Miyakogusa Predicted Gene
- Lj4g3v1719740.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v1719740.2 Non Characterized Hit- tr|J3NEE5|J3NEE5_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB12G2,31.42,3e-18,seg,NULL; coiled-coil,NULL,CUFF.49624.2
(498 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr3g025870.1 | hypothetical protein | HC | chr3:7888175-78934... 348 5e-96
>Medtr3g025870.1 | hypothetical protein | HC | chr3:7888175-7893471
| 20130731
Length = 665
Score = 348 bits (894), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 220/477 (46%), Positives = 282/477 (59%), Gaps = 52/477 (10%)
Query: 24 DVDSVDGLLATELASIEGFDSEKVRCFRDCNESNVLSVSN-----------FSDVEDRND 72
DV S DG ++AS GF+ EK+R F++ NES+ LS+SN F D ED N+
Sbjct: 77 DVSSFDGPSTGDVASYRGFNCEKIRHFQNYNESDFLSISNLAVPLSPYDDNFKDGEDGNE 136
Query: 73 RSSNIGANCGFLLPDLSVGELGSFVHNP-GNKTFFKTEHWYGQXXXXXXXXXXXXXXXXX 131
++++ N GF P+ S G +HN G+KTF T+ +
Sbjct: 137 QNTSSFGNHGFFRPEFSAK--GIPIHNSFGHKTFLSTKRF---------------PEHVS 179
Query: 132 RPLNSLESCLMAQLCKAHAKMEQGVSS---SSSAVTKLFHVIDGSQIISRKDDDDDSCSA 188
RPLNSLESC MAQL K HAKME+ V S S S T+LF V +GS+I++R + D SA
Sbjct: 180 RPLNSLESCFMAQLYKEHAKMEEYVFSPLSSPSTTTRLFRVSNGSRILNR--ESDILISA 237
Query: 189 LIGSEEYKLRGEADQVKDENELLGVPASPKVESINDAKKMKSDAGIEKSGILSSSNIAFT 248
L G R +A + KD+N + G+P PK+ S+ND KKMK DA +S S S+ F+
Sbjct: 238 LTG------RNKAGREKDKNVVGGIPCLPKIGSLNDTKKMKLDAVDGRSRRSSFSDDLFS 291
Query: 249 EKHIHSQHDAIFLFSLGISFGIITSILANNREKDKLRELLKQTEILAQDLQEELEMKDSM 308
K +Q+D FLFSLGIS GIITS + N RE K+RELLKQ E L QDLQ+EL+MKDSM
Sbjct: 292 GKL--TQYDPTFLFSLGISLGIITSNMTNKREIVKIRELLKQNENLVQDLQDELDMKDSM 349
Query: 309 TVKELQSENYGSQDTCDYSFRDKELSGFFPEKHTDNSSIIDCKKFYDQKXXXXXXXXXXX 368
TVKELQ+ENYGSQDTCD+SF KEL F PEKH D+S ++ K+ YD+K
Sbjct: 350 TVKELQNENYGSQDTCDHSFNGKELHEFSPEKHIDSSPRVERKESYDKKEEQSSESMSKI 409
Query: 369 XXXXXXXXXRLGFKMNXXXXXXXXXXXAE-DTDFVADFSQNELPTDMISGNDFVHPKLNE 427
RLG MN E D +FVADF+Q E D ++G
Sbjct: 410 EAELEAELERLGLDMNASSLDRKLSELVEIDPEFVADFAQGEFRADTVNG---------A 460
Query: 428 DANNTKSFPVNYAVSPHELSLRLHEVIQSRLEKRVQELEVALQYSQRKLQFVESEHE 484
DAN T P NYAVSPHELSLRLHEVIQ++LE RV+ELE+AL+ SQ K++ +E+E +
Sbjct: 461 DANVTTPLPANYAVSPHELSLRLHEVIQNQLETRVKELEIALENSQMKVRSLETEQD 517