Miyakogusa Predicted Gene

Lj4g3v1736170.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1736170.1 Non Characterized Hit- tr|D7MUF1|D7MUF1_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,30.4,4e-17,seg,NULL,gene.g55518.t1.1
         (266 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g461550.1 | hypothetical protein | LC | chr2:25412986-2541...   117   1e-26
Medtr4g109950.1 | hypothetical protein | LC | chr4:45745611-4574...   112   5e-25
Medtr4g109910.1 | hypothetical protein | LC | chr4:45734947-4573...    59   6e-09

>Medtr2g461550.1 | hypothetical protein | LC |
           chr2:25412986-25414759 | 20130731
          Length = 220

 Score =  117 bits (292), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 82/191 (42%), Positives = 111/191 (58%), Gaps = 14/191 (7%)

Query: 84  VENRIDGSTWSLSLDEDYIVFCFEENQEFGAVKDERSVKSENLMRGLNVMHKNSKPLNSK 143
           V+N  D     LS D++YIVF F E+  F    D  + KSE+    ++   +NSK ++ K
Sbjct: 36  VDNNGDSIRTVLS-DQEYIVFSFREDGSFDVDTDSIAAKSES--SSVDGKRENSKAVSRK 92

Query: 144 VKYGEGAKVVSKHNILVKRPNDSKEHDQDCY--------REDMEKEMVHTSRQKKRDSTS 195
           + Y E A+V ++H  + K  +++ +HD D +        +ED  KE +  S  + RD+  
Sbjct: 93  LDYNESAEVRNQH--IEKHISNANQHDTDQHDIVYLTPIKEDEAKETISLSSTQHRDNIG 150

Query: 196 SVCQVEGIEDCGGMVSAESRNSVQSEGSRGSFAFPVLGWEWIGSPVHMPRAEDVHLKNHK 255
             CQ E IED G +VS  SRNS QSEGSRGSFAFP L WE  GSPV MP++ED H+K  K
Sbjct: 151 RSCQKEEIED-GRLVSNNSRNSNQSEGSRGSFAFPELAWEMKGSPVKMPKSEDPHIKKQK 209

Query: 256 ASYVGFQCCMF 266
              VGFQC  F
Sbjct: 210 IRCVGFQCFRF 220


>Medtr4g109950.1 | hypothetical protein | LC |
           chr4:45745611-45747122 | 20130731
          Length = 307

 Score =  112 bits (279), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 78/190 (41%), Positives = 101/190 (53%), Gaps = 35/190 (18%)

Query: 75  MVKEKQGVSVENRIDGSTWSLSLDEDYIVFCFEENQEFGAVKDERSVKSENLMRGLNVMH 134
           MV +K GV   N+ D S+ S   D+DYIVFCF+++  F  VKD++             +H
Sbjct: 1   MVDDKNGVPTVNKFDESSRSFFPDDDYIVFCFDKDGPFDVVKDDKGC-----------VH 49

Query: 135 KNSKPLNSKVKYGEGAKVVSKHNILVKRPNDSKEHDQDCYREDMEKEMVHTSRQKKRDST 194
           K ++PL  +VKY E A  VS  NI  K  N +                 H + QK +D  
Sbjct: 50  KFARPLKLQVKYDEDADQVSNINIHNKISNTNH----------------HVTDQKDQDCR 93

Query: 195 SSVCQVEGIEDCGGMVSAESRNSVQSEGSRGSFAFPVLGWEWIGSPVHMPRAEDV-HLKN 253
               +VEGIED   M  A+SR+SVQSEGS  SFAFPVL WE IG+P  MP+ E   HLK 
Sbjct: 94  ----EVEGIEDYE-MSFAKSRDSVQSEGSTDSFAFPVLDWEGIGTPTQMPKPEGQHHLKK 148

Query: 254 HK--ASYVGF 261
            K  A++  F
Sbjct: 149 QKDTAAFPNF 158


>Medtr4g109910.1 | hypothetical protein | LC |
           chr4:45734947-45735873 | 20130731
          Length = 152

 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 31/56 (55%), Positives = 36/56 (64%), Gaps = 3/56 (5%)

Query: 209 MVSAESRNSVQSEGSRGSFAFPVLGWEWIGSPVHMPRAEDV-HLKNHK--ASYVGF 261
           M  AESR  VQSEGS  SFAFPVL WE IG+P  MP+ +   HLK  K  A++  F
Sbjct: 1   MTFAESRECVQSEGSTDSFAFPVLDWEGIGTPAQMPKPDGQHHLKKQKDTAAFPNF 56