Miyakogusa Predicted Gene

Lj4g3v1719790.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1719790.1 Non Characterized Hit- tr|B9RLN3|B9RLN3_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,39.83,9e-17,seg,NULL,CUFF.49628.1
         (498 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g109570.1 | hypothetical protein | HC | chr4:45540212-4554...   286   4e-77
Medtr3g025960.1 | hypothetical protein | LC | chr3:7925686-79280...   157   3e-38
Medtr5g045480.1 | hypothetical protein | LC | chr5:19954238-1995...    57   4e-08

>Medtr4g109570.1 | hypothetical protein | HC |
           chr4:45540212-45542412 | 20130731
          Length = 503

 Score =  286 bits (731), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 206/469 (43%), Positives = 258/469 (55%), Gaps = 60/469 (12%)

Query: 2   MEAGGENKTN-------ANKGPDPYPNIIEHELHHTFPLTEQEHGGPNINNKLEAHXXXX 54
           ME  G+NK N       A     P P           PLTEQE G  + NN LEAH    
Sbjct: 1   MEVKGDNKVNIDLRTGHATNAYQPPP-----------PLTEQELGRAS-NNPLEAHSHIP 48

Query: 55  XXXXXXXXXXXXXXXXQNPFLVPSDATNNTVYGGSSIGDE-TH--------HSPSNDVQG 105
                           QNPF+ PS+ATN+TV   ++IG   TH        HS +N +  
Sbjct: 49  DINQAPVTSLSSSF--QNPFIGPSEATNDTVEDDTNIGSSNTHIYNSPNEIHSSTNVISN 106

Query: 106 FPPSFAPSAAYETSSKGNPFHEPINTNNRVPHEALEPLQNQPPPAFENVPTHVDSHHPLQ 165
                +P++ YE S + + F+E  NTNN    + ++  Q QP P  + V T+V+SHHP +
Sbjct: 107 LN---SPTSTYELSQESS-FNEKTNTNNSDSDDVVKSWQTQPSPC-DIVSTNVESHHPFK 161

Query: 166 VTEQGQQSIMASNNLEKXXXXXXXXXXQEHINGFVNDINKPQTDTKSPPKLGVDSQVAEE 225
             E+GQQ +  + +             QE     +N  +    D      LG+ S++  E
Sbjct: 162 EIEKGQQGVDDTIHTGTSSFPTLESLNQEQTCASINVTSNANQD------LGLASRMVGE 215

Query: 226 SSDEDIPISAMDGPSSERKHGHSNDVXXXXXXXXXXXXXXXXXXXXTKKGPEIQTPPVQV 285
           S++ ++         SE  H HS DV                      KGPEIQ PP+Q+
Sbjct: 216 SNNNEV------ATKSEPNHQHS-DVAEHSTPTSSNQNIEHHKI----KGPEIQNPPIQL 264

Query: 286 MERPGES---SQYVFPSHVFARNNTNAPGEWSTASNESLFSIYMGNMSFSNELVCLKSCE 342
           MERP E+   +QYVFPSHVFARNNTNAP EWSTASNESLFSIYMGN SFS+EL C KS +
Sbjct: 265 MERPSENVTNAQYVFPSHVFARNNTNAPVEWSTASNESLFSIYMGNTSFSSELACFKSSD 324

Query: 343 LDKPGGDNNTNTHNDPQNALPTQQQPPAPVNKFNDISQRTAEMHEESSRLTEAKAAETMR 402
           LDK G        +D   A P   QPP PVNKFN IS+ TAE+HEE  ++TEAKAAETMR
Sbjct: 325 LDKSGDV----CMSDQYIASP-NHQPPVPVNKFNAISKGTAELHEEGLKVTEAKAAETMR 379

Query: 403 EVIMESSRTTENTSKKVERNSNSRNQSDGSTKSYAFKTSTEGDKSVSSK 451
           EVIMESS+TT+   KK ++ SNSR+QS GST SYAFKTS +GDKSVSSK
Sbjct: 380 EVIMESSQTTKYVVKKEDKKSNSRHQSHGSTGSYAFKTSKDGDKSVSSK 428


>Medtr3g025960.1 | hypothetical protein | LC | chr3:7925686-7928071
           | 20130731
          Length = 568

 Score =  157 bits (396), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 132/342 (38%), Positives = 168/342 (49%), Gaps = 73/342 (21%)

Query: 193 QEHINGFVNDINKPQTDTKSPPKLGVDSQVAEESSDEDIPISAMDGPSSERKHGHSNDVX 252
           Q+ +   +N  +  + DT   PK   D  +  ESSD+DI IS+M  P  E++   S+DV 
Sbjct: 259 QQRVQDSLNASSNTKEDTIVHPKSQTDIVLTSESSDDDIQISSM--PKHEKQ---SSDVD 313

Query: 253 XXXXXXXXXXXXXXXXXXXTKKGPEIQTPPVQVMER---PGESS-QYVFPSHVFARNNTN 308
                                    IQ  P+Q+MER   P  +S     PSHVF R  +N
Sbjct: 314 VPKT---------------------IQNLPIQMMERQEDPAATSPTDRIPSHVFNRTKSN 352

Query: 309 APGEWSTASNESLFSIYMGNMSFSNELVCL----------------KSCELDKPGGDNNT 352
              +WSTASNESLFSI+MG MSFSN++  L                KS ELDKP   N+ 
Sbjct: 353 --NQWSTASNESLFSIHMGTMSFSNDIAFLSKSGELDNPIDHNHLSKSSELDKPIDHNHN 410

Query: 353 NTHNDPQNALPTQQQPPAPV---NKFNDISQRTAEMHEESSRLTEAKAAETMREVIMESS 409
           +  +D      T   P  P     KFN ISQ   E  +  SR+TE KAAETMR+VIMESS
Sbjct: 411 HNISD---GFQTNHHPILPQPQGTKFNAISQNFGEQ-DGGSRVTEEKAAETMRQVIMESS 466

Query: 410 RTTENTSK------------KVERNSNSRN--QSDGSTKSYAFKTSTEGDKSVSSKSGRD 455
              E+ SK            K+  +SN+ +   SDGST+SYAFK  T+GDK+ S+K   D
Sbjct: 467 VKQESKSKGDTASATAAARSKLLSSSNNDHSPHSDGSTRSYAFKVMTDGDKTPSAKRNED 526

Query: 456 XXXXXX---XXXXXXTPIADEQTPKSTTNAPTNRFLQCFACC 494
                          TP A  Q PKST NA  N++L CF CC
Sbjct: 527 VRNQVKQPVQQNVKGTPAA-AQNPKSTPNASQNKWLSCFTCC 567


>Medtr5g045480.1 | hypothetical protein | LC |
           chr5:19954238-19951784 | 20130731
          Length = 389

 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 32/71 (45%), Positives = 41/71 (57%), Gaps = 7/71 (9%)

Query: 280 TPPVQVMERPGESSQYVFPSHVFARNNTNAPGEWSTASNESLFSIYMGNMSFSNELVCL- 338
           +PP+QVM+R         PS +F RN  N   +WS ASN+SLFSI++G  SFS +     
Sbjct: 124 SPPIQVMDRSARYDPARIPSSIFERNTNN---DWSIASNDSLFSIHIGQNSFSRDAFKFA 180

Query: 339 ---KSCELDKP 346
              KS EL KP
Sbjct: 181 EPRKSSELTKP 191