Miyakogusa Predicted Gene

Lj4g3v1719740.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1719740.2 Non Characterized Hit- tr|J3NEE5|J3NEE5_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB12G2,31.42,3e-18,seg,NULL; coiled-coil,NULL,CUFF.49624.2
         (498 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g025870.1 | hypothetical protein | HC | chr3:7888175-78934...   348   5e-96

>Medtr3g025870.1 | hypothetical protein | HC | chr3:7888175-7893471
           | 20130731
          Length = 665

 Score =  348 bits (894), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 220/477 (46%), Positives = 282/477 (59%), Gaps = 52/477 (10%)

Query: 24  DVDSVDGLLATELASIEGFDSEKVRCFRDCNESNVLSVSN-----------FSDVEDRND 72
           DV S DG    ++AS  GF+ EK+R F++ NES+ LS+SN           F D ED N+
Sbjct: 77  DVSSFDGPSTGDVASYRGFNCEKIRHFQNYNESDFLSISNLAVPLSPYDDNFKDGEDGNE 136

Query: 73  RSSNIGANCGFLLPDLSVGELGSFVHNP-GNKTFFKTEHWYGQXXXXXXXXXXXXXXXXX 131
           ++++   N GF  P+ S    G  +HN  G+KTF  T+ +                    
Sbjct: 137 QNTSSFGNHGFFRPEFSAK--GIPIHNSFGHKTFLSTKRF---------------PEHVS 179

Query: 132 RPLNSLESCLMAQLCKAHAKMEQGVSS---SSSAVTKLFHVIDGSQIISRKDDDDDSCSA 188
           RPLNSLESC MAQL K HAKME+ V S   S S  T+LF V +GS+I++R  + D   SA
Sbjct: 180 RPLNSLESCFMAQLYKEHAKMEEYVFSPLSSPSTTTRLFRVSNGSRILNR--ESDILISA 237

Query: 189 LIGSEEYKLRGEADQVKDENELLGVPASPKVESINDAKKMKSDAGIEKSGILSSSNIAFT 248
           L G      R +A + KD+N + G+P  PK+ S+ND KKMK DA   +S   S S+  F+
Sbjct: 238 LTG------RNKAGREKDKNVVGGIPCLPKIGSLNDTKKMKLDAVDGRSRRSSFSDDLFS 291

Query: 249 EKHIHSQHDAIFLFSLGISFGIITSILANNREKDKLRELLKQTEILAQDLQEELEMKDSM 308
            K   +Q+D  FLFSLGIS GIITS + N RE  K+RELLKQ E L QDLQ+EL+MKDSM
Sbjct: 292 GKL--TQYDPTFLFSLGISLGIITSNMTNKREIVKIRELLKQNENLVQDLQDELDMKDSM 349

Query: 309 TVKELQSENYGSQDTCDYSFRDKELSGFFPEKHTDNSSIIDCKKFYDQKXXXXXXXXXXX 368
           TVKELQ+ENYGSQDTCD+SF  KEL  F PEKH D+S  ++ K+ YD+K           
Sbjct: 350 TVKELQNENYGSQDTCDHSFNGKELHEFSPEKHIDSSPRVERKESYDKKEEQSSESMSKI 409

Query: 369 XXXXXXXXXRLGFKMNXXXXXXXXXXXAE-DTDFVADFSQNELPTDMISGNDFVHPKLNE 427
                    RLG  MN            E D +FVADF+Q E   D ++G          
Sbjct: 410 EAELEAELERLGLDMNASSLDRKLSELVEIDPEFVADFAQGEFRADTVNG---------A 460

Query: 428 DANNTKSFPVNYAVSPHELSLRLHEVIQSRLEKRVQELEVALQYSQRKLQFVESEHE 484
           DAN T   P NYAVSPHELSLRLHEVIQ++LE RV+ELE+AL+ SQ K++ +E+E +
Sbjct: 461 DANVTTPLPANYAVSPHELSLRLHEVIQNQLETRVKELEIALENSQMKVRSLETEQD 517