28/53 (52%), Positives = 38/53 (71%)

Query: 132 INTARGLRDRRMRLSLEVAKRFFGLQDMLGFDKASKTVDWLLNQAKVEIKHLA 184
           + TA+G RDRR+RLS   A +F+ +QD LG+D+ SK VDWL+ +AK  I  LA
Sbjct: 61  VCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAIDELA 113


>Medtr2g078200.1 | TCP family transcription factor | HC |
           chr2:32505911-32507609 | 20130731
          Length = 294

 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 29/53 (54%), Positives = 38/53 (71%)

Query: 132 INTARGLRDRRMRLSLEVAKRFFGLQDMLGFDKASKTVDWLLNQAKVEIKHLA 184
           + TA+G RDRR+RLS   A  F+ +QD LGFD+ SK +DWL+N+AK  I  LA
Sbjct: 27  VCTAKGPRDRRVRLSAHTAIEFYDVQDRLGFDRPSKALDWLINKAKPAIDQLA 79


>Medtr6g015350.1 | TCP family transcription factor | HC |
           chr6:5010976-5013085 | 20130731
          Length = 333

 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 29/52 (55%), Positives = 37/52 (71%)

Query: 132 INTARGLRDRRMRLSLEVAKRFFGLQDMLGFDKASKTVDWLLNQAKVEIKHL 183
           + T +GLRDRR+RLS++ A   + LQD LG ++ SK VDWLLN AK EI  L
Sbjct: 56  VYTIKGLRDRRVRLSIQTAIHLYDLQDRLGLNQPSKVVDWLLNIAKDEIDEL 107


>Medtr4g079580.1 | TCP family transcription factor | HC |
           chr4:30768533-30767465 | 20130731
          Length = 335

 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 27/53 (50%), Positives = 37/53 (69%)

Query: 132 INTARGLRDRRMRLSLEVAKRFFGLQDMLGFDKASKTVDWLLNQAKVEIKHLA 184
           + T++G RDRR+RLS   A  F+ +QD LG+D+ SK VDWL+ +AK  I  LA
Sbjct: 29  VYTSKGPRDRRVRLSAHTAIEFYDVQDRLGYDRPSKAVDWLIKKAKSSIDKLA 81


>Medtr2g090960.2 | TCP family transcription factor | HC |
           chr2:39078457-39076249 | 20130731
          Length = 329

 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 27/52 (51%), Positives = 37/52 (71%)

Query: 132 INTARGLRDRRMRLSLEVAKRFFGLQDMLGFDKASKTVDWLLNQAKVEIKHL 183
           + TA+G RDRR+RLS   A +F+ +QD LG+D+ SK VDWL+ +AK  I  L
Sbjct: 31  VYTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAIDKL 82


>Medtr2g090960.1 | TCP family transcription factor | HC |
           chr2:39078457-39075847 | 20130731
          Length = 329

 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 27/52 (51%), Positives = 37/52 (71%)

Query: 132 INTARGLRDRRMRLSLEVAKRFFGLQDMLGFDKASKTVDWLLNQAKVEIKHL 183
           + TA+G RDRR+RLS   A +F+ +QD LG+D+ SK VDWL+ +AK  I  L
Sbjct: 31  VYTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAIDKL 82


>Medtr3g026050.1 | TCP family transcription factor | HC |
           chr3:7969037-7970349 | 20130731
          Length = 385

 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 26/52 (50%), Positives = 35/52 (67%)

Query: 132 INTARGLRDRRMRLSLEVAKRFFGLQDMLGFDKASKTVDWLLNQAKVEIKHL 183
           + T RGLRDRR+RLS+  A + + LQD LG  + SK +DWLL   K++I  L
Sbjct: 64  VCTIRGLRDRRIRLSVPTAIQLYDLQDKLGLGQPSKVIDWLLEATKLDIDKL 115


>Medtr4g109660.1 | TCP family transcription factor | HC |
           chr4:45588798-45589718 | 20130731
          Length = 306

 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 24/52 (46%), Positives = 34/52 (65%)

Query: 132 INTARGLRDRRMRLSLEVAKRFFGLQDMLGFDKASKTVDWLLNQAKVEIKHL 183
           + T RGLRDRR+RLS+  A + + LQD LG  + SK V+WL+   + +I  L
Sbjct: 63  VCTIRGLRDRRIRLSVPTAIQLYDLQDRLGLSQPSKVVEWLIEATQSDIDKL 114