Miyakogusa Predicted Gene

Lj4g3v1721910.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1721910.1 Non Characterized Hit- tr|I1JWN6|I1JWN6_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,52.49,0,TCP,Transcription factor, TCP; TCP,Transcription factor
TCP subgroup; seg,NULL,CUFF.49640.1
         (363 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g026050.1 | TCP family transcription factor | HC | chr3:79...   225   5e-59
Medtr4g109660.1 | TCP family transcription factor | HC | chr4:45...   213   2e-55
Medtr7g015010.1 | TCP family transcription factor | HC | chr7:45...   156   3e-38
Medtr6g015350.1 | TCP family transcription factor | HC | chr6:50...   141   9e-34
Medtr4g079580.1 | TCP family transcription factor | HC | chr4:30...    97   3e-20
Medtr2g090960.2 | TCP family transcription factor | HC | chr2:39...    96   7e-20
Medtr2g090960.1 | TCP family transcription factor | HC | chr2:39...    96   7e-20
Medtr8g463380.1 | TCP family transcription factor | HC | chr8:22...    95   1e-19
Medtr2g078200.1 | TCP family transcription factor | HC | chr2:32...    91   1e-18
Medtr4g111935.1 | TCP family transcription factor | HC | chr4:46...    71   1e-12
Medtr6g017055.1 | TCP family transcription factor | HC | chr6:67...    70   3e-12
Medtr1g103380.1 | TCP family transcription factor | HC | chr1:46...    69   7e-12
Medtr7g018500.1 | TCP family transcription factor | HC | chr7:60...    68   2e-11

>Medtr3g026050.1 | TCP family transcription factor | HC |
           chr3:7969037-7970349 | 20130731
          Length = 385

 Score =  225 bits (573), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 171/388 (44%), Positives = 208/388 (53%), Gaps = 56/388 (14%)

Query: 1   MTENSSKGYDQMKQEGTNEVKTERLISSNKA-LSTSRQWT--AFRNPRIVRVSRALGGKD 57
           M  +S +G  Q KQEG  +   E +   +KA  STSRQW+  + RNPRIVRVSR  GGKD
Sbjct: 1   MMASSREGNYQAKQEG-GDTSMENIEKISKAPSSTSRQWSTSSLRNPRIVRVSRTFGGKD 59

Query: 58  RHSKVCTVRGLRDRRIRLSVPTAIELYDLQDRLGLSQPSKVVDWLLEASKTDIDKLPPLQ 117
           RHSKVCT+RGLRDRRIRLSVPTAI+LYDLQD+LGL QPSKV+DWLLEA+K DIDKLPPLQ
Sbjct: 60  RHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLGLGQPSKVIDWLLEATKLDIDKLPPLQ 119

Query: 118 IPNCSFSQFH---------HQDQYSGNDRLSLGVGGLFY-DGTSASSQSLMAKSRYNWDV 167
            P  SFSQFH           DQ S      L +G L+  + T    Q+LMA+S++ WD+
Sbjct: 120 FPQ-SFSQFHPLHSQTLLPFHDQSSNIASHELSLGPLYDPNSTFVGIQNLMARSKF-WDI 177

Query: 168 DLVSRLKGKEDE----SEKGKCLMKETQD--------------SAQKLFPIGINYNSSSS 209
           D  SR KGKE E    SEK K +    ++              S QKLFP+  + N    
Sbjct: 178 D--SRTKGKEVEREYFSEKDKWIKTNEEENQVGEASYNNFHQVSTQKLFPMETHSN---- 231

Query: 210 LPGFLNNAMTYNINXXXXXXXXXXXXXXXXXHGVLFPYLQPDSNSMLQYPSNNNGSVVPF 269
              FLNNAM+YN N                       + Q D N      SN NG   PF
Sbjct: 232 ---FLNNAMSYN-NYHSEASSLSLSQFGSSNGLFQSHHQQVDPNQ-----SNGNGLHFPF 282

Query: 270 XXXXXXXXXXFCPSSSATTPTSLFGNPHAPLMTNSSAESSDPRQYNSNHVHTLSSGSS-L 328
                          S+++ T    +  +    N+  E +DPR    NH   ++S SS  
Sbjct: 283 ----PFANSQLLFGPSSSSTTPSSSHLSSTPFMNNPVE-NDPR-IQFNHFQFINSSSSQT 336

Query: 329 MPHPFMPSLHPFSNSPLSRRLPTPFSSK 356
           MPHP +PS H   NSP  R  P PFSSK
Sbjct: 337 MPHPLIPSFHHSFNSPPVRPFPIPFSSK 364


>Medtr4g109660.1 | TCP family transcription factor | HC |
           chr4:45588798-45589718 | 20130731
          Length = 306

 Score =  213 bits (543), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 162/368 (44%), Positives = 204/368 (55%), Gaps = 68/368 (18%)

Query: 1   MTENSSKGYDQ--MKQEGTN-EVKTERLISSNKALSTSRQWTAFRNPRIVRVSRALGGKD 57
           M E+S K Y++   KQEG +  +++E+   SNKA++TSRQWT+ RNPRIVRVSR+LGGKD
Sbjct: 1   MIESSRKDYNKEATKQEGEHGRMESEKF--SNKAIATSRQWTSLRNPRIVRVSRSLGGKD 58

Query: 58  RHSKVCTVRGLRDRRIRLSVPTAIELYDLQDRLGLSQPSKVVDWLLEASKTDIDKLPPLQ 117
           RHSKVCT+RGLRDRRIRLSVPTAI+LYDLQDRLGLSQPSKVV+WL+EA+++DIDKLPPL 
Sbjct: 59  RHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDRLGLSQPSKVVEWLIEATQSDIDKLPPLD 118

Query: 118 IPNCSFSQFHHQDQYSGNDRLSLGVGGLFYDGTSASSQSLMAKSRYNWDVDLVSRLKGKE 177
           IP     Q     Q +G+   SLG G  FY                      +++ KGKE
Sbjct: 119 IPQSFTQQQTLFQQPAGSTCFSLGGG--FYG---------------------MNQTKGKE 155

Query: 178 DE-SEKGKCLMKETQDSAQKLFPIGINYNSSSSLPGFLNNAMTYNINXXXXXXXXXXXXX 236
            E SEKG         +    FP   N + SS+L                          
Sbjct: 156 AESSEKGNYYNTNNSSNG---FPFPYNLDPSSTL----------------------SLSQ 190

Query: 237 XXXXHGVLFPYLQPDSNSMLQYPSNNNGSV-VPFXXXXXXXXXXFCPSSSATTPTSLFGN 295
               HG LFP  Q  ++      S+++ ++ VP           FCP S    P+     
Sbjct: 191 FGSHHGNLFPSYQISTSGSGMQFSSSSSNLTVP--NSSGNSQLLFCP-SVMPLPSLFTST 247

Query: 296 PHAPLMTNSSAESSDPRQYNSNHVHTLSSGSSLMPHPFMPSLHPFSNSPLSRRLPTPFSS 355
            +AP M     ESSD  Q  SNHV  L+S S+     F+P++H   NSP  RR PT FSS
Sbjct: 248 LNAPSM-----ESSD-IQRQSNHVQILNSSSN---GSFIPTIHLPINSPF-RRHPTLFSS 297

Query: 356 KLLDSDNN 363
           KLLDSD+N
Sbjct: 298 KLLDSDHN 305


>Medtr7g015010.1 | TCP family transcription factor | HC |
           chr7:4515349-4517203 | 20130731
          Length = 351

 Score =  156 bits (394), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 77/124 (62%), Positives = 95/124 (76%), Gaps = 4/124 (3%)

Query: 1   MTENSSKGY--DQMKQEGTNEVKTERLISSNKALSTSRQWTAFRNPRIVRVSRALGGKDR 58
           M +NS + +   Q   + +N+ + E+  S + +   S QW   ++PRIVRVSRA GGKDR
Sbjct: 1   MNKNSKEDFPLKQEVHQNSNDHEKEKANSPSSSSLASSQWPRLKDPRIVRVSRAFGGKDR 60

Query: 59  HSKVCTVRGLRDRRIRLSVPTAIELYDLQDRLGLSQPSKVVDWLLEASKTDIDKLPPLQI 118
           HSKVCT+RGLRDRR+RLSVPTAI+LYDLQDRLGL+QPSKVVDWLL A+K DID+LPPL  
Sbjct: 61  HSKVCTIRGLRDRRVRLSVPTAIQLYDLQDRLGLNQPSKVVDWLLNAAKQDIDQLPPL-- 118

Query: 119 PNCS 122
           PN S
Sbjct: 119 PNFS 122


>Medtr6g015350.1 | TCP family transcription factor | HC |
           chr6:5010976-5013085 | 20130731
          Length = 333

 Score =  141 bits (356), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 63/88 (71%), Positives = 75/88 (85%)

Query: 37  QWTAFRNPRIVRVSRALGGKDRHSKVCTVRGLRDRRIRLSVPTAIELYDLQDRLGLSQPS 96
           QW   ++PRIVRVSRA G KDRHSKV T++GLRDRR+RLS+ TAI LYDLQDRLGL+QPS
Sbjct: 31  QWLKLKDPRIVRVSRAFGTKDRHSKVYTIKGLRDRRVRLSIQTAIHLYDLQDRLGLNQPS 90

Query: 97  KVVDWLLEASKTDIDKLPPLQIPNCSFS 124
           KVVDWLL  +K +ID+LPPLQIP  +F+
Sbjct: 91  KVVDWLLNIAKDEIDELPPLQIPQGNFT 118


>Medtr4g079580.1 | TCP family transcription factor | HC |
           chr4:30768533-30767465 | 20130731
          Length = 335

 Score = 96.7 bits (239), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 52/69 (75%)

Query: 48  RVSRALGGKDRHSKVCTVRGLRDRRIRLSVPTAIELYDLQDRLGLSQPSKVVDWLLEASK 107
            + RA G KDRHSKV T +G RDRR+RLS  TAIE YD+QDRLG  +PSK VDWL++ +K
Sbjct: 15  HIVRATGKKDRHSKVYTSKGPRDRRVRLSAHTAIEFYDVQDRLGYDRPSKAVDWLIKKAK 74

Query: 108 TDIDKLPPL 116
           + IDKL  L
Sbjct: 75  SSIDKLAEL 83


>Medtr2g090960.2 | TCP family transcription factor | HC |
           chr2:39078457-39076249 | 20130731
          Length = 329

 Score = 95.5 bits (236), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 46/78 (58%), Positives = 57/78 (73%), Gaps = 4/78 (5%)

Query: 49  VSRALGGKDRHSKVCTVRGLRDRRIRLSVPTAIELYDLQDRLGLSQPSKVVDWLLEASKT 108
           + RA G KDRHSKV T +G RDRR+RLS  TAI+ YD+QDRLG  +PSK VDWL++ +K+
Sbjct: 18  IVRATGRKDRHSKVYTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKS 77

Query: 109 DIDK---LPPLQ-IPNCS 122
            IDK   LPP   IPN +
Sbjct: 78  AIDKLDQLPPWNPIPNAT 95


>Medtr2g090960.1 | TCP family transcription factor | HC |
           chr2:39078457-39075847 | 20130731
          Length = 329

 Score = 95.5 bits (236), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 46/78 (58%), Positives = 57/78 (73%), Gaps = 4/78 (5%)

Query: 49  VSRALGGKDRHSKVCTVRGLRDRRIRLSVPTAIELYDLQDRLGLSQPSKVVDWLLEASKT 108
           + RA G KDRHSKV T +G RDRR+RLS  TAI+ YD+QDRLG  +PSK VDWL++ +K+
Sbjct: 18  IVRATGRKDRHSKVYTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKS 77

Query: 109 DIDK---LPPLQ-IPNCS 122
            IDK   LPP   IPN +
Sbjct: 78  AIDKLDQLPPWNPIPNAT 95


>Medtr8g463380.1 | TCP family transcription factor | HC |
           chr8:22326723-22329800 | 20130731
          Length = 433

 Score = 95.1 bits (235), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 41/68 (60%), Positives = 53/68 (77%)

Query: 49  VSRALGGKDRHSKVCTVRGLRDRRIRLSVPTAIELYDLQDRLGLSQPSKVVDWLLEASKT 108
           + R+ G KDRHSKVCT +G RDRR+RLS  TAI+ YD+QDRLG  +PSK VDWL++ +K+
Sbjct: 48  IVRSTGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKS 107

Query: 109 DIDKLPPL 116
            ID+L  L
Sbjct: 108 AIDELAHL 115


>Medtr2g078200.1 | TCP family transcription factor | HC |
           chr2:32505911-32507609 | 20130731
          Length = 294

 Score = 91.3 bits (225), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 41/68 (60%), Positives = 51/68 (75%)

Query: 49  VSRALGGKDRHSKVCTVRGLRDRRIRLSVPTAIELYDLQDRLGLSQPSKVVDWLLEASKT 108
           + R+ G KDRHSKVCT +G RDRR+RLS  TAIE YD+QDRLG  +PSK +DWL+  +K 
Sbjct: 14  IIRSRGRKDRHSKVCTAKGPRDRRVRLSAHTAIEFYDVQDRLGFDRPSKALDWLINKAKP 73

Query: 109 DIDKLPPL 116
            ID+L  L
Sbjct: 74  AIDQLAHL 81


>Medtr4g111935.1 | TCP family transcription factor | HC |
           chr4:46280786-46279251 | 20130731
          Length = 388

 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 32/58 (55%), Positives = 40/58 (68%)

Query: 56  KDRHSKVCTVRGLRDRRIRLSVPTAIELYDLQDRLGLSQPSKVVDWLLEASKTDIDKL 113
           +DRHSK+ T +GLRDRR+RLS+  A   + LQD LG  + SK VDWLL  SK +I  L
Sbjct: 133 RDRHSKIKTAKGLRDRRMRLSLEVAKRFFGLQDMLGFEKASKTVDWLLNQSKLEIKLL 190


>Medtr6g017055.1 | TCP family transcription factor | HC |
           chr6:6710788-6713192 | 20130731
          Length = 409

 Score = 70.1 bits (170), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 31/58 (53%), Positives = 39/58 (67%)

Query: 56  KDRHSKVCTVRGLRDRRIRLSVPTAIELYDLQDRLGLSQPSKVVDWLLEASKTDIDKL 113
           KDRHSK+ T +GLRDRR+RLS+  A + +DLQD LG  + S  +DWL   SK  I  L
Sbjct: 127 KDRHSKIYTSQGLRDRRVRLSIEIARKFFDLQDMLGFDKASNTLDWLFTKSKKAIKDL 184


>Medtr1g103380.1 | TCP family transcription factor | HC |
           chr1:46797920-46794627 | 20130731
          Length = 489

 Score = 68.9 bits (167), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 32/68 (47%), Positives = 42/68 (61%)

Query: 54  GGKDRHSKVCTVRGLRDRRIRLSVPTAIELYDLQDRLGLSQPSKVVDWLLEASKTDIDKL 113
           G KDRHSK+ T +GLRDRR+RLS   A + +DLQD L   +PS  ++WL   S T I +L
Sbjct: 200 GKKDRHSKIHTSQGLRDRRVRLSSEIARKFFDLQDMLEFDKPSNTLEWLFTKSDTAIKEL 259

Query: 114 PPLQIPNC 121
              +   C
Sbjct: 260 ARTKNAAC 267


>Medtr7g018500.1 | TCP family transcription factor | HC |
           chr7:6031315-6033168 | 20130731
          Length = 374

 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 29/57 (50%), Positives = 40/57 (70%)

Query: 57  DRHSKVCTVRGLRDRRIRLSVPTAIELYDLQDRLGLSQPSKVVDWLLEASKTDIDKL 113
           DRHSK+ T +GLRDRR+RLS+  A + +DLQD LG  + S  ++WL   SK  I++L
Sbjct: 122 DRHSKIHTSQGLRDRRVRLSIEIARKFFDLQDMLGFDKASNTLEWLFNKSKEAIEEL 178