Miyakogusa Predicted Gene

Lj4g3v1720890.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1720890.1 Non Characterized Hit- tr|D8T4T5|D8T4T5_SELML
Putative uncharacterized protein OS=Selaginella
moelle,35.11,0.0000000000003,seg,NULL,CUFF.49643.1
         (128 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g109650.1 | hypothetical protein | HC | chr4:45578296-4558...   155   1e-38

>Medtr4g109650.1 | hypothetical protein | HC |
           chr4:45578296-45582378 | 20130731
          Length = 126

 Score =  155 bits (391), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 78/128 (60%), Positives = 96/128 (75%), Gaps = 2/128 (1%)

Query: 1   MAKPASNSLLSGLRRFIKKPWEITGPCADPEYKLAVPAALEYRPFCPATPKEQAIIPSSL 60
           MAK AS SLL  L+ FIK PWEITGP + PE+K A+P AL+YRP+CPAT KE+AIIP+S 
Sbjct: 1   MAKSAS-SLLQKLKSFIKAPWEITGPVSHPEFKSALPGALDYRPYCPATTKEKAIIPTSD 59

Query: 61  PETVFDIKYHTXXXXXXXXXXXXTVLKKADVEKLMKERKTFDVSDFPPVYLNTVVIEDMD 120
           PETV+DIKY+T            T+ KKAD+EKL KE  T++V DFPP+Y N +V EDM+
Sbjct: 60  PETVYDIKYYTRDQRRNRPPIVRTIYKKADIEKLKKE-ATYNVEDFPPIYPNIIVEEDMN 118

Query: 121 ARGGGYQS 128
           ARGGGYQ+
Sbjct: 119 ARGGGYQN 126