Miyakogusa Predicted Gene

Lj4g3v1721970.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1721970.1 Non Characterized Hit- tr|J4IAF8|J4IAF8_9APHY
Uncharacterized protein OS=Fibroporia radiculosa PE=4
,31.3,2e-18,Rhomboid-like,NULL; no description,NULL; seg,NULL;
Rhomboid,Peptidase S54, rhomboid domain,CUFF.49657.1
         (330 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g109700.1 | S54 family peptidase | HC | chr4:45616780-4561...   341   7e-94

>Medtr4g109700.1 | S54 family peptidase | HC |
           chr4:45616780-45611349 | 20130731
          Length = 325

 Score =  341 bits (874), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 190/337 (56%), Positives = 231/337 (68%), Gaps = 19/337 (5%)

Query: 1   MQRLVRK-VVVTLPXXXXXXXQPNLSFNNSLRHRIFHTSGGS-----AHIHHHTPKPTQL 54
           MQ LVR+   VT         QPNL+FN    HRI HT   +     ++++HH P P+  
Sbjct: 1   MQSLVRRFTAVTRHHNNHHHLQPNLTFN---PHRISHTRPSTHIAQPSNLNHHIPSPSSA 57

Query: 55  GHPFHRFHSWHSSNSNHTKIRSCLSQP-IIAFNALRRISLLNCRPKPPALHXXXXXXXXX 113
            H + RF S        TKIRS  SQP I+  N L  +  +  R  P             
Sbjct: 58  IHSW-RFLS--------TKIRSSFSQPMIVRRNYLSSVKSIIDRRFPRVHFHRQNYISNW 108

Query: 114 XXXXXXXXXXXXLDTLTPDNMVFGLIIANTAIFLLWRIADEKFMINNFTISLDNIKSGRL 173
                       L+ LTP+++V GL++AN A+FL W+IA + FM+NNFTISLDNIK+GRL
Sbjct: 109 NNNSYRSGWKSWLNRLTPNDLVLGLVVANVAVFLFWKIATQDFMLNNFTISLDNIKNGRL 168

Query: 174 HTLITNAFSHVDAWHIISNMLGLYFFGTNVVSNFGPGFLLKLYLAGAVGGSVFYLVHQAY 233
           HTLITNAFSHVDAWH++SNMLGLYFFG+++ S FGP FLLKLYLAGA+GGSVFYL HQ+Y
Sbjct: 169 HTLITNAFSHVDAWHLMSNMLGLYFFGSSIASKFGPEFLLKLYLAGAIGGSVFYLGHQSY 228

Query: 234 KAQSSKGWRFSNHSKELALGASGAVNAVMLLQIFLFPKATIYFDLFIPVPAILLGVFMIG 293
           K+ +SKG+     SK+LALGASGAVNAVMLL IFL P+ATIY D FIPVPA LLG+F+IG
Sbjct: 229 KSLTSKGYGAIKASKDLALGASGAVNAVMLLDIFLNPRATIYLDFFIPVPAALLGIFLIG 288

Query: 294 KDMLRIMEGDTSISGSAHLGGATVGAIAWALVRKGRF 330
           KDMLRI+EGD++ISGSAHLGG  V AIAW+ VRKGRF
Sbjct: 289 KDMLRIIEGDSTISGSAHLGGMAVAAIAWSRVRKGRF 325