Miyakogusa Predicted Gene

Lj4g3v1784870.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1784870.2 Non Characterized Hit- tr|K3XMF4|K3XMF4_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si003077,38.89,8e-19,Usp,UspA; no description,Rossmann-like
alpha/beta/alpha sandwich fold; Adenine nucleotide alpha
hydr,CUFF.49709.2
         (199 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g055760.1 | universal stress family protein | HC | chr2:23...   198   3e-51
Medtr5g047050.1 | adenine nucleotide alpha hydrolase superfamily...    59   3e-09
Medtr4g109880.1 | adenine nucleotide alpha hydrolase superfamily...    53   2e-07

>Medtr2g055760.1 | universal stress family protein | HC |
           chr2:23923081-23919756 | 20130731
          Length = 203

 Score =  198 bits (504), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 108/184 (58%), Positives = 128/184 (69%), Gaps = 12/184 (6%)

Query: 15  AARTALLWALHNIIRYGDIITLIHVYPLTRTKTKN------KARLLRLKGFQLALSFQEI 68
           AARTAL WAL NIIRYGDIITL+HVY  + T+++       KARLLRL GF+LALSFQ+I
Sbjct: 15  AARTALKWALINIIRYGDIITLLHVYNSSNTRSRRRSRSRSKARLLRLDGFRLALSFQDI 74

Query: 69  CNNFSNTKVEIVVAEEDREGMKVVAMVKEIKPSMLVVGLHDHSFIYKLAMEH--KSIASY 126
           CN++ NTKVEI+V E + EG K+ A V+EI  SMLVVGLHDHSF+YKLAM H   SI+S 
Sbjct: 75  CNDYPNTKVEIIVTEGENEGTKIAATVREIGASMLVVGLHDHSFLYKLAMAHSQNSISSN 134

Query: 127 FNCRVLAIKQXXXXXXXXXXXXXXXXXXXTEMDFSQIHICRLQVSDTLPQKVKYRICPDP 186
           FNCRVLAIKQ                   T +DFS I I  LQV  +  QK+ YRICP+P
Sbjct: 135 FNCRVLAIKQ----PTHHGDQLSPMIDSSTNLDFSHIDISTLQVPHSPSQKIPYRICPNP 190

Query: 187 AAII 190
           +AII
Sbjct: 191 SAII 194


>Medtr5g047050.1 | adenine nucleotide alpha hydrolase superfamily
           protein | HC | chr5:20628606-20630623 | 20130731
          Length = 236

 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 64/120 (53%), Gaps = 5/120 (4%)

Query: 4   RNIAVVVEDVDAARTALLWALHNIIRYGDIITLIHVYPLTRTK--TKNKA--RLLRLKGF 59
           R I +V++    A+ AL WAL + ++  D I L+HV   + +K  T ++A  +    + +
Sbjct: 67  RKIMIVIDSSFEAKGALQWALTHTVQNQDTIVLLHVMKPSNSKQATDDEASSKETDPRAY 126

Query: 60  QLALSFQEICN-NFSNTKVEIVVAEEDREGMKVVAMVKEIKPSMLVVGLHDHSFIYKLAM 118
           +LA SF+ ICN      ++EI V E   +G K+V   K    ++LV+G    S  ++L M
Sbjct: 127 ELASSFKNICNVKMPEVQIEIAVTEGKEKGPKIVEEAKRQGVALLVLGQKKRSTTWRLLM 186


>Medtr4g109880.1 | adenine nucleotide alpha hydrolase superfamily
           protein | HC | chr4:45722672-45724227 | 20130731
          Length = 222

 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 56/110 (50%), Gaps = 2/110 (1%)

Query: 6   IAVVVEDVDAARTALLWALHNIIRYGDIITLIHVYPLTRTKTKNKARLLRLKGFQLALSF 65
           + VVV+    A+ AL WAL + I+  D + L+HV    R   ++  +   LK +QL L  
Sbjct: 60  VMVVVDSSFEAKGALDWALSHTIQSQDTVVLVHVARPLREGDESDVK-FNLKAYQLLLDM 118

Query: 66  QEICNNFS-NTKVEIVVAEEDREGMKVVAMVKEIKPSMLVVGLHDHSFIY 114
           + +C        V IV+ E D +G  +V   K+ + S+LVVG    S ++
Sbjct: 119 KSMCEMKKLGVLVNIVLLEGDEKGAAIVQEAKQQRVSLLVVGQRKRSLLW 168