Miyakogusa Predicted Gene

Lj4g3v1784850.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1784850.1 tr|C1FHC3|C1FHC3_MICSR Predicted protein
(Fragment) OS=Micromonas sp. (strain RCC299 / NOUM17)
GN=MI,45.8,2e-17,Cyclophilin-like,Cyclophilin-like peptidyl-prolyl
cis-trans isomerase domain; Pro_isomerase,Cyclophi,CUFF.49778.1
         (329 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g111720.1 | peptidyl-prolyl cis-trans isomerase | HC | chr...   444   e-125
Medtr1g085560.1 | peptidyl-prolyl cis-trans isomerase | HC | chr...    65   1e-10
Medtr1g117010.2 | peptidyl-prolyl cis-trans isomerase | HC | chr...    64   2e-10
Medtr1g117010.1 | peptidyl-prolyl cis-trans isomerase | HC | chr...    64   2e-10
Medtr3g070500.1 | peptidyl-prolyl cis-trans isomerase | HC | chr...    60   3e-09
Medtr3g070500.3 | peptidyl-prolyl cis-trans isomerase | HC | chr...    59   8e-09
Medtr3g070500.4 | peptidyl-prolyl cis-trans isomerase | HC | chr...    57   3e-08
Medtr3g117750.1 | peptidyl-prolyl cis-trans isomerase | HC | chr...    57   3e-08
Medtr3g070500.2 | peptidyl-prolyl cis-trans isomerase | HC | chr...    57   3e-08
Medtr7g110980.1 | peptidyl-prolyl cis-trans isomerase | HC | chr...    56   6e-08
Medtr3g463900.1 | peptidyl-prolyl cis-trans isomerase | HC | chr...    55   1e-07
Medtr4g073650.1 | peptidyl-prolyl cis-trans isomerase | HC | chr...    53   5e-07

>Medtr4g111720.1 | peptidyl-prolyl cis-trans isomerase | HC |
           chr4:46158654-46157334 | 20130731
          Length = 322

 Score =  444 bits (1143), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 230/331 (69%), Positives = 255/331 (77%), Gaps = 11/331 (3%)

Query: 1   MLQNPRVLGSSPQPFNHXXXXXXXXXXXXXXXXXXXXI--IKQQCRLSRRELTIXXXXXX 58
           MLQ+PRVL SSPQPFN                        +KQQCRLSRREL I      
Sbjct: 1   MLQHPRVLRSSPQPFNPSSHTSTPSHSSFQQLPTTPHFPNLKQQCRLSRRELAIYSNTCL 60

Query: 59  XXXXGAQAVDGTKARAEENVVEPSNSDKPEENLTTTTTPSCTERKPTKKVFFDIAIDREP 118
                     G++ARA E+V   +NSDK  E+LT T  PSCTERKPTK+VFFD++IDREP
Sbjct: 61  L----LLLGSGSRARAAEDV---TNSDKLGEDLTKT--PSCTERKPTKQVFFDVSIDREP 111

Query: 119 VGRITIGLYGDDVPAGVDRFSKIVSGAAGVSYRRKEFVKILPNYVQHGGLRSYGVDAEMA 178
           VGR+TI LYGDDVPAGV+RFSKIVSGAAG+SYRRKEFVKI+PNYVQHGGLRSYGVDAE+A
Sbjct: 112 VGRVTIELYGDDVPAGVERFSKIVSGAAGISYRRKEFVKIMPNYVQHGGLRSYGVDAELA 171

Query: 179 RGTGGDLAADSLVEEWERTYEGCPGTKNVAGSVGIIVRDPSKPPPKMKLVARMGKLEIDQ 238
             TG +LA + LVEEWE  YE CPGTKNVAGSVGIIVRDPSKPPPK KLVAR+GKLEIDQ
Sbjct: 172 NKTGSNLATEKLVEEWESVYEKCPGTKNVAGSVGIIVRDPSKPPPKFKLVARLGKLEIDQ 231

Query: 239 EEVGIDPNGTEFVIATKDSPELDASSXXXXXXXXXXXXXQRIGQVKTVQENTSSPYFRVA 298
           EEVG DPNGTEFVIATKDSPELDAS+             Q+I QVKTVQENTSSPYFRVA
Sbjct: 232 EEVGTDPNGTEFVIATKDSPELDASTLVIGRVVGGMEFVQKISQVKTVQENTSSPYFRVA 291

Query: 299 KLIGDKRAVVAERGFNRPYSKVIVTNCGIME 329
           KLIGDKRAVVAERGFNRPYSKV++TNCG+++
Sbjct: 292 KLIGDKRAVVAERGFNRPYSKVVITNCGVIQ 322


>Medtr1g085560.1 | peptidyl-prolyl cis-trans isomerase | HC |
           chr1:38219712-38222377 | 20130731
          Length = 251

 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 6/92 (6%)

Query: 92  TTTTTPSCTERKPTKKVFFDIAIDREPVGRITIGLYGDDVPAGVDRFSKIVSGAAGVSYR 151
           T++   +  + K T KVFFD+ I  E  GRI IGL+GD VP  V+ F  + +G  G  Y+
Sbjct: 71  TSSANAADLQAKVTSKVFFDVVIGGESAGRIVIGLFGDVVPKTVENFRALCTGEKGYGYK 130

Query: 152 RKEFVKILPNYVQHGGLRSYGVDAEMARGTGG 183
              F +I+ +++  GG      D     GTGG
Sbjct: 131 DSTFHRIIKDFMIQGG------DFTEGNGTGG 156


>Medtr1g117010.2 | peptidyl-prolyl cis-trans isomerase | HC |
           chr1:52947034-52942152 | 20130731
          Length = 244

 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/229 (25%), Positives = 95/229 (41%), Gaps = 64/229 (27%)

Query: 101 ERKPTKKVFFDIAIDR---EPVGRITIGLYGDDVPAGVDRFSKIVSGAAGVSYRRKEFVK 157
           + K T KVFFD++I     + VGRI IGL+GDDVP  V+ F  + +G  G  Y+   F +
Sbjct: 72  QSKVTHKVFFDVSIGNPVGKLVGRIVIGLFGDDVPQTVENFRALSTGEKGFGYKSSTFHR 131

Query: 158 ILPNYVQHGGLRSYGVDAEMARGTGGDLAADSLVEEWERTYEGCPGTKNVAGSVGIIVRD 217
           ++ +++  GG      D +   GTGG          + RT++     +N           
Sbjct: 132 VIKDFMIQGG------DFDKGNGTGGK-------SIYGRTFK----DENFN--------- 165

Query: 218 PSKPPPKMKLVARMGKLEIDQEEVGIDPNGTEFVIATKDSPELDASSXXXXXXXXXXXXX 277
                     ++  G   +     G + NG++F I T  +P LD                
Sbjct: 166 ----------LSHTGPGAVSMANAGPNTNGSQFFICTVKTPWLDQRHVV----------- 204

Query: 278 QRIGQVKTVQENTSSPYFRVAKLIGDKRAVVAERGFNRPYSKVIVTNCG 326
              GQV    +        + +LI  +     +RG +RP  KV +++CG
Sbjct: 205 --FGQVLEGMD--------IVRLIESQE---TDRG-DRPLKKVTISDCG 239


>Medtr1g117010.1 | peptidyl-prolyl cis-trans isomerase | HC |
           chr1:52947034-52934517 | 20130731
          Length = 244

 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/229 (25%), Positives = 95/229 (41%), Gaps = 64/229 (27%)

Query: 101 ERKPTKKVFFDIAIDR---EPVGRITIGLYGDDVPAGVDRFSKIVSGAAGVSYRRKEFVK 157
           + K T KVFFD++I     + VGRI IGL+GDDVP  V+ F  + +G  G  Y+   F +
Sbjct: 72  QSKVTHKVFFDVSIGNPVGKLVGRIVIGLFGDDVPQTVENFRALSTGEKGFGYKSSTFHR 131

Query: 158 ILPNYVQHGGLRSYGVDAEMARGTGGDLAADSLVEEWERTYEGCPGTKNVAGSVGIIVRD 217
           ++ +++  GG      D +   GTGG          + RT++     +N           
Sbjct: 132 VIKDFMIQGG------DFDKGNGTGGK-------SIYGRTFK----DENFN--------- 165

Query: 218 PSKPPPKMKLVARMGKLEIDQEEVGIDPNGTEFVIATKDSPELDASSXXXXXXXXXXXXX 277
                     ++  G   +     G + NG++F I T  +P LD                
Sbjct: 166 ----------LSHTGPGAVSMANAGPNTNGSQFFICTVKTPWLDQRHVV----------- 204

Query: 278 QRIGQVKTVQENTSSPYFRVAKLIGDKRAVVAERGFNRPYSKVIVTNCG 326
              GQV    +        + +LI  +     +RG +RP  KV +++CG
Sbjct: 205 --FGQVLEGMD--------IVRLIESQE---TDRG-DRPLKKVTISDCG 239


>Medtr3g070500.1 | peptidyl-prolyl cis-trans isomerase | HC |
           chr3:31635225-31631615 | 20130731
          Length = 233

 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 78/196 (39%), Gaps = 45/196 (22%)

Query: 75  EENVVEPSNSDKPEENLTTTTTPSCTERKPTKKVFFDIAIDREPVGRITIGLYGDDVPAG 134
           E    + S+ DK + +  + T         T KV+FD+ ID + VGRI +GL+G  VP  
Sbjct: 33  ENGTHQASSHDKIQNHHHSDTLLEDDLEGVTNKVYFDVEIDGKSVGRIVMGLFGTTVPKT 92

Query: 135 VDRFSKIVSGAAGV-------SYRRKEFVKILPNYVQHGGLRSYGVDAEMARGTGGD-LA 186
            + F  + +G  GV        Y+   F +I+P+++  GG      D     G GG+ + 
Sbjct: 93  AENFRALCTGEKGVGKSGNPLHYKGSAFHRIIPSFMVQGG------DFTSGDGRGGESIY 146

Query: 187 ADSLVEEWERTYEGCPGTKNVAGSVGIIVRDPSKPPPKMKLVARMGKLEIDQEEVGIDPN 246
            D   +E  +     PG  ++A S                               G D N
Sbjct: 147 GDKFADENFKLKHTGPGYLSMANS-------------------------------GQDTN 175

Query: 247 GTEFVIATKDSPELDA 262
           G++F I T  +  LD 
Sbjct: 176 GSQFFITTVKTSWLDG 191


>Medtr3g070500.3 | peptidyl-prolyl cis-trans isomerase | HC |
           chr3:31635225-31631630 | 20130731
          Length = 188

 Score = 58.5 bits (140), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 41/144 (28%), Positives = 66/144 (45%), Gaps = 14/144 (9%)

Query: 75  EENVVEPSNSDKPEENLTTTTTPSCTERKPTKKVFFDIAIDREPVGRITIGLYGDDVPAG 134
           E    + S+ DK + +  + T         T KV+FD+ ID + VGRI +GL+G  VP  
Sbjct: 33  ENGTHQASSHDKIQNHHHSDTLLEDDLEGVTNKVYFDVEIDGKSVGRIVMGLFGTTVPKT 92

Query: 135 VDRFSKIVSGAAGV-------SYRRKEFVKILPNYVQHGGLRSYGVDAEMARGTGGD-LA 186
            + F  + +G  GV        Y+   F +I+P+++  GG      D     G GG+ + 
Sbjct: 93  AENFRALCTGEKGVGKSGNPLHYKGSAFHRIIPSFMVQGG------DFTSGDGRGGESIY 146

Query: 187 ADSLVEEWERTYEGCPGTKNVAGS 210
            D   +E  +     PG  ++A S
Sbjct: 147 GDKFADENFKLKHTGPGYLSMANS 170


>Medtr3g070500.4 | peptidyl-prolyl cis-trans isomerase | HC |
           chr3:31635225-31631615 | 20130731
          Length = 170

 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 62/137 (45%), Gaps = 14/137 (10%)

Query: 75  EENVVEPSNSDKPEENLTTTTTPSCTERKPTKKVFFDIAIDREPVGRITIGLYGDDVPAG 134
           E    + S+ DK + +  + T         T KV+FD+ ID + VGRI +GL+G  VP  
Sbjct: 33  ENGTHQASSHDKIQNHHHSDTLLEDDLEGVTNKVYFDVEIDGKSVGRIVMGLFGTTVPKT 92

Query: 135 VDRFSKIVSGAAGV-------SYRRKEFVKILPNYVQHGGLRSYGVDAEMARGTGGD-LA 186
            + F  + +G  GV        Y+   F +I+P+++  GG      D     G GG+ + 
Sbjct: 93  AENFRALCTGEKGVGKSGNPLHYKGSAFHRIIPSFMVQGG------DFTSGDGRGGESIY 146

Query: 187 ADSLVEEWERTYEGCPG 203
            D   +E  +     PG
Sbjct: 147 GDKFADENFKLKHTGPG 163


>Medtr3g117750.1 | peptidyl-prolyl cis-trans isomerase | HC |
           chr3:55138179-55139030 | 20130731
          Length = 191

 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 55/111 (49%), Gaps = 16/111 (14%)

Query: 107 KVFFDIAIDREPVGRITIGLYGDDVPAGVDRFSKIVSGAAGVS-------YRRKEFVKIL 159
           KVFFD+ +  EPVGRI + LY D  P   D F  + +G  G+        Y+   F +++
Sbjct: 13  KVFFDMTVGDEPVGRIVMELYADTTPLTADNFRALCTGEKGLGSSGKPLHYKGSTFHRVI 72

Query: 160 PNYVQHGGLRSYGVDAEMARGTGGDLAADSLV--EEWERTYEGCPGTKNVA 208
           P+++  GG      D     GTGG+    S    E + +T+ G PG  ++A
Sbjct: 73  PDFMCQGG------DFTAGNGTGGESIYGSKFADENFIKTHTG-PGVLSMA 116


>Medtr3g070500.2 | peptidyl-prolyl cis-trans isomerase | HC |
           chr3:31635225-31631615 | 20130731
          Length = 167

 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 57/121 (47%), Gaps = 8/121 (6%)

Query: 75  EENVVEPSNSDKPEENLTTTTTPSCTERKPTKKVFFDIAIDREPVGRITIGLYGDDVPAG 134
           E    + S+ DK + +  + T         T KV+FD+ ID + VGRI +GL+G  VP  
Sbjct: 33  ENGTHQASSHDKIQNHHHSDTLLEDDLEGVTNKVYFDVEIDGKSVGRIVMGLFGTTVPKT 92

Query: 135 VDRFSKIVSGAAGV-------SYRRKEFVKILPNYVQHGGLRSYGVDAEMARGTGGDLAA 187
            + F  + +G  GV        Y+   F +I+P+++  GG  + G D        GD  A
Sbjct: 93  AENFRALCTGEKGVGKSGNPLHYKGSAFHRIIPSFMVQGGDFTSG-DGRGGESIYGDKFA 151

Query: 188 D 188
           D
Sbjct: 152 D 152


>Medtr7g110980.1 | peptidyl-prolyl cis-trans isomerase | HC |
           chr7:45503066-45505731 | 20130731
          Length = 261

 Score = 55.8 bits (133), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 65/162 (40%), Gaps = 38/162 (23%)

Query: 101 ERKPTKKVFFDIAIDREPVGRITIGLYGDDVPAGVDRFSKIVSGAAGVSYRRKEFVKILP 160
           + K T K FFD+    E +GRI +GL+G+  P  V+ F  + +G  G  Y+   F +I+ 
Sbjct: 91  QAKVTTKCFFDVEAGGESLGRIVLGLFGEVAPKTVENFRALCTGDKGYGYKGCSFHRIIK 150

Query: 161 NYVQHGGLRSYGVDAEMARGTGG-DLAADSLVEEWERTYEGCPGTKNVAGSVGIIVRDPS 219
            ++  GG      D     GTGG  +   S  +E        PG  ++A +         
Sbjct: 151 EFMIQGG------DFTEGNGTGGVSIYGSSFEDESFALKHVGPGVLSMANA--------- 195

Query: 220 KPPPKMKLVARMGKLEIDQEEVGIDPNGTEFVIATKDSPELD 261
                                 G + NG++F I T  +P LD
Sbjct: 196 ----------------------GPNTNGSQFFICTVKTPWLD 215


>Medtr3g463900.1 | peptidyl-prolyl cis-trans isomerase | HC |
           chr3:25644296-25640419 | 20130731
          Length = 203

 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/170 (24%), Positives = 71/170 (41%), Gaps = 45/170 (26%)

Query: 101 ERKPTKKVFFDIAIDREPVGRITIGLYGDDVPAGVDRFSKIVSGAAGVS-------YRRK 153
           +++ T KV+FD+ ID +  GR+ IGL+G  VP   + F  + +G  G+        Y+  
Sbjct: 29  DKEVTNKVYFDVQIDGKDAGRVVIGLFGKTVPKTAENFRALCTGEKGIGKSGKPLHYKGS 88

Query: 154 EFVKILPNYVQHGGLRSYGVDAEMARGTGGD-LAADSLVEEWERTYEGCPGTKNVAGSVG 212
            F +I+P+++  GG  ++G       G GG+ +  +   +E  +     PG  ++A    
Sbjct: 89  SFHRIIPSFMIQGGDFTHG------NGMGGESIYGEKFADENFKLKHTGPGFLSMA---- 138

Query: 213 IIVRDPSKPPPKMKLVARMGKLEIDQEEVGIDPNGTEFVIATKDSPELDA 262
                                        G D NG++F I T  +  LD 
Sbjct: 139 ---------------------------NAGPDTNGSQFFITTVTTSWLDG 161


>Medtr4g073650.1 | peptidyl-prolyl cis-trans isomerase | HC |
           chr4:27939887-27936010 | 20130731
          Length = 223

 Score = 52.8 bits (125), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 30/77 (38%), Positives = 43/77 (55%), Gaps = 9/77 (11%)

Query: 100 TERKP--TKKVFFDIAIDREPVGRITIGLYGDDVPAGVDRFSKIVSGAAG-------VSY 150
           TE +P  T +VF DI ID++ +GRI IGLYG  VP  V+ F  + +G  G       + Y
Sbjct: 38  TEEEPEITHRVFLDIDIDKQRLGRIVIGLYGQVVPKTVENFRALCTGEKGESASGVKLHY 97

Query: 151 RRKEFVKILPNYVQHGG 167
           +   F +I+  +V  GG
Sbjct: 98  KGTPFHRIVSGFVIQGG 114