Miyakogusa Predicted Gene

Lj4g3v1748330.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1748330.1 Non Characterized Hit- tr|G7JT41|G7JT41_MEDTR
Putative uncharacterized protein OS=Medicago truncatul,90.13,0,B5,tRNA
synthetase, B5-domain; pheT_arch: phenylalanine--tRNA ligase, beta
subuni,Phenylalanyl-tRNA ,CUFF.49704.1
         (485 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g112680.2 | phenylalanyl-tRNA synthetase beta chain | HC |...   843   0.0  
Medtr4g112680.3 | phenylalanyl-tRNA synthetase beta chain | HC |...   841   0.0  
Medtr4g112680.1 | phenylalanyl-tRNA synthetase beta chain | HC |...   841   0.0  
Medtr5g077610.1 | phenylalanyl-tRNA synthetase beta chain | HC |...   410   e-114

>Medtr4g112680.2 | phenylalanyl-tRNA synthetase beta chain | HC |
           chr4:45941704-45949859 | 20130731
          Length = 589

 Score =  843 bits (2178), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 409/464 (88%), Positives = 430/464 (92%), Gaps = 1/464 (0%)

Query: 1   MPTVSVGRDRLYAALGRTYTQEEFEDLCFSFGIELDDVTTEKAIVRKXXXXXXXXXXXXX 60
           MPT+SVGRDRL+AALG+TYTQEEFEDLCFSFGIELDDVTTEKAIVRK             
Sbjct: 1   MPTISVGRDRLFAALGKTYTQEEFEDLCFSFGIELDDVTTEKAIVRKEKHLEKEADEDEE 60

Query: 61  XVIYKIEVPANRYDLLCLEGLAQALRVFCGFQEIPTYKLADVGKDAMLKMHVKPETKKIR 120
            +IYKIE+PANRYDLLCLEGLAQALRVFCGFQEIPTY L+D+ KDAMLKMHVKPET  IR
Sbjct: 61  -IIYKIEIPANRYDLLCLEGLAQALRVFCGFQEIPTYILSDISKDAMLKMHVKPETSLIR 119

Query: 121 EFIVCAVLRGITFDKARYNSFIDLQDKLHQNICRRRTLVAIGTHDLDTLEGPFTYEALSP 180
             +VCAVLRG+TFDK RYNSFIDLQDKLHQNICRRRTLVAIGTHDLD LEGPFTYEAL P
Sbjct: 120 PHVVCAVLRGLTFDKVRYNSFIDLQDKLHQNICRRRTLVAIGTHDLDKLEGPFTYEALPP 179

Query: 181 SSINFTPLKQERSFSAEKLMEFYKSDMKLKKFLHIIEKSDVYPVIYDSKRRVLSLPPIIN 240
           SSINFTPLKQERSF A++LMEFYKSD+KLKKFLHIIE S VYPVIYDSKR VLSLPPIIN
Sbjct: 180 SSINFTPLKQERSFRADELMEFYKSDLKLKKFLHIIEDSPVYPVIYDSKRTVLSLPPIIN 239

Query: 241 GAHSAITLETKNVFIECTATDLTKAKIVLNTMVTAFSEFCENKFVIEPVEVINSEGKSEI 300
           GAHSAITL+TKNVFIECTATDLTKAKIVLNTMVTAF+E+CENKFVIEPVEVI+S+GKS I
Sbjct: 240 GAHSAITLDTKNVFIECTATDLTKAKIVLNTMVTAFAEYCENKFVIEPVEVISSDGKSHI 299

Query: 301 YPDLSVYNMEVSLSYINGLIGVSLEAEEVTKFLNRMQLHAKQSTSDKKQCNFVVSVPPTR 360
           YPDLSVYNMEVSLSYI GLIGVSLEAEEVTKFLNRMQLHAKQSTSD KQCNF+VSVPPTR
Sbjct: 300 YPDLSVYNMEVSLSYITGLIGVSLEAEEVTKFLNRMQLHAKQSTSDNKQCNFIVSVPPTR 359

Query: 361 SDVLHPCDVMEDVAIAYGFNAIKDKAIVDNKGSKRLAASLTLLPLNEISDLIRKEVTMIG 420
           SDVLHPCDVMEDVAIAYGFNAIKD+AIVDNKGSKRLAASLTLLPLNE+SDLIRKEV MIG
Sbjct: 360 SDVLHPCDVMEDVAIAYGFNAIKDQAIVDNKGSKRLAASLTLLPLNELSDLIRKEVAMIG 419

Query: 421 FTEVLTFILCSKKENFAMLNRKDDKSKAVIIGNPRSSDFEETST 464
           FTEVLTFILCSKKENF+MLNRKDDKSKAVIIGNPRSSDFE   T
Sbjct: 420 FTEVLTFILCSKKENFSMLNRKDDKSKAVIIGNPRSSDFEAVRT 463


>Medtr4g112680.3 | phenylalanyl-tRNA synthetase beta chain | HC |
           chr4:45941704-45950260 | 20130731
          Length = 601

 Score =  841 bits (2173), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 409/464 (88%), Positives = 430/464 (92%), Gaps = 1/464 (0%)

Query: 1   MPTVSVGRDRLYAALGRTYTQEEFEDLCFSFGIELDDVTTEKAIVRKXXXXXXXXXXXXX 60
           MPT+SVGRDRL+AALG+TYTQEEFEDLCFSFGIELDDVTTEKAIVRK             
Sbjct: 1   MPTISVGRDRLFAALGKTYTQEEFEDLCFSFGIELDDVTTEKAIVRKEKHLEKEADEDEE 60

Query: 61  XVIYKIEVPANRYDLLCLEGLAQALRVFCGFQEIPTYKLADVGKDAMLKMHVKPETKKIR 120
            +IYKIE+PANRYDLLCLEGLAQALRVFCGFQEIPTY L+D+ KDAMLKMHVKPET  IR
Sbjct: 61  -IIYKIEIPANRYDLLCLEGLAQALRVFCGFQEIPTYILSDISKDAMLKMHVKPETSLIR 119

Query: 121 EFIVCAVLRGITFDKARYNSFIDLQDKLHQNICRRRTLVAIGTHDLDTLEGPFTYEALSP 180
             +VCAVLRG+TFDK RYNSFIDLQDKLHQNICRRRTLVAIGTHDLD LEGPFTYEAL P
Sbjct: 120 PHVVCAVLRGLTFDKVRYNSFIDLQDKLHQNICRRRTLVAIGTHDLDKLEGPFTYEALPP 179

Query: 181 SSINFTPLKQERSFSAEKLMEFYKSDMKLKKFLHIIEKSDVYPVIYDSKRRVLSLPPIIN 240
           SSINFTPLKQERSF A++LMEFYKSD+KLKKFLHIIE S VYPVIYDSKR VLSLPPIIN
Sbjct: 180 SSINFTPLKQERSFRADELMEFYKSDLKLKKFLHIIEDSPVYPVIYDSKRTVLSLPPIIN 239

Query: 241 GAHSAITLETKNVFIECTATDLTKAKIVLNTMVTAFSEFCENKFVIEPVEVINSEGKSEI 300
           GAHSAITL+TKNVFIECTATDLTKAKIVLNTMVTAF+E+CENKFVIEPVEVI+S+GKS I
Sbjct: 240 GAHSAITLDTKNVFIECTATDLTKAKIVLNTMVTAFAEYCENKFVIEPVEVISSDGKSHI 299

Query: 301 YPDLSVYNMEVSLSYINGLIGVSLEAEEVTKFLNRMQLHAKQSTSDKKQCNFVVSVPPTR 360
           YPDLSVYNMEVSLSYI GLIGVSLEAEEVTKFLNRMQLHAKQSTSD KQCNF+VSVPPTR
Sbjct: 300 YPDLSVYNMEVSLSYITGLIGVSLEAEEVTKFLNRMQLHAKQSTSDNKQCNFIVSVPPTR 359

Query: 361 SDVLHPCDVMEDVAIAYGFNAIKDKAIVDNKGSKRLAASLTLLPLNEISDLIRKEVTMIG 420
           SDVLHPCDVMEDVAIAYGFNAIKD+AIVDNKGSKRLAASLTLLPLNE+SDLIRKEV MIG
Sbjct: 360 SDVLHPCDVMEDVAIAYGFNAIKDQAIVDNKGSKRLAASLTLLPLNELSDLIRKEVAMIG 419

Query: 421 FTEVLTFILCSKKENFAMLNRKDDKSKAVIIGNPRSSDFEETST 464
           FTEVLTFILCSKKENF+MLNRKDDKSKAVIIGNPRSSDFE   T
Sbjct: 420 FTEVLTFILCSKKENFSMLNRKDDKSKAVIIGNPRSSDFEAVRT 463


>Medtr4g112680.1 | phenylalanyl-tRNA synthetase beta chain | HC |
           chr4:45941704-45950260 | 20130731
          Length = 601

 Score =  841 bits (2173), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 409/464 (88%), Positives = 430/464 (92%), Gaps = 1/464 (0%)

Query: 1   MPTVSVGRDRLYAALGRTYTQEEFEDLCFSFGIELDDVTTEKAIVRKXXXXXXXXXXXXX 60
           MPT+SVGRDRL+AALG+TYTQEEFEDLCFSFGIELDDVTTEKAIVRK             
Sbjct: 1   MPTISVGRDRLFAALGKTYTQEEFEDLCFSFGIELDDVTTEKAIVRKEKHLEKEADEDEE 60

Query: 61  XVIYKIEVPANRYDLLCLEGLAQALRVFCGFQEIPTYKLADVGKDAMLKMHVKPETKKIR 120
            +IYKIE+PANRYDLLCLEGLAQALRVFCGFQEIPTY L+D+ KDAMLKMHVKPET  IR
Sbjct: 61  -IIYKIEIPANRYDLLCLEGLAQALRVFCGFQEIPTYILSDISKDAMLKMHVKPETSLIR 119

Query: 121 EFIVCAVLRGITFDKARYNSFIDLQDKLHQNICRRRTLVAIGTHDLDTLEGPFTYEALSP 180
             +VCAVLRG+TFDK RYNSFIDLQDKLHQNICRRRTLVAIGTHDLD LEGPFTYEAL P
Sbjct: 120 PHVVCAVLRGLTFDKVRYNSFIDLQDKLHQNICRRRTLVAIGTHDLDKLEGPFTYEALPP 179

Query: 181 SSINFTPLKQERSFSAEKLMEFYKSDMKLKKFLHIIEKSDVYPVIYDSKRRVLSLPPIIN 240
           SSINFTPLKQERSF A++LMEFYKSD+KLKKFLHIIE S VYPVIYDSKR VLSLPPIIN
Sbjct: 180 SSINFTPLKQERSFRADELMEFYKSDLKLKKFLHIIEDSPVYPVIYDSKRTVLSLPPIIN 239

Query: 241 GAHSAITLETKNVFIECTATDLTKAKIVLNTMVTAFSEFCENKFVIEPVEVINSEGKSEI 300
           GAHSAITL+TKNVFIECTATDLTKAKIVLNTMVTAF+E+CENKFVIEPVEVI+S+GKS I
Sbjct: 240 GAHSAITLDTKNVFIECTATDLTKAKIVLNTMVTAFAEYCENKFVIEPVEVISSDGKSHI 299

Query: 301 YPDLSVYNMEVSLSYINGLIGVSLEAEEVTKFLNRMQLHAKQSTSDKKQCNFVVSVPPTR 360
           YPDLSVYNMEVSLSYI GLIGVSLEAEEVTKFLNRMQLHAKQSTSD KQCNF+VSVPPTR
Sbjct: 300 YPDLSVYNMEVSLSYITGLIGVSLEAEEVTKFLNRMQLHAKQSTSDNKQCNFIVSVPPTR 359

Query: 361 SDVLHPCDVMEDVAIAYGFNAIKDKAIVDNKGSKRLAASLTLLPLNEISDLIRKEVTMIG 420
           SDVLHPCDVMEDVAIAYGFNAIKD+AIVDNKGSKRLAASLTLLPLNE+SDLIRKEV MIG
Sbjct: 360 SDVLHPCDVMEDVAIAYGFNAIKDQAIVDNKGSKRLAASLTLLPLNELSDLIRKEVAMIG 419

Query: 421 FTEVLTFILCSKKENFAMLNRKDDKSKAVIIGNPRSSDFEETST 464
           FTEVLTFILCSKKENF+MLNRKDDKSKAVIIGNPRSSDFE   T
Sbjct: 420 FTEVLTFILCSKKENFSMLNRKDDKSKAVIIGNPRSSDFEAVRT 463


>Medtr5g077610.1 | phenylalanyl-tRNA synthetase beta chain | HC |
           chr5:33121939-33130472 | 20130731
          Length = 524

 Score =  410 bits (1054), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 196/238 (82%), Positives = 210/238 (88%)

Query: 1   MPTVSVGRDRLYAALGRTYTQEEFEDLCFSFGIELDDVTTEKAIVRKXXXXXXXXXXXXX 60
           MPTVSVGRDRL+AALG+TYTQEEFEDLCFSFGIELDDVTTEKAIVRK             
Sbjct: 1   MPTVSVGRDRLFAALGKTYTQEEFEDLCFSFGIELDDVTTEKAIVRKEKHLEQEEADEDE 60

Query: 61  XVIYKIEVPANRYDLLCLEGLAQALRVFCGFQEIPTYKLADVGKDAMLKMHVKPETKKIR 120
            VIYKIE+PANRYDLLCLEGLAQALRVFCGFQEIPTYKLAD+ KDAM K+HVKPET  IR
Sbjct: 61  EVIYKIEIPANRYDLLCLEGLAQALRVFCGFQEIPTYKLADISKDAMHKIHVKPETSLIR 120

Query: 121 EFIVCAVLRGITFDKARYNSFIDLQDKLHQNICRRRTLVAIGTHDLDTLEGPFTYEALSP 180
            ++VCAVLRG+TFDKARYNSFIDLQDKLHQNICRRRTLVAIGTHDLD LEGPFTYEAL P
Sbjct: 121 PYVVCAVLRGLTFDKARYNSFIDLQDKLHQNICRRRTLVAIGTHDLDKLEGPFTYEALPP 180

Query: 181 SSINFTPLKQERSFSAEKLMEFYKSDMKLKKFLHIIEKSDVYPVIYDSKRRVLSLPPI 238
           SSINFTPLKQE+SF A++LMEFYKSD+KLKKFLHIIE S VYPVIYDSK + L + PI
Sbjct: 181 SSINFTPLKQEKSFRADELMEFYKSDLKLKKFLHIIEDSPVYPVIYDSKSQCLRIGPI 238



 Score =  260 bits (664), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 124/136 (91%), Positives = 130/136 (95%)

Query: 329 VTKFLNRMQLHAKQSTSDKKQCNFVVSVPPTRSDVLHPCDVMEDVAIAYGFNAIKDKAIV 388
           VTKFLNRMQLHAKQSTSD KQCNF+VSVPPTRSDVLHPCDVMEDVAIAYGFNAIKD+AI+
Sbjct: 251 VTKFLNRMQLHAKQSTSDNKQCNFIVSVPPTRSDVLHPCDVMEDVAIAYGFNAIKDQAII 310

Query: 389 DNKGSKRLAASLTLLPLNEISDLIRKEVTMIGFTEVLTFILCSKKENFAMLNRKDDKSKA 448
           DNKGSKRLAASLTLLPL E+SDLIRKEV M+GFTEVLTFILCSKKENF+MLNRKDDKSKA
Sbjct: 311 DNKGSKRLAASLTLLPLQELSDLIRKEVAMVGFTEVLTFILCSKKENFSMLNRKDDKSKA 370

Query: 449 VIIGNPRSSDFEETST 464
           VIIGNPRSSDFE   T
Sbjct: 371 VIIGNPRSSDFEAVRT 386